| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3632752 = | 103 (0.700) | 18 (0.140) | 7/154 | NT | 15.5% | intergenic (‑162/+100) | yhiJ/yhiL | DUF4049 family protein/pseudogene, DUF4049 family protein |
| ? | NC_000913 | 3632789 = | 108 (0.850) | intergenic (‑199/+63) | yhiJ/yhiL | DUF4049 family protein/pseudogene, DUF4049 family protein | |||||
AACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3632862‑3632752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAAT > NC_000913/3632789‑3632886 AACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACG > 1:3492799/1‑100AACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACG < 1:943653/100‑1 ACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGC > 1:3655225/1‑100 ACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGC > 1:3694318/1‑100 CTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCC < 2:4002000/100‑1 CTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCC > 2:706457/1‑100 CTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCC > 2:1134293/1‑100 TACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAATATTTCATAGGTTTTCTTAATAAATTGTAGAGACATGTTCTGATGACGCat > 1:996408/1‑98 ACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTC < 2:906606/100‑1 ACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTC < 1:3014363/100‑1 cgTTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 1:3826018/3‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 1:1899425/1‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 1:1162452/1‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 2:4009490/1‑100 CATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTAAAAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCT > 2:3691299/1‑100 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA < 2:2266207/100‑1 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA < 2:949756/100‑1 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA < 1:2378725/100‑1 ATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTA < 1:1173767/100‑1 TTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTAC < 1:3133881/100‑1 TTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTAC > 1:156953/1‑100 TTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTAC < 2:712398/100‑1 TAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACA > 2:1873918/1‑100 AAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAAT > 2:1233468/1‑100 AAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGCTTTCTTAATCGATTGTAGAGGCGTGTTCTGATGACGCCTCTACAAT > 2:888112/1‑100 AACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC > 2:1506538/1‑100 CGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATATATTGTAGAGTCATGTTCTGATGACGTCTCTACAATCGATTAAGAAAACC > 2:2447376/1‑100 TAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTATAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATG > 2:2218677/1‑100 CGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGT > 1:3060081/1‑100 CGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGT > 1:1319233/1‑100 GATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT > 1:277206/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 2:3134326/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 1:1087722/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 1:1214285/1‑100 ATTGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGA > 2:2822218/1‑96 ATTGTAGAGGCATGCTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTT > 2:1033420/1‑100 ATTGTAATGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTat > 2:1569378/1‑98 TGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTA > 1:2624004/1‑100 TGTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTA > 2:1530006/1‑100 TGTAGAGGCATGTTCTGATGACGCCTCTACAATAGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACAGACCACCGTATTCATGGAGTTTT > 2:1591248/1‑99 tTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGAGTAAAAAGACATACCACCGTATTCATGGAGTTTTAA > 2:2436683/2‑100 GTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAA > 1:4024186/1‑100 GTAGAGGCATGTTCTGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAA > 1:3812536/1‑100 GTAGAGGCATGTTCCGATGACGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAA > 2:3972889/1‑100 CTCTACATTCAATTAAGAAAACCTATGAAATACTGGTAGTATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 2:2150884/100‑1 CTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 1:1440282/100‑1 CTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 2:2963044/100‑1 CTAGAATCTAGTATGAAAGCGTATGAAATACTTGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCC < 1:3866261/98‑1 CTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTG > 1:3663990/1‑100 CTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTG < 2:2140747/100‑1 CTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTG < 1:2047349/100‑1 CTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTATTAATGTAGTTGAAAACAACTAAGCCCTG > 2:837493/1‑100 TACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGA > 2:1060617/1‑100 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAG > 1:3313507/1‑100 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAG < 1:3076956/100‑1 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAG > 1:2875520/1‑100 ACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGA < 2:189129/99‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGn < 1:3258545/100‑2 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 1:105654/100‑1 CAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGA < 2:3796518/98‑1 CAAGCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 1:906612/100‑1 AATCTATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 2:3897064/99‑1 AATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGA > 1:3238774/1‑100 AATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGA > 2:1296719/1‑100 AATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGG < 2:2651618/99‑1 TCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAAT < 1:1202542/100‑1 AACTACATTAAAACTCCATGAATACGGTGGTATGTCTTTTTAATCCTGCCAGTATTTCATAGGTTTTCTTAATCGATTGTAGAGGCATGTTCTGATGACGCCTCTACAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3632862‑3632752‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAAT > NC_000913/3632789‑3632886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |