New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3632752 =103 (0.700)18 (0.140) 7/154 NT 15.5% intergenic (‑162/+100) yhiJ/yhiL DUF4049 family protein/pseudogene, DUF4049 family protein
?NC_000913 3632789 = 108 (0.850)intergenic (‑199/+63) yhiJ/yhiL DUF4049 family protein/pseudogene, DUF4049 family protein

Only 100 of 226 total aligned reads displayed.

CTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT  >  NC_000913/3632654‑3632851
                                                                                                  |                                                                                                   
cTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGA                                                                                                    <  1:1545870‑M1/100‑1 (MQ=255)
 tCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGAT                                                                                                   >  2:797736‑M1/1‑100 (MQ=255)
  tcctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGAtt                                                                                                  >  1:3238774‑M1/97‑100 (MQ=255)
   cctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGCTTg                                                                                                 <  1:906612‑M1/5‑1 (MQ=255)
   cctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGAtt                                                                                                  <  2:2651618‑M1/4‑1 (MQ=255)
   cctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTg                                                                                                 <  1:105654‑M1/5‑1 (MQ=255)
    ctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGt                                                                                                >  1:3313507‑M1/95‑100 (MQ=255)
    ctcagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGt                                                                                                <  1:3076956‑M1/6‑1 (MQ=255)
     gTTCGGTGGGAAAATAATTATATTTTGCACAAATCCTTCAGCCTCAAAGCATAATATGAAATGTCTTAGCTCATAGCAGAGCAAGTCCCTAAAGATTct                                                                                                >  2:2786674‑M1/1‑97 (MQ=255)
      ttCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAG                                                                                              >  1:3860321‑M1/1‑100 (MQ=255)
      ttCGATGGGAAAATAATTATATTTTGCACAAATAATTCATCATAAAAGCATAATATGAAATTTCTTATCTCTTTGCAGAGAAAGTTCCTAAAGATTGTA                                                                                               <  2:1890311‑M1/99‑1 (MQ=255)
      cagggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTag                                                                                              <  2:2140747‑M1/8‑1 (MQ=255)
        gggcttagttgttttcaactacattaaaactccatgaatacggtggtatgtctttttaatactaccagtatttcataggttttcttaattGAATGTagag                                                                                            <  2:2150884‑M1/10‑1 (MQ=255)
        cGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAG                                                                                            >  2:3089412‑M1/1‑100 (MQ=255)
        cGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAG                                                                                            >  2:1920401‑M1/1‑100 (MQ=255)
        cGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAAAG                                                                                            >  2:2389868‑M1/1‑100 (MQ=255)
         gATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTGTTATCTGATAGCAGAGAAAGTCCCTAAAGATTGTAGAGG                                                                                           >  2:2899819‑M1/1‑100 (MQ=255)
          aTGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGC                                                                                          >  2:669442‑M1/1‑100 (MQ=255)
          aTGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGC                                                                                          <  1:338299‑M1/100‑1 (MQ=255)
           tGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCg                                                                                         <  1:2624695/100‑1 (MQ=255)
             ggAAAATAATTATATTTTGCACAATTCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTATAGtc                                                                                          >  2:3592312‑M1/1‑95 (MQ=255)
              gAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGtca                                                                                      >  2:2832276/1‑100 (MQ=255)
                  ataatTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAg                                                                                  <  2:1073660/100‑1 (MQ=255)
                  ataatTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAg                                                                                  >  1:646732/1‑100 (MQ=255)
                     atTATATTTTTGACAAATCATTCAGGCTCAAAGCAGAATATGAAATTTCTTAGCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAAc                                                                               <  2:1560469/100‑1 (MQ=255)
                        atatTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATg                                                                            <  2:1721871‑M2/100‑2 (MQ=255)
                         tatTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATTTCATAGCAGAGAAACTCCCTAAAGATTGTACAGACGACATCAGAACATgc                                                                           <  2:2234385‑M2/100‑3 (MQ=255)
                          atTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcc                                                                          <  2:414909‑M2/100‑4 (MQ=255)
                          atTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcc                                                                          >  1:122549‑M2/1‑97 (MQ=255)
                            tttGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctc                                                                        >  2:1515‑M2/1‑95 (MQ=255)
                             ttGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctct                                                                       <  2:2929204‑M1/100‑20 (MQ=255)
                             ttGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctct                                                                       >  2:1234266‑M2/1‑94 (MQ=255)
                              tGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctcta                                                                      >  1:1986408‑M2/1‑93 (MQ=255)
                              tGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctcta                                                                      >  1:56319‑M2/1‑93 (MQ=255)
                               ttaaaactccatgaatacggtggtatgtctttttactcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCtaa                                                                     >  2:2436683‑M1/68‑99 (MQ=255)
                               ttaaaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTAc                                                                     >  1:3812536‑M1/68‑100 (MQ=255)
                                cacaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctaca                                                                    <  1:3466310‑M1/100‑23 (MQ=255)
                                cacaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctaca                                                                    <  2:1499479‑M1/100‑23 (MQ=255)
                                cacaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctctaca                                                                    >  1:3039861‑M2/1‑91 (MQ=255)
                                 acaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctacaa                                                                   <  1:1145227‑M1/100‑24 (MQ=255)
                                 acaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctacaa                                                                   <  2:1382989‑M1/100‑24 (MQ=255)
                                 acaAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctctacaa                                                                   <  1:3255421‑M2/100‑11 (MQ=255)
                                 aaaactccatgaatacggtggtctgtctttttaatcctgccagtatttcataggttttcttaatcTATTGTAGAGGCGTCATCAGAACATGCCTCTACa                                                                    >  2:1591248‑M1/66‑99 (MQ=255)
                                  caAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGATGCGTCATCAGAACATgcctctacaat                                                                  <  2:298849‑M2/100‑12 (MQ=255)
                                  aaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAGCATGCCTCTACAAt                                                                  >  2:1033420‑M1/65‑100 (MQ=255)
                                  aaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAAt                                                                  >  2:3134326‑M1/65‑100 (MQ=255)
                                  aaactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAAt                                                                  >  1:1214285‑M1/65‑100 (MQ=255)
                                   aactccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATc                                                                 >  1:277206‑M1/64‑100 (MQ=255)
                                   aaaTCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctacaat                                                                  <  2:3292342‑M1/99‑25 (MQ=255)
                                   aaaTCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATgcctctacaatc                                                                 <  2:4039839‑M2/100‑13 (MQ=255)
                                    actccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCg                                                                >  1:1319233‑M1/63‑100 (MQ=255)
                                      tCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGAt                                                              <  1:663038/100‑1 (MQ=255)
                                       cATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGAtt                                                             <  2:3524268/100‑1 (MQ=255)
                                        catgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTATAGAGGCGTCATCAGAACATGCCTCTACAATCGATTa                                                            >  2:2218677‑M1/59‑100 (MQ=255)
                                        aTTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTa                                                            >  1:3977808/1‑100 (MQ=255)
                                         ttCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctacaatctttagg                                                           <  1:184210‑M1/100‑32 (MQ=255)
                                          tCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCatgttctgatgacgcctctacaatctttaggg                                                          <  1:3685229‑M1/100‑33 (MQ=255)
                                           cAGCCTCAAAGCATAATATGAAATTTCTTATCTCATCGCAGAGAAAGTCCCTAAAGATTGTAGAGGCATCATCAGAACATGCCTCTACAATCGATTAAGa                                                         >  2:2877082/1‑100 (MQ=255)
                                           cAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGa                                                         <  1:281103/100‑1 (MQ=255)
                                             gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGAGTCATCAGAACATGCCTCTACAAACGATTAAGaaa                                                       >  1:1693445/1‑100 (MQ=255)
                                              ccTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGaaaa                                                      >  1:3195220/1‑100 (MQ=255)
                                               cTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAc                                                     >  1:2965972/1‑100 (MQ=255)
                                               cTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAc                                                     <  1:4050901/100‑1 (MQ=255)
                                                tCAAAACATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAAGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAcc                                                    <  2:204170/100‑1 (MQ=255)
                                                 cAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCt                                                   >  2:3353322/1‑100 (MQ=255)
                                                 cAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCt                                                   >  2:3942135/1‑100 (MQ=255)
