New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1187036 =NA (NA)9 (0.060) 5/168 NT NA coding (1193/1227 nt) pepT peptidase T
?NC_000913 1187066 = NA (NA)coding (1223/1227 nt) pepT peptidase T

Only 100 of 214 total aligned reads displayed.

GTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGC  >  NC_000913/1186967‑1187164
                                                                                                   |                                                                                                  
gTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGaa                                                                                                    >  2:1633444/1‑100 (MQ=255)
 ttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                                                   >  2:476126‑M1/69‑100 (MQ=255)
 ttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcatcccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                                                   >  2:3846960‑M1/69‑100 (MQ=255)
 ttcttcgaagggtaagtttggatttaagccggatgcggcatcacatgccgcaccccttttcgcttactTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                                                   >  2:956883‑M1/69‑100 (MQ=255)
 ttACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAg                                                                                                   >  2:1195664/1‑100 (MQ=255)
    cAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTaa                                                                                                >  1:2330793/1‑100 (MQ=255)
      tcttccgctctAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                              <  1:2294874/90‑1 (MQ=255)
      aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                              <  2:1966722/100‑1 (MQ=255)
      aCTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGc                                                                                              >  2:2367007/1‑100 (MQ=255)
       ntATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                             >  2:2054172/2‑100 (MQ=255)
       cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                             >  2:1722233/1‑100 (MQ=255)
       cTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCg                                                                                             <  1:4227175/100‑1 (MQ=255)
         aTCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaa                                                                                           >  2:3274381/1‑100 (MQ=255)
          tCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaa                                                                                          >  1:2115732/1‑100 (MQ=255)
           cATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGaaaa                                                                                         >  1:1943995/1‑100 (MQ=255)
           cATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGa                                                                                            >  1:2617846/1‑97 (MQ=255)
             tGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGGCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAgg                                                                                       <  1:3014204/100‑1 (MQ=255)
              ggTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAggg                                                                                      <  1:1610490/100‑1 (MQ=255)
               gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                                                     <  1:2139190/100‑1 (MQ=255)
               gTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGa                                                                                     >  2:1627058/1‑100 (MQ=255)
                     aTGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGc                                                                               <  2:1943999/100‑1 (MQ=255)
                       gAGTTTGTGACTCGGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCTGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCa                                                                              <  1:1632951/99‑1 (MQ=255)
                        aGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtg                                                                            <  2:687282/100‑1 (MQ=255)
                         gTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCAtgt                                                                           <  1:377531/100‑1 (MQ=255)
                            tgtgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGAt                                                                        >  1:1380816/1‑100 (MQ=255)
                              tgACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                                                      >  2:412832/1‑100 (MQ=255)
                               naCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGc                                                                      >  1:3680393/2‑99 (MQ=255)
                               gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                                                     <  2:2471113/100‑1 (MQ=255)
                               gACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGcc                                                                     <  2:2966595/100‑1 (MQ=255)
                                aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                                                    >  2:904885/1‑100 (MQ=255)
                                aCTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCg                                                                    <  2:1870692/100‑1 (MQ=255)
                                 ctctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGc                                                                   >  1:717223/1‑100 (MQ=255)
                                  tctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCa                                                                  >  2:1778021/1‑100 (MQ=255)
                                  tctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCa                                                                  >  1:3245826/1‑100 (MQ=255)
                                   ctGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCAt                                                                 >  2:791430/1‑100 (MQ=255)
                                   ctGGAAGGTATGG‑AAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                                                >  2:3075082/1‑100 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATc                                                                <  2:1040641/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                <  1:690698/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                <  1:2199703/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                <  2:3887367/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                <  2:371206/100‑1 (MQ=255)
                                    tGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATc                                                                <  2:3245838/100‑1 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                                               <  2:599140/100‑1 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATcc                                                               >  2:1233632/1‑100 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGTGCAGGTGAGCGTCAGTATTGCCGAGTTAACGGCGCAACGTAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCTCAtt                                                                <  1:1324294/99‑2 (MQ=255)
                                     ggAAGGTATGGAAAAAGCGGCGCAGGTAATCGTCCGTATTGCCGAGTTCACGGCGTAAAAAAAAAAAAAAAAAAGGGATGCGGCATCACATGCCGCATcc                                                               <  1:3089749/100‑1 (MQ=255)
                                      gAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATcc                                                               <  2:3174642/99‑1 (MQ=255)
                                        aGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGc                                                            <  2:4026046/100‑1 (MQ=255)
                                        aGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGc                                                            <  2:1388560/100‑1 (MQ=255)
                                        aGGTATGGAAAAAGCGGTGCAGGTGATCGTACGTAGTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATCACATGCCGCATccctt                                                            <  1:2894964/100‑4 (MQ=38)
                                           tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                         >  2:184794/1‑100 (MQ=255)
                                           tATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                         <  2:135402/100‑1 (MQ=255)
                                            aaggAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGAGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTa                                                         <  1:3461174/97‑1 (MQ=255)
                                            aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                                                        <  1:4167770/100‑1 (MQ=255)
                                            aTGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaa                                                        >  2:3697793/1‑100 (MQ=255)
                                             tGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTaaa                                                       >  1:778333/1‑100 (MQ=255)
                                             tGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGACATGTGATGCCGCATCCGGCTTaaa                                                       >  1:3702067/1‑100 (MQ=255)
                                               gAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATc                                                     >  1:3341187/1‑100 (MQ=255)
                                                aaaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATcc                                                    >  2:1227259/1‑100 (MQ=255)
                                                 aaaaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCa                                                   >  1:1106068/1‑100 (MQ=255)
                                                   aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                                                 >  2:1821127/1‑100 (MQ=255)
                                                   aaGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCaaa                                                 >  2:2769054/1‑100 (MQ=255)
                                                        gTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAc                                            <  1:519425/100‑1 (MQ=255)
                                                         ttttcgcttacttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc                                           >  1:1642745‑M2/43‑100 (MQ=255)
                                                         tGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAcc                                           <  1:3577197/100‑1 (MQ=255)
                                                         tGCAGGTGATCGTCCGTATTGCAGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGCCATGTGATACCGCATCCGGCTTAAATCCAAACTTAcc                                           >  1:951441/1‑100 (MQ=255)
                                                          gCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTAccc                                          <  2:444296/100‑1 (MQ=255)
                                                             ggTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTc                                       >  2:2596994/1‑100 (MQ=255)
                                                               tGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                     <  2:3073417/100‑1 (MQ=255)
                                                               cttacttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                     >  1:1088797‑M2/37‑100 (MQ=255)
                                                                gATCGTCCGTATTGCCGAGTTAACGGCGCAAGGGAAGTAAGCGAGAAGGGATGCGGCATGTGATGACGCATTTGGCTTAAATCCAAACTTccct                                          <  1:3436865/94‑2 (MQ=255)
                                                                 aTCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCga                                     <  1:2590406/98‑1 (MQ=255)
                                                                   cttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaagaa                                 >  2:3699332‑M2/33‑100 (MQ=255)
                                                                   cttccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCgaagaa                                 >  1:1526403‑M2/33‑100 (MQ=255)
                                                                    gTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAc                                <  1:1023983/100‑1 (MQ=255)
                                                                     tccgttgcgccgttaactcggcaatacggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                               >  2:825970‑M2/31‑100 (MQ=255)
                                                                      CCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAAcc                               >  1:1072487‑M1/1‑99 (MQ=255)
                                                                      CCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCa                              <  2:1498548‑M1/100‑1 (MQ=255)
                                                                       CGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCaa                             >  2:3927390‑M1/1‑100 (MQ=255)
                                                                         TATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATa                           >  1:906219‑M1/1‑100 (MQ=255)
                                                                            tGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATAccc                        >  2:513200/1‑100 (MQ=255)
                                                                             gCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCg                       >  1:623294/1‑100 (MQ=255)
                                                                              ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc                      <  2:1137900/100‑1 (MQ=255)
                                                                              ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc                      <  1:1195661/100‑1 (MQ=255)
                                                                              ccGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGc                      >  2:2200332/1‑100 (MQ=255)
                                                                               cGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCt                     >  2:3771706/1‑100 (MQ=255)
                                                                               cGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCt                     >  2:2630107/1‑100 (MQ=255)
                                                                                gAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTa                    >  1:3519711/1‑100 (MQ=255)
                                                                                   ttAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTg                 <  2:3123017/100‑1 (MQ=255)
                                                                                    tAACGGCGCAACGGAAGTAAGCGAAAAGGGACGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATGCCCGCTATTGa                <  2:907229/100‑1 (MQ=255)
                                                                                    naaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGa                >  1:2449087/2‑100 (MQ=255)
                                                                                     aaCGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGACGAACCAATACCCGCTATTGAc               >  1:3186973/1‑100 (MQ=255)
                                                                                       cggcgacccGGACGTAAGCGAAAAGGGATGCGGCATGTGCTGCCGCATCCCGCTTAAATCCAAACTTCCCCTTCGAATAGCCAACACCCGCTATTGAcc              <  1:3043696/91‑1 (MQ=255)
                                                                                       cGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCa             >  2:2735570/1‑100 (MQ=255)
                                                                                          cgcAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAgcg          >  2:4096031/1‑100 (MQ=255)
                                                                                            cAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCGAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgcc        >  1:124998/1‑100 (MQ=255)
                                                                                            cAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgcc        >  2:267398/1‑100 (MQ=255)
                                                                                             aaCGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgccg       >  2:1505566/1‑100 (MQ=255)
                                                                                              acggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGcgccgc      <  1:2769043‑M2/95‑1 (MQ=255)
                                                                                                ggaAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGa    >  2:4075826‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                  
GTTACAACTATCATGGTAAGCATGAGTTTGTGACTCTGGAAGGTATGGAAAAAGCGGTGCAGGTGATCGTCCGTATTGCCGAGTTAACGGCGCAACGGAAGTAAGCGAAAAGGGATGCGGCATGTGATGCCGCATCCGGCTTAAATCCAAACTTACCCTTCGAAGAACCAATACCCGCTATTGACCAGCGCCGCGAGC  >  NC_000913/1186967‑1187164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.