Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,242,942 Δ66 bp coding (510‑575/891 nt) malG ← maltose transporter subunit

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4242942 4243007 66 64 [1] [1] 64 malG maltose transporter subunit

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 42429411 (0.010)53 (0.680) 40/184 1.5 98.2% coding (576/891 nt) malG maltose transporter subunit
?NC_000913 4243008 = 1 (0.010)coding (509/891 nt) malG maltose transporter subunit

AATGGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4242836‑4242941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACC  >  NC_000913/4243008‑4243106
                                                                                                                                                                                                             
AATGGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCC                                                                                                           <  2:281275/100‑1
   ctCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                        <  1:1324633/98‑1
   GGCAGCGATAAACGACAGGATGCATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                        >  2:1186191/1‑100
   GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                        >  2:160386/1‑100
   GGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGC                                                                                                        >  1:1283532/1‑100
    GCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCG                                                                                                       <  2:201197/100‑1
    GCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCG                                                                                                       <  2:1170179/100‑1
    GCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCG                                                                                                       >  1:1635674/1‑100
     CAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCag                                                                                                      >  2:1324624/1‑98
     CAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGC                                                                                                      <  2:1464898/100‑1
     CAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGC                                                                                                      <  1:270753/100‑1
          ATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCC                                                                                                 <  1:1759684/100‑1
             AACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCAC                                                                                              <  1:1002574/100‑1
               CGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCC                                                                                            >  2:106836/1‑100
               CGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCC                                                                                            >  1:628361/1‑100
               CGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGCACCAGGCGGAAGGCCTGCCACGATGCCGCACGATCCAGCGCAATCCCA                                                                                               >  2:110052/1‑97
                    GGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATA                                                                                       >  2:789735/1‑100
                    GGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATA                                                                                       >  1:1851896/1‑100
                    GGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATA                                                                                       >  2:418910/1‑100
                    GGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAG                                                                                          >  2:268991/1‑97
                     GATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATAC                                                                                      <  1:1989617/100‑1
                      ATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACG                                                                                     >  2:532492/1‑100
                        GAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCG                                                                                   <  2:1283526/100‑1
                           TACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAA                                                                                >  2:309213/1‑100
                             CCACCGCCAGAATCGGTACTGACAGCGGCAACAGGTCAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAAT                                                                              >  1:341082/1‑100
                             CCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAAT                                                                              <  1:1607675/100‑1
                             CCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAAT                                                                              >  1:592788/1‑100
                             CCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAAT                                                                              <  1:495118/100‑1
                             CCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAA                                                                               >  1:184166/1‑99
                              CACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATT                                                                             >  2:1621454/1‑100
                              CACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATT                                                                             <  2:1084666/100‑1
                                CCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTAC                                                                           <  1:2016472/100‑1
                                CCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTAC                                                                           >  1:1356740/1‑100
                                          CGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGA                                                                 >  2:1469716/1‑100
                                            GTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGT                                                               >  1:547893/1‑100
                                                   CAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGG                                                        <  2:307689/100‑1
                                                     GCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCC                                                      <  2:869812/100‑1
                                                     GCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCC                                                      >  1:1403147/1‑100
                                                      CGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCA                                                     <  2:1115598/100‑1
                                                      CGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCA                                                     >  2:791733/1‑100
                                                       GGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAA                                                    <  1:789738/100‑1
                                                         CAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATG                                                  <  1:1186197/100‑1
                                                         CAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATG                                                  <  2:1635661/100‑1
                                                         CAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATG                                                  <  1:160387/100‑1
                                                             AGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCCATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATG                                              <  2:141369/100‑1
                                                              GGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGG                                             >  1:1718414/1‑100
                                                                 CAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAAT                                          <  2:1270426/100‑1
                                                                 CAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACCCGAAAATCACCCCGCCACGAGTATTCAGACCAATGAATGGAA                                           >  2:678148/1‑99
                                                                   AGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGT                                        >  1:987350/1‑100
                                                                   AGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGT                                        >  2:672408/1‑100
                                                                   AGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGT                                        <  1:418911/100‑1
                                                                   AGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGT                                        <  1:1880594/100‑1
                                                                         AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAC                                  <  2:1282819/100‑1
                                                                         AAGGCCTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCAC                                  <  2:1610368/100‑1
                                                                              CTGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGA                             >  1:341361/1‑100
                                                                               TGCCACGGTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGAC                            >  2:1365647/1‑100
                                                                                      GTGTCGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAA                     <  2:987346/100‑1
                                                                                          CGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAAC                 <  1:672410/100‑1
                                                                                          CGCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAAC                 >  1:1108947/1‑100
                                                                                           GCACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACG                <  2:1767058/100‑1
                                                                                            CACCATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGC               <  2:1356731/100‑1
                                                                                               CATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGACCATTCAGGCCAATGAATGGAATGTACTCACCCAGACGAACAAACAACGCATA            >  2:6147/1‑100
                                                                                                ATCCAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATAC           >  2:953650/1‑100
                                                                                                 TCCAGCGCAAACCCACACAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACA          <  1:602971/100‑1
                                                                                                   CAGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAAC        >  2:1888056/1‑100
                                                                                                    AGCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACG       <  2:547891/100‑1
                                                                                                     GCGCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGC      >  1:1023714/1‑100
                                                                                                       GCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGA    >  1:1581451/1‑100
                                                                                                       GCAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGA    >  1:1581447/1‑100
                                                                                                        CAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAC   <  2:341081/100‑1
                                                                                                        CAATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGAC   <  1:791736/100‑1
                                                                                                         AATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACC  <  2:592786/100‑1
                                                                                                         AATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACC  <  1:1409717/100‑1
                                                                                                         AATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACC  <  2:184165/100‑1
                                                                                                                                                                                                             
AATGGCAGCGATAAACGACAGGATGAATACCACCGCCAGAATCGGTACTGACAGCGGCAACAGGACAAGGCGGAAGGCCTGCCACGGTGTCGCACCATCCAGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4242836‑4242941
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgcaATCCCACCCAGATACGCGAAAATTACGCCGCCGTGAGTATTCAGGCCAATGAATGGAATGTACTCACCCAGACGATCAAACAACGCATACAACGCGACC  >  NC_000913/4243008‑4243106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.