| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1187036 = | NA (NA) | 9 (0.060) | 5/168 | NT | NA | coding (1193/1227 nt) | pepT | peptidase T |
| ? | NC_000913 | 1187066 = | NA (NA) | coding (1223/1227 nt) | pepT | peptidase T | |||||
TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1187139‑1187036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGC > NC_000913/1187066‑1187164 TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATA > 1:1313128/1‑100TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATA > 2:1631699/1‑100TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATA > 1:906219/1‑100 ATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATAC > 1:757120/1‑100 TTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACG > 2:3927390/1‑100 TGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGG < 2:1498548/100‑1 GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA < 2:3592031/100‑1 GGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGG > 1:1072487/1‑99 TTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACC > 1:1642745/1‑100 CTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGA > 1:1088797/1‑100 CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGGTGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA > 2:956883/1‑100 CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA > 2:3699332/1‑100 CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA > 2:3846960/1‑100 CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA > 1:1526403/1‑100 CTTCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAA > 2:476126/1‑100 TCCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC > 2:825970/1‑100 CCGTTGCGCCGTTAACTCGGCAATACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCA > 1:3738839/1‑100 ACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGC < 1:2769043/100‑1 GGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGA > 2:4075826/1‑100 GAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG > 2:1811836/1‑100 GAAGTAAGCGAAAAGGGATGAGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAG > 1:2606352/1‑100 AAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGC < 1:1582057/100‑1 TATTGGTTCTTCGAAGGGTAAGTTTGGATTTAAGCCGGATGCGGCATCACATGCCGCATCCCTTTTCGCTTACTTCCGTTGCGCCGTTAACTCGGCAATACGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1187139‑1187036‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGC > NC_000913/1187066‑1187164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |