New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4615442149 (1.010)10 (0.080) 7/158 NT 6.7% coding (102/864 nt) yjjW putative pyruvate formate lyase activating enzyme
?NC_000913 = 4615456 146 (1.120)coding (88/864 nt) yjjW putative pyruvate formate lyase activating enzyme
Rejected: Frequency below cutoff threshold.

Only 100 of 225 total aligned reads displayed.

GCCGTCAACAATCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTT  >  NC_000913/4615343‑4615540
                                                                                                   |                                                                                                   
 ccGTCAACAATCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAgc                                                                                                    >  2:3385811/1‑100 (MQ=255)
   gTCAACAATCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAgcgc                                                                                                  >  1:2608706/1‑100 (MQ=255)
    tCAACAATCTGCAACGCCTGATGTGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑a                                                                                                >  2:1549197/1‑100 (MQ=255)
     caacaaTCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑Ag                                                                                               <  1:729278/100‑1 (MQ=255)
     caacaaTCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑Ag                                                                                               >  1:3885354/1‑100 (MQ=255)
     caacaaTCTGCAACGCCTGATGCGGACACTGGGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑Ag                                                                                               <  1:2264577/100‑1 (MQ=255)
       acaaTCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑a                                                                                                <  2:2456678/97‑1 (MQ=255)
        caaTCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGAtt                                                                                            <  2:864959/100‑1 (MQ=255)
        caaTCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGAtt                                                                                            >  1:693191/1‑100 (MQ=255)
          tcttGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGc                                                                                          <  2:3150304/97‑1 (MQ=255)
           tCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCa                                                                                         >  1:1070810/1‑100 (MQ=255)
           tCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCa                                                                                         <  2:3984312/100‑1 (MQ=255)
             tGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCGCGGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGc                                                                                       <  2:2410247/100‑1 (MQ=255)
             ngCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGc                                                                                       >  2:2228701/2‑100 (MQ=255)
              gCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTgccgcc                                                                                      >  2:1669449/1‑100 (MQ=255)
               cAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCc                                                                                     >  1:2164290‑M2/1‑99 (MQ=255)
               cAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCc                                                                                     <  2:1439986‑M2/100‑2 (MQ=255)
               cAACGCCTGATGCGGACACTGTGGCACGCACTCCACACAGTCATAGCAACGTCCCATCGTCCACGGATTGTGACAGTTTGTGCATCGC‑AGATTGCAGccn                                                                                     <  2:1032535/100‑2 (MQ=255)
                 aCGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctg                                                                                   >  1:2858210‑M2/1‑97 (MQ=255)
                   gCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGggctgcaatctgcgctgca                                                                                  <  1:79723‑M1/100‑20 (MQ=255)
                   gCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgca                                                                                 >  1:2429835‑M2/1‑95 (MQ=255)
                     cTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaa                                                                               >  2:2510655‑M2/1‑93 (MQ=255)
                     cTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaa                                                                               >  1:1395847‑M2/1‑93 (MQ=255)
                      tGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaa                                                                              >  1:2866407‑M2/1‑92 (MQ=255)
                      tGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaa                                                                              >  1:3444001‑M2/1‑92 (MQ=255)
                      tGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATGGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaa                                                                              >  2:1265322‑M2/1‑92 (MQ=255)
                       gATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaaa                                                                             >  1:2890338‑M2/1‑91 (MQ=255)
                        aTGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGggctgcaatctgcgctgcaaaaac                                                                             <  1:1005555‑M1/100‑25 (MQ=255)
                         tGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACa                                                                           <  2:1099431/100‑1 (MQ=255)
                          gCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGggctgcaatctgcgctgcaaaaactg                                                                           <  1:811298‑M1/100‑27 (MQ=255)
                          gCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCAGCGTCCACGGATTGTGACAGTTTTTGCAGggctgcaatctgcgctgcaaaaactg                                                                           <  2:3831637‑M1/100‑27 (MQ=255)
                           cGGACACCGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCAACGTCCACGGATTGTGACAATTTTTGCCCACC‑AGATTGCAGCCCTGCAAAAAAag                                                                          >  2:804123/1‑99 (MQ=255)
                            ggACACTGGGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACagag                                                                        <  2:3882084/100‑1 (MQ=255)
                             gACACTGTGGCACGCACTCCCCGCAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTGTTGCAGggctgcaatcggcgctgcaaaaactgtca                                                                        <  2:860554‑M1/100‑30 (MQ=255)
                                acTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAg                                                                    <  1:383955/100‑1 (MQ=255)
                                acTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAg                                                                    <  1:1913017/100‑1 (MQ=255)
                                 cTGTGGCACGCACTCCCCACAGTCATTGCAACGT‑CCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAgac                                                                  <  1:2035203/100‑1 (MQ=255)
                                   gtgGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAgacg                                                                 <  1:892880/100‑1 (MQ=255)
                                     ggCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAgacgac                                                               >  2:2601980/1‑100 (MQ=255)
                                      gcacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑CGATTCCAGCCCTGCAAAAACAGAGCCAGACGACt                                                              >  1:1281472/1‑100 (MQ=255)
                                       cacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTg                                                             >  1:704563/1‑100 (MQ=255)
                                           cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTg                                                         <  1:2306622/100‑1 (MQ=255)
                                           cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTg                                                         <  1:1772272/100‑1 (MQ=255)
                                             ntCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGc                                                       >  1:1656815/2‑100 (MQ=255)
                                             cTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGc                                                       <  1:1376844/100‑1 (MQ=255)
                                              tCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGcc                                                      <  1:373313/100‑1 (MQ=255)
                                              gtgccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGcc                                                      >  1:2111705/4‑100 (MQ=255)
                                               ccccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGccc                                                     >  2:697737/1‑100 (MQ=255)
                                               ccccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGccc                                                     >  1:438487/1‑100 (MQ=255)
                                                  cacaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTc                                                  <  2:427612/100‑1 (MQ=255)
                                                   acaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATGGCAGCCCTACAAAAACAGAGCCAGACGACTGCCTGGCCCGTCa                                                 <  2:1200140/100‑1 (MQ=255)
                                                    caGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCaa                                                <  2:1414576/100‑1 (MQ=255)
                                                     aGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAc                                               <  1:640363/100‑1 (MQ=255)
                                                     aGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAc                                               <  1:2249009/100‑1 (MQ=255)
                                                     aGTCATCGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCGGCAAATACAGAGCCAGCCGACTGCCTGGCCCGTCacc                                               <  2:1913602/100‑3 (MQ=255)
                                                        cATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCa                                            <  2:138612/100‑1 (MQ=255)
                                                        cATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCa                                            <  1:3808478/100‑1 (MQ=255)
                                                         aTTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg                                           <  2:3613581/100‑1 (MQ=255)
                                                          ttGCAACGTCCCATCGTCCACGTATTGTGACAGGTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAgg                                          <  2:1834779/100‑1 (MQ=255)
                                                           tGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGga                                         >  2:2501709/1‑100 (MQ=255)
                                                            gCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgag                                        <  2:2327900/100‑1 (MQ=255)
                                                             cAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgaga                                       <  1:4131504/100‑1 (MQ=255)
                                                             cAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgaga                                       >  2:1673045/1‑100 (MQ=255)
                                                                 gTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                   <  2:2850375/100‑1 (MQ=255)
                                                                 gTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                   <  2:3748721/100‑1 (MQ=255)
                                                                  tCCCTTCGGCCACGGCTTGCGCCAGTGTTTACA‑CGCGAGGGCGCACCCCCCCAACAAGAGAGGCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                   <  2:2607482/99‑1 (MQ=255)
                                                                  tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg                                  <  2:1015524/100‑1 (MQ=255)
                                                                   cccATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgg                                    <  2:334/97‑1 (MQ=255)
                                                                    ccATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGAt                                >  1:2836998/1‑100 (MQ=255)
                                                                     cATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGAt                                >  1:1512642/1‑99 (MQ=255)
                                                                      aTCGTCCACGGATTGTGACATTTTTTGCAGCGC‑AGCTTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTTGCCCGTCAACGCAGGAGAAGGGGa                                 >  2:3063381/1‑97 (MQ=255)
                                                                            cACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                        >  1:1805554/1‑100 (MQ=255)
                                                                            cACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                        >  2:3057795/1‑100 (MQ=255)
                                                                            cACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                        >  1:3647291/1‑100 (MQ=255)
                                                                            cACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGACCGTCAACGCAGGAGAAGGGGATCATCTTAc                        >  2:514039/1‑100 (MQ=255)
                                                                             aCGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACt                       <  1:3533860/100‑1 (MQ=255)
                                                                              cGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAGACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg                      <  2:2645295/100‑1 (MQ=255)
                                                                              cGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg                      <  2:4088854/100‑1 (MQ=255)
                                                                              cGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg                      <  1:2737583/100‑1 (MQ=255)
                                                                                gATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGAc                    <  1:3137418/100‑1 (MQ=255)
                                                                                gATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCATGGCCCGTCAACGCAGGAGCACGGGATACTCTTACt                       >  2:3233681/1‑97 (MQ=255)
                                                                                 aTTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACt                   <  1:3971474/100‑1 (MQ=255)
                                                                                  ttGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTa                  >  2:884043/1‑100 (MQ=255)
                                                                                    gtgACAGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgt                <  1:1182558‑M2/100‑71 (MQ=255)
                                                                                    gtgACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                <  1:908417/100‑1 (MQ=255)
                                                                                    gtgACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                >  1:1789169/1‑100 (MQ=255)
                                                                                    gtgACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                >  1:1154996/1‑100 (MQ=255)
                                                                                      gACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgc              >  2:724085/1‑100 (MQ=255)
                                                                                       aCAGTTTTTGCAGCGG‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGAAGAAGGGGATAATCTTACTGACTAAAgcg             <  2:1246962/100‑1 (MQ=255)
                                                                                       aCAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcg             >  2:43874/1‑100 (MQ=255)
                                                                                        cAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcgc            >  1:878607/1‑100 (MQ=255)
                                                                                         aGTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgca           <  2:2044204‑M2/100‑76 (MQ=255)
                                                                                          gTTTTTGCAGggctgcaatctgcgctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcat           >  1:2002466‑M1/1‑10 (MQ=255)
                                                                                          gTTTTTGCAGCGC‑AGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgca           <  1:4037780‑M2/99‑76 (MQ=255)
                                                                                           tttttGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc         <  1:3397215/100‑1 (MQ=255)
                                                                                            ttttGCAGggctgcaatctgcgctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcatca         <  1:961460‑M1/100‑93 (MQ=255)
                                                                                               tGCAGggctgcaatctgcgctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcatcaggc      <  2:987005‑M1/100‑96 (MQ=255)
                                                                                                gCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgn      <  2:3787970/98‑2 (MQ=255)
                                                                                                gCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgctg    <  2:2141477/100‑1 (MQ=255)
                                                                                                   gggctgcaatctgcgctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcatcaggcgttg  <  2:791684‑M1/100‑100 (MQ=255)
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GCCGTCAACAATCTGCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGC‑AGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTT  >  NC_000913/4615343‑4615540

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.