| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2538535 = | NA (NA) | 13 (0.100) | 8/164 | NT | NA | noncoding (1/98 nt) | RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP174 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 3234693 | NA (NA) | noncoding (56/86 nt) | REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 176 total aligned reads displayed.
CTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAG > NC_000913/2538436‑2538634 | tttttgttttatggaagcgcgattccagaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagg < 1:2949311‑M1/1‑1 (MQ=255)cTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATg > 1:996990/1‑100 (MQ=255)cTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATg > 1:1616861/1‑100 (MQ=255)cTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATg > 2:3598647/1‑100 (MQ=255) tttgttttatggaagcgcgattccagaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGcc > 2:3213232‑M1/98‑100 (MQ=255) tttgttttatggaagcgcgattccagaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGc < 2:551270‑M1/2‑1 (MQ=255) cAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCg > 1:995914/1‑100 (MQ=255) cAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCg > 2:1079028/1‑100 (MQ=255) cAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCg > 1:906203/1‑100 (MQ=255) aaaaaaTGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCgg < 1:3353304/100‑1 (MQ=255) gttttatggaagcgcgattccagaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGCCGGa < 2:3916024‑M1/6‑1 (MQ=255) aaaaTGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGAt < 1:957182/100‑1 (MQ=255) aaaTGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATg > 2:3034181/1‑100 (MQ=255) aTGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:3137868/1‑100 (MQ=255) gattgatGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATgcggc < 1:257845/100‑1 (MQ=255) gattgatGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATgcggc > 2:362899/1‑100 (MQ=255) gatgaCCTTACGGCGTTTCCTCACGAAAATTAAATAATGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTaa < 1:158886/100‑1 (MQ=255) tgaCCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGTATGCGGCGTAAAc > 2:1032272/1‑100 (MQ=255) gaCCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:3931859/100‑1 (MQ=255) gaCCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACg < 1:2002933/100‑1 (MQ=255) aCCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGc > 1:3376696/1‑100 (MQ=255) ccTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGcc < 2:3458610/100‑1 (MQ=255) ccTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGcc < 1:4127629/100‑1 (MQ=255) ttccagaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGCCGGATGCGGCGTAAACGCCtt < 1:3391534‑M1/23‑1 (MQ=255) ttACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATAAGGCGtttacgccgc < 1:1855144/100‑10 (MQ=38) ttACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTACGCCGCATCCGGCATAAAcaaagc < 2:1580863/100‑6 (MQ=37) agaactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGCCGGATGCGGCGTAAACGCCTTATcc > 1:3248897‑M1/74‑100 (MQ=255) gggTTGCCTCACGAAAATTAAATACTGCATTTGTCTGCAGCAACAACTGTTAAAAAAGTGGGCTTTGTTTATGCCGGAGGCGGCGTAAACGcc < 2:4003421/91‑1 (MQ=37) cGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCg > 2:401956/1‑99 (MQ=255) cGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACACATTATCCgg > 2:3224515/1‑100 (MQ=255) aactgggcagacattgccggatgcgacgcttgccgcgtcttatccggcctggagtaacgtgctgaacgtagGCCGGATGCGGCGTAAACGCCTTATCCgg > 1:1100899‑M1/72‑100 (MQ=255) gTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGc < 1:3034200/100‑1 (MQ=255) tttGCTCACGAAAATTAAATCCTGCATTTGTCTGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGCATGCGGCGTAAACGCCTTATCCGGcc < 2:245223/100‑1 (MQ=25) ttCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGcc < 2:1680969/99‑1 (MQ=255) ttCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 2:134316/100‑1 (MQ=255) ttCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCt < 2:3268741/100‑1 (MQ=255) ttCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTTACGCCGCATCCGGcat < 1:4051905/100‑3 (MQ=25) cTCATGAAAATTAAATACTGCATTTGTCGGCAGCAATAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCTGCGTTTTTGCCTTATCCGGACTACa < 2:699705/100‑1 (MQ=25) cTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACa < 1:2141230/100‑1 (MQ=255) cTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACa > 1:2592859/1‑100 (MQ=255) cTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACa > 2:1620536/1‑100 (MQ=255) cTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACa > 2:1522291/1‑100 (MQ=255) tCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaa < 1:498633/100‑1 (MQ=255) cACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACaaa > 1:1420184/1‑100 (MQ=255) cGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTGTCCGGCCTACAAAAt > 1:702674/1‑100 (MQ=255) cGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAt < 2:2632577/100‑1 (MQ=255) cGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAt > 2:43320/1‑100 (MQ=255) aaaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt > 2:2915943/1‑100 (MQ=255) aaaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt < 1:2419167/100‑1 (MQ=255) aaaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt > 2:2441355/1‑100 (MQ=255) aaaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGt < 1:3657801/100‑1 (MQ=255) aaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTg < 1:638893/100‑1 (MQ=255) aaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTg < 1:128980/100‑1 (MQ=255) aaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTg < 1:2731577/100‑1 (MQ=255) aaTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGGTTATGCAGGATGCGGCGTAAACGCCTTATACGGCCTACAAAATCGTg > 2:2709864/1‑100 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc < 1:3669011/100‑1 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc > 1:4013093/1‑100 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc < 1:2915959/100‑1 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc < 2:2260867/100‑1 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc > 1:2027148/1‑100 (MQ=255) aTTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGc < 1:2609849/100‑1 (MQ=255) aTTAAATACTGCATTCGTCGGCAGCAACAACTGTCAAAAAAGTGCGCTTCGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAAt < 2:590329/95‑1 (MQ=255) aaaTACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTaa < 2:1498026/100‑1 (MQ=255) aaTACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTaa > 2:594036/1‑99 (MQ=255) tACTGCATTTGTCGGCAGCAAAAACTATAAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTc < 2:1157185/100‑1 (MQ=255) gCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCTTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAata < 2:597434/100‑1 (MQ=255) gCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAata < 2:3321544/100‑1 (MQ=255) ttGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATAtt < 1:1718290/100‑1 (MQ=255) ttGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTCATACCGGATGGGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAAGTCAatatat < 2:1828402/99‑1 (MQ=21) gTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGc < 1:2138832/100‑1 (MQ=255) gTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGc > 1:2692019/1‑100 (MQ=255) gTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGc < 1:2285774/100‑1 (MQ=255) tCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCa < 1:3055857/100‑1 (MQ=255) gcagcaACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGa > 2:121712/1‑99 (MQ=255) gcaACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAAcc > 2:129292/1‑100 (MQ=255) acTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAg > 2:3861879/1‑100 (MQ=255) cTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAgg > 1:1080800/1‑100 (MQ=255) gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGcc < 1:3761015/100‑1 (MQ=255) gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGcc < 2:2550784/100‑1 (MQ=255) gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGcc > 2:18568/1‑100 (MQ=255) gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGcc > 2:1905200/1‑100 (MQ=255) gTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGcc > 2:1978084/1‑100 (MQ=255) ttAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCt < 2:694133/100‑1 (MQ=255) tAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTg < 2:2047188/100‑1 (MQ=255) aaaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGa > 2:1775326/1‑100 (MQ=255) aaaaaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGAt > 1:2219291/1‑100 (MQ=255) aaGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAg < 2:1236882/100‑1 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCg > 1:1989255/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAgc < 1:3260538/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAgcg < 2:1210749/100‑1 (MQ=255) ttGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCa < 1:1786537/100‑1 (MQ=255) tttATGCCGGATGCGGCGTAGACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCa > 2:2522420/1‑100 (MQ=255) ttATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAg > 2:2108027/1‑100 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCATACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGAACCtcatca > 2:2894490/5‑99 (MQ=14) aTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGc < 1:3582321/100‑1 (MQ=255) tGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1272924/1‑100 (MQ=255) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTCCAAAATCGTGCTAATTCAACAGATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCCTCAGGc > 2:3272532/2‑99 (MQ=17) gGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 1:2440436‑M1/99‑1 (MQ=255) gGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCa < 2:3516180‑M1/99‑1 (MQ=255) GCCGGATAAGGCGTTTACGCCGCATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAg < 2:3380051‑M1/100‑1 (MQ=255) | CTTCAAAAAATGATTGATGACCTTACGGCGTTTCCTCACGAAAATTAAATACTGCATTTGTCGGCAGCAACAACTGTTAAAAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACAAAATCGTGCTAATTCAATATATTGCAGAAACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAG > NC_000913/2538436‑2538634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |