BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3632752 =	103 (0.700)	18 (0.140)	7/154	NT	15.5%	intergenic (‑162/+100)	yhiJ/yhiL	DUF4049 family protein/pseudogene, DUF4049 family protein
*	?	NC_000913	3632789 =	108 (0.850)	18 (0.140)	7/154	NT	15.5%	intergenic (‑199/+63)	yhiJ/yhiL	DUF4049 family protein/pseudogene, DUF4049 family protein

Only 100 of 196 total aligned reads displayed.

AATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA  >  NC_000913/3632690‑3632887

actccatgaatacggtggtatgtctttttaatcctgccagtatttcataggttttcttaatcGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCg                                                                                                    >  1:3060081‑M1/63‑100 (MQ=255)

aaTCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCg                                                                                                    >  1:3831582/1‑100 (MQ=255)

  tCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGAt                                                                                                  <  1:663038/100‑1 (MQ=255)

   cATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGAtt                                                                                                 <  2:2232517/100‑1 (MQ=255)

    aTTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTTATCAGAACATGCTTCTACAATCGATTa                                                                                                >  2:3087058/1‑100 (MQ=255)

    aTTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTa                                                                                                >  1:3977808/1‑100 (MQ=255)

      tCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAg                                                                                              <  1:390462/100‑1 (MQ=255)

       cAGCCTCAAAGCATAATATGAAATTTCTTATCTCATCGCAGAGAAAGTCCCTAAAGATTGTAGAGGCATCATCAGAACATGCCTCTACAATCGATTAAGa                                                                                             >  2:2877082/1‑100 (MQ=255)

         gCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGAGTCATCAGAACATGCCTCTACAAACGATTAAGaaa                                                                                           >  1:1693445/1‑100 (MQ=255)

            tCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAcc                                                                                        >  1:2751532/1‑100 (MQ=255)

            tCAAAACATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAAGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAAcc                                                                                        <  2:204170/100‑1 (MQ=255)

             cAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCt                                                                                       >  2:3353322/1‑100 (MQ=255)

             cAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCt                                                                                       >  2:542705/1‑100 (MQ=255)

               aaGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTAt                                                                                     <  2:3572568/100‑1 (MQ=255)

               aaGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTAt                                                                                     <  2:3716585/100‑1 (MQ=255)

                  cATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaa                                                                                  >  1:118839/1‑100 (MQ=255)

                  cATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaa                                                                                  >  1:3018361/1‑100 (MQ=255)

                   ataataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGaaa                                                                                 >  2:3176662/1‑100 (MQ=255)

                    taataTGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAAt                                                                                <  1:1944861/100‑1 (MQ=255)

                       tatGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACt                                                                             >  2:2588079/1‑100 (MQ=255)

                        atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                                                            <  2:3199004/100‑1 (MQ=255)

                        atGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTg                                                                            <  2:3502152/100‑1 (MQ=255)

                         tGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTgg                                                                           <  2:2107324/100‑1 (MQ=255)

                           aaaTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCa                                                                         <  2:658056/100‑1 (MQ=255)

                             aTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAgg                                                                       >  1:2955054/1‑100 (MQ=255)

                             aTTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAgg                                                                       <  1:2039140/100‑1 (MQ=255)

                              tttCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGa                                                                      <  1:542710/100‑1 (MQ=255)

                                tCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGAtt                                                                    <  2:2745035/100‑1 (MQ=255)

                                 cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                                                                   >  2:2142827/1‑100 (MQ=255)

                                 cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                                                                   >  1:2138139/1‑100 (MQ=255)

                                 cTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTa                                                                   >  1:3367584/1‑100 (MQ=255)

                                   tATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATTAAATACTTGCAGGATTaaa                                                                 >  2:3130760/1‑100 (MQ=255)

                                   tATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTaaa                                                                 >  2:3655201/1‑100 (MQ=255)

                                      ctcCTAGCAGAGAAAGTCTCTAGAGATTGTAGAAGCGTCAACAGAAAATGCCTCAACAATCGAGGAAGAAAACCGATGAAATACTGGCAGGATTAAAAAg                                                              >  2:2188170/1‑100 (MQ=255)

                                       tcATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGa                                                             >  1:991559/1‑100 (MQ=255)

                                         aTAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACa                                                           >  1:2003850/1‑100 (MQ=255)

                                          tAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCAACAGAACATGCATCTAAAATCGATTAAGCAAACATATGAAATACTAGCAGGATTaaaaaaaaa                                                           >  2:2025817/1‑95 (MQ=255)

                                           aGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACAt                                                          <  2:3408054/99‑1 (MQ=255)

                                             cAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATacc                                                       <  1:2273649/100‑1 (MQ=255)

                                                 ggttttcttaatcGATTGTAGAGACGTCATCAGAACATGACTCTACAATATATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCg                                                   >  2:2447376‑M1/14‑100 (MQ=255)

                                                    aGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTAt                                                <  1:3138536/100‑1 (MQ=255)

                                                        ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt                                            >  1:3270988/1‑100 (MQ=255)

                                                        ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt                                            >  1:1012789/1‑100 (MQ=255)

                                                        ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt                                            <  2:3018342/100‑1 (MQ=255)

                                                        ccTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCGACAATCGCTTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCAt                                            >  2:417863/1‑100 (MQ=255)

                                                         taatcgattgtagaggcatgttctgatgacgcctctataatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                           >  2:2218677‑M2/43‑100 (MQ=255)

                                                         cTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                           <  1:4045763/100‑1 (MQ=255)

                                                         cTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                           <  1:2638075/100‑1 (MQ=255)

                                                          tAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATgg                                          >  1:3007543/1‑100 (MQ=255)

                                                          tAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATg                                           >  2:233478/1‑99 (MQ=255)

                                                           aaaGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGa                                         <  1:2464954/100‑1 (MQ=255)

                                                            aaGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAg                                        <  2:3918445/100‑1 (MQ=255)

                                                             cgattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGt                                       >  1:1319233‑M2/39‑100 (MQ=255)

                                                              gattgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGtt                                      >  1:277206‑M2/38‑100 (MQ=255)

                                                              GATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGtt                                      >  2:1506538‑M1/1‑100 (MQ=255)

                                                               attgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGa                                         >  2:2822218‑M2/37‑96 (MQ=255)

                                                               attgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGttt                                     >  1:1214285‑M2/37‑100 (MQ=255)

                                                               attgtagaggcatgctctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGttt                                     >  2:1033420‑M2/37‑100 (MQ=255)

                                                               attgtaatggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGagtat                                     >  2:1569378‑M2/37‑98 (MQ=255)

                                                               ATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGttt                                     >  2:1233468‑M1/1‑100 (MQ=255)

                                                                 tgtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTa                                   >  2:1530006‑M2/35‑100 (MQ=255)

                                                                 TGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTa                                   >  2:1873918‑M1/1‑100 (MQ=255)

                                                                  gtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                  >  1:3812536‑M2/34‑100 (MQ=255)

                                                                  gtagaggcatgttctgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                  >  1:4024186‑M2/34‑100 (MQ=255)

                                                                  gtagaggcatgttccgatgacgcctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                  >  2:3972889‑M2/34‑100 (MQ=255)

                                                                  GTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTaa                                  >  1:156953‑M1/1‑100 (MQ=255)

                                                                   TAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAAt                                 <  1:2378725‑M1/100‑1 (MQ=255)

                                                                    AGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATg                                >  1:1899425‑M1/1‑100 (MQ=255)

                                                                    AGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATg                                >  1:1162452‑M1/1‑100 (MQ=255)

                                                                     GAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGt                               <  2:906606‑M1/100‑1 (MQ=255)

                                                                       GGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAg                             <  2:4002000‑M1/100‑1 (MQ=255)

                                                                       GGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAg                             >  2:706457‑M1/1‑100 (MQ=255)

                                                                        GCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGt                            >  1:3694318‑M1/1‑100 (MQ=255)

                                                                         CGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGtt                           >  1:3492799‑M1/1‑100 (MQ=255)

                                                                          gTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTg                          <  2:1157722/100‑1 (MQ=255)

                                                                            catcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaa                        >  1:1289544/1‑100 (MQ=255)

                                                                            catcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaa                        >  1:2572884/1‑100 (MQ=255)

                                                                            catcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGGTTTAATGTAGTTGaa                        >  1:4078993/1‑100 (MQ=255)

                                                                              tcaGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGaaaa                      <  2:1393369/100‑1 (MQ=255)

                                                                               caGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaac                     <  1:3196224/100‑1 (MQ=255)

                                                                               caGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaac                     >  1:250571/1‑100 (MQ=255)

                                                                                aGAATATGACTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATAAAAAAGACATACCACAGTATTCATGTTGTTTTAAGGTAGTTGaaaaaa                    >  2:479581/1‑98 (MQ=255)

                                                                                aGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaaca                    <  2:1654745/100‑1 (MQ=255)

                                                                                aGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaaca                    <  2:1885410/100‑1 (MQ=255)

                                                                                  aaCATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAaacaac                  <  2:408688/100‑1 (MQ=255)

                                                                                    cATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTa                <  1:632450/100‑1 (MQ=255)

                                                                                      tGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGGTTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAg              >  1:3873124/1‑100 (MQ=255)

                                                                                         ctctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGccc           <  2:2963044‑M2/90‑1 (MQ=255)

                                                                                           ctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTg         >  1:3663990‑M2/9‑100 (MQ=255)

                                                                                           ctacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTATTAATGTAGTTGAAAACAACTAAGCCCTg         >  2:837493‑M2/9‑100 (MQ=255)

                                                                                            tacaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGa        >  2:1060617‑M2/8‑100 (MQ=255)

                                                                                             acaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAg       >  1:3313507‑M2/7‑100 (MQ=255)

                                                                                             acaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAg       <  1:3076956‑M2/94‑1 (MQ=255)

                                                                                             acaatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAg       >  1:2875520‑M2/7‑100 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGagn      <  1:3258545‑M2/95‑2 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGa        <  2:3796518‑M2/93‑1 (MQ=255)

                                                                                              caatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg      <  1:105654‑M2/95‑1 (MQ=255)

                                                                                              caagcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg      <  1:906612‑M2/95‑1 (MQ=255)

                                                                                               aatcTATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg      <  2:3897064‑M2/95‑1 (MQ=255)

                                                                                               aatcGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAgg      <  2:2651618‑M2/95‑1 (MQ=255)

AATCATTCAGCCTCAAAGCATAATATGAAATTTCTTATCTCATAGCAGAGAAAGTCCCTAAAGATTGTAGAGGCGTCATCAGAACATGCCTCTACAATCGATTAAGAAAACCTATGAAATACTGGCAGGATTAAAAAGACATACCACCGTATTCATGGAGTTTTAATGTAGTTGAAAACAACTAAGCCCTGAGGAATA  >  NC_000913/3632690‑3632887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.