BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1187036 =	NA (NA)	9 (0.060)	5/168	NT	NA	coding (1193/1227 nt)	pepT	peptidase T
*	?	NC_000913	1187066 =	NA (NA)	9 (0.060)	5/168	NT	NA	coding (1223/1227 nt)	pepT	peptidase T

Only 100 of 222 total aligned reads displayed.

GATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC  >  NC_000913/1186937‑1187135

gATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGt                                                                                                     >  2:1935222/1‑100 (MQ=255)

gATTACCCTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGCCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGt                                                                                                     <  1:2287214/100‑1 (MQ=255)

 ctcgcggcgctggtcaatagcgggtattggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTc                                                                                                    >  2:1811836‑M1/99‑100 (MQ=255)

  ttACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTcc                                                                                                   <  2:3754514/100‑1 (MQ=255)

  ttACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTcc                                                                                                   <  2:2607963/100‑1 (MQ=255)

    gcggcgctggtcaatagcgggtattggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGt                                                                                                 <  1:2769043‑M1/5‑1 (MQ=255)

    aCCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGt                                                                                                 >  2:1296333/1‑100 (MQ=255)

     ccGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTa                                                                                                >  1:1001377/1‑100 (MQ=255)

     ccGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTa                                                                                                >  2:2240417/1‑100 (MQ=255)

      cGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTAt                                                                                               >  2:2213666/1‑100 (MQ=255)

      cGTGCCCGAACCTATTCACTGGCGGATACAACTATCATGGTAAGCATCAGTATCTGCCTCAGGAAGGTATGGAAAAAGCGGTGCAGGCGAGCGTCCGTAt                                                                                               >  2:4256447/1‑100 (MQ=255)

        tGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTAtt                                                                                              <  1:2480092/99‑1 (MQ=255)

         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTg                                                                                             <  1:1560767/99‑1 (MQ=255)

         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGc                                                                                            >  1:2908516/1‑100 (MQ=255)

         gCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGc                                                                                            <  2:1988509/100‑1 (MQ=255)

          cccGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGcc                                                                                           <  1:3868276/100‑1 (MQ=255)

            cGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGa                                                                                         >  2:2719647/1‑100 (MQ=255)

            cGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGa                                                                                         >  2:3114263/1‑100 (MQ=255)

             gAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACGCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAg                                                                                        <  2:3932076/100‑1 (MQ=255)

              aaCCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGt                                                                                       <  1:2377397/100‑1 (MQ=255)

              aaCCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGt                                                                                       <  2:3051309/100‑1 (MQ=255)

                ccTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTa                                                                                     >  2:3595617/1‑100 (MQ=255)

                  tGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAAc                                                                                   >  2:907321/1‑100 (MQ=255)

                   gTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACg                                                                                  >  2:1964888/1‑100 (MQ=255)

                   gTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACg                                                                                  >  2:1662232/1‑100 (MQ=255)

                    ttCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACgg                                                                                 >  1:3665903/1‑100 (MQ=255)

                    atctcTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACgg                                                                                 <  2:2789782/96‑1 (MQ=255)

                     tCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgc                                                                                >  2:2648033/1‑100 (MQ=255)

                     tCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgc                                                                                <  2:1570009/100‑1 (MQ=255)

                      cACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgcg                                                                               >  2:2475457/1‑100 (MQ=255)

                      cACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgcg                                                                               >  2:2167962/1‑100 (MQ=255)

                      cACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGgcg                                                                               >  1:3966884/1‑100 (MQ=255)

                        cTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCa                                                                             >  1:1153035/1‑100 (MQ=255)

                        cTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCa                                                                             >  2:2048735/1‑100 (MQ=255)

                          ggCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAAc                                                                           >  2:2005826/1‑100 (MQ=255)

                            tggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACgg                                                                         >  1:3738839‑M1/72‑100 (MQ=255)

                             ggttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        >  2:825970‑M1/71‑100 (MQ=255)

                             ggTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        <  2:532773/100‑1 (MQ=255)

                             ggTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGa                                                                        <  2:1827208/100‑1 (MQ=255)

                               ttACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                      >  2:1195664/1‑100 (MQ=255)

                               ttACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                      <  2:4037049/100‑1 (MQ=255)

                               ttACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                      <  1:1205427/100‑1 (MQ=255)

                                  cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                   >  1:2330793/1‑100 (MQ=255)

                                    aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                 >  2:2367007/1‑100 (MQ=255)

                                    aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                 <  1:2825208/100‑1 (MQ=255)

                                     cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                >  2:1722233/1‑100 (MQ=255)