                                                   aaGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTAt                                                 <  2:3716585/100‑1 (MQ=255)
                                                      cATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaa                                              >  1:118839/1‑100 (MQ=255)
                                                      cATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaa                                              >  1:3018361/1‑100 (MQ=255)
                                                        taataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAAt                                            <  1:4032872/100‑1 (MQ=255)
                                                          atatGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATAc                                          <  2:586526/100‑1 (MQ=255)
                                                           tatGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACt                                         >  2:2588079/1‑100 (MQ=255)
                                                            atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                        >  2:3998749/1‑100 (MQ=255)
                                                            atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                        <  1:453439/100‑1 (MQ=255)
                                                               aaaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCa                                     <  2:440400/100‑1 (MQ=255)
                                                                 aTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAgg                                   <  1:2039140/100‑1 (MQ=255)
                                                                 aTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAgg                                   >  1:2740838/1‑100 (MQ=255)
                                                                    tCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGAtt                                <  2:2745035/100‑1 (MQ=255)
                                                                     cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                               >  1:2138139/1‑100 (MQ=255)
                                                                       tATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTaaa                             >  2:3052038/1‑100 (MQ=255)
                                                                        aTCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTaaaa                            >  1:3730565/1‑100 (MQ=255)
                                                                           tcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGa                         <  1:2470374/100‑1 (MQ=255)
                                                                            cATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGAc                        >  2:3194537/1‑100 (MQ=255)
                                                                            cATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGAc                        <  2:3497829/100‑1 (MQ=255)
                                                                              tAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCAACAGAACATGCATCTAAAATCGATTAAGCAAACATATGAAATACTAGCAGGATTaaaaaaaaa                       >  2:2025817/1‑95 (MQ=255)
                                                                               aGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATa                     <  1:2899835/100‑1 (MQ=255)
                                                                               aGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATa                     >  1:1885423/1‑100 (MQ=255)
                                                                                 cAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATacc                   <  1:2273649/100‑1 (MQ=255)
                                                                                 cAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATacc                   >  1:3363288/1‑100 (MQ=255)
                                                                                 cAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATacc                   <  1:2389882/100‑1 (MQ=255)
                                                                                  agagAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATacca                  >  2:2222917/1‑100 (MQ=255)
                                                                                     gaAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCg               <  2:3860296/100‑1 (MQ=255)
                                                                                            ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt        >  1:3270988/1‑100 (MQ=255)
                                                                                            ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt        >  1:1012789/1‑100 (MQ=255)
                                                                                             cTAAAGATTGTAGAGGCGTCATCAGAACATgcctctacaatctttagggactttctctgctatgagataagaaatttcatattatgctttgaggctgaat       <  1:70406‑M2/100‑71 (MQ=255)
                                                                                              tAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg       >  2:233478/1‑99 (MQ=255)
                                                                                                aaGATTGTAGAGGCGTCATCAGAACATgcctctacaatctttagggactttctctgctatgagataagaaatttcatattatgctttgaggctgaatgat    <  2:4009266‑M2/100‑74 (MQ=255)
                                                                                                aaGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGCAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAg    <  2:3918413/100‑1 (MQ=255)
                                                                                                  gATTGTAGAGGCGTCATCAGAACATgcctctacaatctttagggactttctctgctatgagataagaaatttcatattatgctttgaggctgaatgattt  <  1:2506181‑M2/100‑76 (MQ=255)
                                                                                                  gATTGTAGAGGCGTCATCAGAACATgcctctacaatctttagggactttctctgctatgagataagaaatttcatattatgctttgaggctgaatgattt  <  2:16483‑M2/100‑76 (MQ=255)
                                                                                                  |                                                                                                   
CTCATGTTCGATGGGAAAATAATTATATTTTGCACAAATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTT  >  NC_000913/3632654‑3632851

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.