New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1190580 =NA (NA)7 (0.050) 5/166 NT NA noncoding (1/23 nt) REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 1190603 = NA (NA)intergenic (‑156/+13) phoP/purB response regulator in two‑component regulatory system with PhoQ/adenylosuccinate lyase

Only 100 of 176 total aligned reads displayed.

GGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTGG  >  NC_000913/1190504‑1190702
                                                                                                   |                                                                                                   
 gggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc                                                                                                    <  2:681754/100‑1 (MQ=255)
  ggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACt                                                                                                   <  2:4129004/100‑1 (MQ=255)
  ggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACt                                                                                                   >  1:3159330/1‑100 (MQ=255)
  agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt                                                                                                   >  1:1031181‑M1/75‑100 (MQ=255)
    tAAACATAAAATAAACCATCGGGGAGGGTAGTTAAAGTGAAAAAATAAAAAGCTGATAATCTTAATAAGCAGGCCTGACAGCATCGCCATCCGGCACTGa                                                                                                 <  1:942850/100‑1 (MQ=255)
      aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa                                                                                               <  2:1023417/100‑1 (MQ=255)
       aCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATAc                                                                                              <  2:3800484/100‑1 (MQ=255)
        cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg                                                                                             >  2:2822027/1‑100 (MQ=255)
        cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg                                                                                             >  1:1481692/1‑100 (MQ=255)
         aTTAAATAAACCAGCGGGGAGGGGAGGAAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGa                                                                                            <  2:2546157/100‑1 (MQ=255)
          ttAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAg                                                                                           >  1:2461191/1‑100 (MQ=255)
          ttAAATAAACCACCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAg                                                                                           <  1:3283790/100‑1 (MQ=255)
           taaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg                                                                                          <  2:977340/100‑1 (MQ=255)
           taaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg                                                                                          >  1:1218981/1‑100 (MQ=255)
              ataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGttt                                                                                       >  1:1420996/1‑100 (MQ=255)
              ataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGttt                                                                                       <  1:28168/100‑1 (MQ=255)
               taaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTa                                                                                      >  1:2190161/1‑100 (MQ=255)
                aaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAt                                                                                     >  1:3616221/1‑100 (MQ=255)
                 aaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAtt                                                                                    >  1:2263576/1‑100 (MQ=255)
                  aCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAttt                                                                                   >  1:392216/1‑100 (MQ=255)
                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                                  <  2:392218/100‑1 (MQ=255)
                   ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc                                                                                  >  2:3989491/1‑100 (MQ=255)
                     aGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAg                                                                                <  1:271109/100‑1 (MQ=255)
                      gCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                                               <  2:488735/100‑1 (MQ=255)
                      atattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                                               >  1:1401601‑M1/55‑100 (MQ=255)
                       cGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCt                                                                              >  2:2871643/1‑100 (MQ=255)
                         gggaggggagGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc                                                                               <  1:609742/97‑1 (MQ=255)
                            aggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtcatca                                                                         <  2:760186/100‑1 (MQ=255)
                             ggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCaa                                                                        >  2:3346561/1‑100 (MQ=255)
                              gggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCt                                                                              <  1:1105302/93‑1 (MQ=255)
                                gaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCa                                                                     >  1:68632/1‑100 (MQ=255)
                                 aggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCAt                                                                    <  2:2780861/100‑1 (MQ=255)
                                  ggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATc                                                                   >  2:2426637/1‑100 (MQ=255)
                                    tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGt                                                                 >  2:3943807/1‑100 (MQ=255)
                                     aaaGTGAAAAAATAAAAAGCGGATAATCTTACTAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                                                <  1:3269409/100‑1 (MQ=255)
                                     aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg                                                                <  1:3034682/100‑1 (MQ=255)
                                        gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa                                                             <  1:3319751/100‑1 (MQ=255)
                                        gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa                                                             <  2:4092515/100‑1 (MQ=255)
                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                                           >  2:676262/1‑100 (MQ=255)
                                          gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATAGCCATCCGGCACTGATACGAGGTTTATTTCAGGTCATCAGCCATCGTg                                                                >  1:3478831/1‑95 (MQ=255)
                                           aaaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGc                                                           >  1:2112749/1‑99 (MQ=255)
                                              aaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGa                                                       <  2:1517605/100‑1 (MQ=255)
                                              aaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGa                                                       >  2:509214/1‑100 (MQ=255)
                                              aaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGa                                                       >  2:1162908/1‑100 (MQ=255)
                                                aTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc                                                     <  1:4035099/100‑1 (MQ=255)
                                                   aaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAat                                                  >  2:2975822/1‑100 (MQ=255)
                                                     gctgaaataaacctcgtatcagtgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAatat                                                >  1:256047‑M2/47‑100 (MQ=255)
                                                     aaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAatat                                                >  2:1176970/1‑100 (MQ=255)
                                                     aaGCGAATACTCTGAATATGCGGGCCGGACAGCATCGCCATTCGGTAATGATACGAGGTTTATTTCAGCTCATCAACCCTCGTGATAGCTCGACCActa                                                 <  1:4210721/99‑1 (MQ=255)
