New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4615442149 (1.010)10 (0.080) 7/158 NT 6.7% coding (102/864 nt) yjjW putative pyruvate formate lyase activating enzyme
?NC_000913 = 4615456 146 (1.120)coding (88/864 nt) yjjW putative pyruvate formate lyase activating enzyme
Rejected: Frequency below cutoff threshold.

Only 100 of 185 total aligned reads displayed.

GCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGCTTATCACGC  >  NC_000913/4615357‑4615555
                                                                                                    |                                                                                                   
gCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTgccgcc                                                                                                     >  2:1669449/1‑100 (MQ=255)
gCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGcc                                                                                                     >  2:1710898/1‑100 (MQ=255)
 cAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCc                                                                                                    <  2:791684‑M2/100‑2 (MQ=255)
   aCGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctg                                                                                                  >  1:2858210‑M2/1‑97 (MQ=255)
     gCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgca                                                                                                <  2:987005‑M2/100‑6 (MQ=255)
     gCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgca                                                                                                >  1:2429835‑M2/1‑95 (MQ=255)
       cTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaa                                                                                              >  2:2510655‑M2/1‑93 (MQ=255)
        tGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaa                                                                                             >  1:3444001‑M2/1‑92 (MQ=255)
        tGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATGGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaa                                                                                             >  2:1265322‑M2/1‑92 (MQ=255)
         gATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaa                                                                                            >  1:2890338‑M2/1‑91 (MQ=255)
          aTGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaac                                                                                           >  1:2002466‑M2/1‑90 (MQ=255)
              ggACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACagag                                                                                       >  1:4049466/1‑100 (MQ=255)
              ggACACTGGGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACagag                                                                                       <  2:3882084/100‑1 (MQ=255)
                acacTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGcc                                                                                     <  2:1563305/100‑1 (MQ=255)
                    tgtgGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAg                                                                                   <  2:833303/98‑1 (MQ=255)
                       ggCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAgacgac                                                                              >  2:2601980/1‑100 (MQ=255)
                        gcacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCCGATTCCAGCCCTGCAAAAACAGAGCCAGACGACt                                                                             >  1:1281472/1‑100 (MQ=255)
                         cacgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTg                                                                            >  1:2255216/1‑100 (MQ=255)
                         cacgcacTCCCCACAGTCATTGCAACGGCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTg                                                                            <  2:1521940/100‑1 (MQ=255)
                         cacgcacTCCCCACAGTCATCGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTg                                                                            <  1:1806558/100‑1 (MQ=255)
                          acgcacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGc                                                                           >  1:2035340/1‑100 (MQ=255)
                             cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTg                                                                        <  1:1772272/100‑1 (MQ=255)
                             cacTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTg                                                                        <  1:2274402/100‑1 (MQ=255)
                              acTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTgg                                                                       <  2:308603/100‑1 (MQ=255)
                               cTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGc                                                                      >  1:2225455/1‑100 (MQ=255)
                               cTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGc                                                                      <  1:1376844/100‑1 (MQ=255)
                                 ccccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGccc                                                                    >  2:697737/1‑100 (MQ=255)
                                  cccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCg                                                                   <  2:2608690/100‑1 (MQ=255)
                                   ccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGt                                                                  >  2:1940563/1‑100 (MQ=255)
                                   ccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGt                                                                  >  1:696453/1‑100 (MQ=255)
                                   ccACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGt                                                                  >  1:373215/1‑100 (MQ=255)
                                    cacaGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTc                                                                 <  1:3858110/100‑1 (MQ=255)
                                      caGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCaa                                                               <  2:1414576/100‑1 (MQ=255)
                                       aGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAAc                                                              <  1:640363/100‑1 (MQ=255)
                                         tCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGc                                                            <  2:408584/100‑1 (MQ=255)
                                         tCAGTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACg                                                             <  2:1332467/99‑1 (MQ=255)
                                           aTTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg                                                          <  1:111065/100‑1 (MQ=255)
                                           aTTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg                                                          <  2:3613581/100‑1 (MQ=255)
                                           aTTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAg                                                          <  1:3623245/100‑1 (MQ=255)
                                              gCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgag                                                       <  2:2327900/100‑1 (MQ=255)
                                              gCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgag                                                       >  1:1643301/1‑100 (MQ=255)
                                               cAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgaga                                                      <  1:4131504/100‑1 (MQ=255)
                                               cAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGgaga                                                      >  2:1673045/1‑100 (MQ=255)
                                                   gTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                                  <  2:3058828/100‑1 (MQ=255)
                                                   gTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                                  <  1:740897/100‑1 (MQ=255)
                                                    tCCCTTCGGCCACGGCTTGCGCCAGTGTTTACACGCGAGGGCGCACCCCCCCAACAAGAGAGGCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAggg                                                  <  2:2607482/99‑1 (MQ=255)
                                                    tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg                                                 <  2:1212362/100‑1 (MQ=255)
                                                    tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg                                                 <  2:1015524/100‑1 (MQ=255)
                                                    tCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgggg                                                 >  2:423622/1‑100 (MQ=255)
                                                     cccATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAgg                                                   <  2:334/97‑1 (MQ=255)
                                                       cATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGAt                                               >  1:1512642/1‑99 (MQ=255)
                                                           gTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCt                                          <  2:435706/100‑1 (MQ=255)
                                                              cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                                       >  1:3647291/1‑100 (MQ=255)
                                                              cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                                       <  2:107356/100‑1 (MQ=255)
                                                              cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                                       >  2:3057795/1‑100 (MQ=255)
                                                              cACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTAc                                       >  1:1805554/1‑100 (MQ=255)
                                                               aCGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACt                                      <  1:3533860/100‑1 (MQ=255)
                                                                cGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg                                     <  1:2737583/100‑1 (MQ=255)
                                                                cGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTg                                     >  1:3834426/1‑100 (MQ=255)
                                                                  gATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGAc                                   <  1:3137418/100‑1 (MQ=255)
                                                                  gATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGAc                                   <  2:3748790/100‑1 (MQ=255)
                                                                  gATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCATGGCCCGTCAACGCAGGAGCACGGGATACTCTTACt                                      >  2:3233681/1‑97 (MQ=255)
                                                                   aTTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACt                                  <  1:716074/100‑1 (MQ=255)
                                                                      gtgACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgt                               <  1:1182558‑M2/100‑71 (MQ=255)
                                                                      gtgACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                               <  1:908417/100‑1 (MQ=255)
                                                                      gtgACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                               >  1:122862/1‑100 (MQ=255)
                                                                      gtgACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTaaa                               >  1:1789169/1‑100 (MQ=255)
                                                                       tgACAGTTTTTGCAGCGCCGATTGCAGCCctgcaacaactgtcacaatccgtggacgatgggacgttgcaatgactgcggggagtgcgtgccacagtgtc                              <  2:860554‑M2/100‑72 (MQ=255)
                                                                       tgACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAg                              <  1:3905706/100‑1 (MQ=255)
                                                                        gACAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtcc                             <  2:671309‑M2/100‑73 (MQ=255)
                                                                        gACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgc                             >  2:724085/1‑100 (MQ=255)
                                                                         aCAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcg                            >  2:2667089/1‑100 (MQ=255)
                                                                         aCAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcg                            <  1:2769999/100‑1 (MQ=255)
                                                                          cAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtctcaatccgtggacgatgggacgtgacaatggctgtggggactgcgtgccacggtgtccgc                           <  2:2376277‑M2/100‑75 (MQ=255)
                                                                          cAGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgctgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgc                           <  2:3831637‑M2/100‑75 (MQ=255)
                                                                          cAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAgcgc                           >  1:878607/1‑100 (MQ=255)
                                                                           aGTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgca                          <  2:2044204‑M2/100‑76 (MQ=255)
                                                                            gTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcat                         <  1:1005555‑M2/100‑77 (MQ=255)
                                                                            gTTTTTGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgca                          <  1:4037780‑M2/99‑76 (MQ=255)
                                                                            gTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCAt                         <  1:43874/100‑1 (MQ=255)
                                                                            gTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCAt                         <  2:4049439/100‑1 (MQ=255)
                                                                             tttttGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc                        <  1:3397215/100‑1 (MQ=255)
                                                                             tttttGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATc                        <  2:504949/100‑1 (MQ=255)
                                                                              ttttGCAGCGCAGATTGCAGCCCTGCAAAAACATAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATct                       >  2:1881393/1‑100 (MQ=255)
                                                                              ttttGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATct                       >  1:3778032/1‑100 (MQ=255)
                                                                                ttGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgc                     >  1:2114967/1‑100 (MQ=255)
                                                                                 tGCAGCGCAGATTGCAGCCctgcaaaaactgtcacaatccgtggacgatgggacgttgcaatgactgtggggagtgcgtgccacagtgtccgcatcaggc                    <  1:79723‑M2/100‑82 (MQ=255)
                                                                                 tGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgct                    <  1:2605144/100‑1 (MQ=255)
                                                                                  gCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGATAAGGGGATAAGCTTACTGACTAAAGCGCATctgctg                   <  1:2837596/100‑1 (MQ=255)
                                                                                  gCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgn                     <  2:3787970/98‑2 (MQ=255)
                                                                                  gCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATctgctg                   <  2:2141477/100‑1 (MQ=255)
                                                                                  gCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACGGCCTAAAGCGCATctgctg                   >  2:1144927/1‑100 (MQ=255)
                                                                                   cAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGt                  <  2:3252437/100‑1 (MQ=255)
                                                                                          aGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATgg            >  2:1054973/1‑100 (MQ=255)
                                                                                           gATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGc           <  1:1468074/100‑1 (MQ=255)
                                                                                           gATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGc           >  1:1852415/1‑100 (MQ=255)
                                                                                           gATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGc           <  1:1446094/100‑1 (MQ=255)
                                                                                            aTTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGCt          <  1:1710910/100‑1 (MQ=255)
                                                                                             ttGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGCtt         >  1:899769/1‑100 (MQ=255)
                                                                                                    ccTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGCTTATCAcgc  >  2:3010596/1‑100 (MQ=255)
                                                                                                    |                                                                                                   
GCAACGCCTGATGCGGACACTGTGGCACGCACTCCCCACAGTCATTGCAACGTCCCATCGTCCACGGATTGTGACAGTTTTTGCAGCGCAGATTGCAGCCCTGCAAAAACAGAGCCAGACGACTGCCTGGCCCGTCAACGCAGGAGAAGGGGATAATCTTACTGACTAAAGCGCATCTGCTGTTCATGGCTTATCACGC  >  NC_000913/4615357‑4615555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.