                                      tATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                               <  1:855946/100‑1 (MQ=255)

                                       aTCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaa                                                              >  2:3274381/1‑100 (MQ=255)

                                        tCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaa                                                             >  1:2115732/1‑100 (MQ=255)

                                         ggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaaa                                                            >  1:1642745‑M1/59‑100 (MQ=255)

                                         cATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                               >  1:2617846/1‑97 (MQ=255)

                                           tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                          <  2:3525497/100‑1 (MQ=255)

                                           tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGGCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                          <  1:3014204/100‑1 (MQ=255)

                                            ggTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAggg                                                         <  1:1610490/100‑1 (MQ=255)

                                             gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                        >  2:1627058/1‑100 (MQ=255)

                                             gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                        <  1:2139190/100‑1 (MQ=255)

                                              tAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGAt                                                       <  1:1464081/100‑1 (MQ=255)

                                                       gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGGCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                              <  2:3989187/100‑1 (MQ=255)

                                                          tgtgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGAt                                           >  1:1380816/1‑100 (MQ=255)

                                                           gtgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATg                                          <  1:1935218/100‑1 (MQ=255)

                                                            tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                         >  2:412642/1‑100 (MQ=255)

                                                             gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                        >  1:3062342/1‑100 (MQ=255)

                                                             gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                        >  1:3468903/1‑100 (MQ=255)

                                                             gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                        >  2:453845/1‑100 (MQ=255)

                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                       <  2:1870692/100‑1 (MQ=255)

                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                       >  2:904885/1‑100 (MQ=255)

                                                              aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                       <  2:1154066/100‑1 (MQ=255)

                                                               ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                        >  1:667799/1‑98 (MQ=255)

                                                               ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGc                                      <  1:2583240/100‑1 (MQ=255)

                                                                tctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCa                                     >  2:1778021/1‑100 (MQ=255)

                                                                tctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCa                                     >  1:3245826/1‑100 (MQ=255)

                                                                 ctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCAt                                    >  2:791430/1‑100 (MQ=255)

                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                   <  2:1040641/100‑1 (MQ=255)

                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                   <  1:4036942/100‑1 (MQ=255)

                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                   <  2:3887367/100‑1 (MQ=255)

                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                   <  2:3245838/100‑1 (MQ=255)

                                                                  tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                   <  2:371206/100‑1 (MQ=255)

                                                                   ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                  <  2:599140/100‑1 (MQ=255)

                                                                   ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                  >  2:1233632/1‑100 (MQ=255)

                                                                   ggAAGGTATGGAAAAAGCGGTGCAGGTGAGCGTCAGTATTGCCGAGTTAACGGCGCAACGTAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCTCAtt                                   <  1:1324294/99‑2 (MQ=255)

                                                                    gAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc                                  <  2:3174642/99‑1 (MQ=255)

                                                                      aGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGc                               <  2:1388560/100‑1 (MQ=255)

                                                                        gTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCtt                             >  2:2949652/1‑100 (MQ=255)

                                                                         tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                            <  2:135402/100‑1 (MQ=255)

                                                                         tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                            <  2:3700402/100‑1 (MQ=255)

                                                                         tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                            >  2:184794/1‑100 (MQ=255)

                                                                          aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                           >  2:3697793/1‑100 (MQ=255)

                                                                          aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                           <  1:4167770/100‑1 (MQ=255)

                                                                          aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                           >  2:2685157/1‑100 (MQ=255)

                                                                             gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                        >  1:3341187/1‑100 (MQ=255)

                                                                             gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                        <  1:3146587/100‑1 (MQ=255)

                                                                               aaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCa                      >  1:1105881/1‑100 (MQ=255)

                                                                                   gCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACt                  <  2:3074034/100‑1 (MQ=255)

                                                                                      gTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAc               <  1:519425/100‑1 (MQ=255)

                                                                                       tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc              <  1:3577197/100‑1 (MQ=255)

                                                                                       tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc              >  1:942517/1‑100 (MQ=255)

                                                                                             tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga        <  1:71635/100‑1 (MQ=255)

                                                                                              gATCGTCCGTATTGCCGAGTTAACGGCTCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga        >  1:3439218/1‑99 (MQ=255)

                                                                                                 cGTCCGTATTGCCGAGTTAACGGCGAAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCAGCATCCGGCTTAAATCCAAACTTACCCTTCgaagaa    >  1:1028740/1‑100 (MQ=255)

                                                                                                  gTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAc   <  1:3697452/100‑1 (MQ=255)

GATTACCGTGCCCGAACCTGTTCACTGGCGGTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACC  >  NC_000913/1186937‑1187135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.