                                                      aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata                                               >  2:4149109/1‑100 (MQ=255)
                                                       gCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAg                                              <  2:832089/100‑1 (MQ=255)
                                                         ggATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGtt                                            <  2:3616235/100‑1 (MQ=255)
                                                         ggATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGtt                                            <  1:2822016/100‑1 (MQ=255)
                                                         ggATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGtt                                            <  2:2019023/100‑1 (MQ=255)
                                                          gATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTa                                           >  1:633894/1‑100 (MQ=255)
                                                           aTAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAg                                          <  1:3413583/100‑1 (MQ=255)
                                                              aTCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCg                                       >  2:4026875/1‑100 (MQ=255)
                                                              aTCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCg                                       >  2:947049/1‑100 (MQ=255)
                                                                 ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                                    >  1:1159076/1‑100 (MQ=255)
                                                                 ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                                    <  2:3429766/100‑1 (MQ=255)
                                                                 ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg                                    <  1:3076102/100‑1 (MQ=255)
                                                                    ataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCa                                 >  2:822575/1‑100 (MQ=255)
                                                                     taaGCAGGCCGGACATCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCa                                 <  1:2068916/99‑1 (MQ=255)
                                                                     taaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCAt                                >  1:1001961/1‑100 (MQ=255)
                                                                     taaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCAt                                >  1:3705018/1‑100 (MQ=255)
                                                                     taaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCAt                                >  1:1461757/1‑100 (MQ=255)
                                                                      aaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATc                               <  2:582892/100‑1 (MQ=255)
                                                                      aaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATc                               <  2:3378379/100‑1 (MQ=255)
                                                                        gCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGc                             <  2:1791902/100‑1 (MQ=255)
                                                                        cagtgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGc                             >  1:1209268‑M2/28‑100 (MQ=255)
                                                                           tgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt                          >  2:3253165‑M2/25‑100 (MQ=255)
                                                                           ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCtt                           >  1:526198/1‑99 (MQ=255)
                                                                            gccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc                         >  2:2327867‑M2/24‑100 (MQ=255)
                                                                            gccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc                         >  2:1316750‑M2/24‑100 (MQ=255)
                                                                            GCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc                         >  1:2903253‑M1/1‑100 (MQ=255)
                                                                             CCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa                        >  2:892808‑M1/1‑100 (MQ=255)
                                                                               GGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAgg                      >  2:3159342‑M1/1‑100 (MQ=255)
                                                                                GACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGc                     <  1:782884‑M1/100‑1 (MQ=255)
                                                                                 ACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCg                    <  2:207410‑M1/100‑1 (MQ=255)
                                                                                   aGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCggg                  <  1:286972/100‑1 (MQ=255)
                                                                                    gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGc                 >  1:1550006/1‑100 (MQ=255)
                                                                                    gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGc                 >  2:3825512/1‑100 (MQ=255)
                                                                                     cATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCt                >  2:1931719/1‑100 (MQ=255)
                                                                                        cGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtc             <  1:2434314/100‑1 (MQ=255)
                                                                                        cGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtc             >  1:3089000/1‑100 (MQ=255)
                                                                                         gCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtct            >  1:3226014/1‑100 (MQ=255)
                                                                                          ccATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtctc           <  2:2141444/100‑1 (MQ=255)
                                                                                          ccATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtctc           >  2:3222831/1‑100 (MQ=255)
                                                                                           cATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctct          <  2:1189943/100‑1 (MQ=255)
                                                                                           cATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctct          <  1:471911/100‑1 (MQ=255)
                                                                                           cATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctct          <  1:1908479/100‑1 (MQ=255)
                                                                                              ccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttct       >  1:347096‑M2/6‑100 (MQ=255)
                                                                                               cggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttctt      >  1:510643‑M2/5‑100 (MQ=255)
                                                                                               cggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttctt      >  2:2257517‑M2/5‑100 (MQ=255)
                                                                                                ggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttcttc     <  2:1504794‑M2/97‑1 (MQ=255)
                                                                                                 gcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTTATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttcttct    <  2:3567046‑M2/98‑1 (MQ=255)
                                                                                                  cACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTg   >  2:2328810‑M2/2‑100 (MQ=255)
                                                                                                  cACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTg   >  2:3634203‑M2/2‑100 (MQ=255)
                                                                                                  cACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTg   <  2:1461761‑M2/99‑1 (MQ=255)
                                                                                                   aCTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTgg  <  2:3912301/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTGG  >  NC_000913/1190504‑1190702

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.