| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4421 | 109 (0.780) | 20 (0.150) | 6/168 | NT | 17.3% | coding (688/1287 nt) | thrC | L‑threonine synthase |
| ? | NC_000913 | = 4450 | 89 (0.680) | coding (717/1287 nt) | thrC | L‑threonine synthase | |||||
GGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4318‑4421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAACCC < NC_000913/4450‑4352 GGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAA < 1:207002/100‑1 ccgatctATGATGAAGAACTGAAAGTGTCTCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAG < 1:1744166/93‑1 GCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGTGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAG < 2:3199268/100‑1 GCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAG < 1:3927963/100‑1 GCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAG < 1:3445035/100‑1 CGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCCGCCATTTGCTGGCGCAGACTTGCCACTACTTTGAAGC > 2:2424382/1‑100 GTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT > 1:272445/1‑100 ATGATGAAGAACTGAAAGTGGCGGTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGagatcgg > 2:1744151/1‑93 gatctGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGC < 2:433530/95‑1 AGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAAC < 2:1637150/100‑1 GGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAgaac > 1:433536/1‑96 GGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 2:648419/100‑1 GGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 1:3903588/100‑1 GGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 1:3903505/100‑1 GGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 1:270257/100‑1 GTTAAACTCGGCTAACTCGATTAACATCAGTCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGC < 1:77625/100‑1 GTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 2:3913715/100‑1 GTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAG < 1:1467803/100‑1 GTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGC < 1:565691/100‑1 TAAACTCTGCTAACTCAATTAACATCATCCTTTTGCTGGCACAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACA < 1:377338/96‑1 AAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCT‑GTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTC < 1:2198492/100‑1 CTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAA < 1:1410158/100‑1 CTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCT < 2:1292200/96‑1 TCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAA < 1:2300100/100‑1 TCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAA < 1:1424614/100‑1 CGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAG < 2:1362010/100‑1 CGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAG < 2:3084954/100‑1 ACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAG < 1:172032/100‑1 AGCTGGTTGCGCGTTTCCTGCGGCAGCTGCGTAACAGCTTTAAAGTAGTAGTAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTA < 1:783363/100‑1 AGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTA < 1:69136/100‑1 AGCTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTA > 1:1640462/1‑100 CTGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAAC < 2:2993430/100‑1 CTGCTTGCGCGTCTCCTGCGGCAGCTGCTCAACAGCGGCAAACTAGTAGCAAATCTGCTCCAGCAACCGGCTGATGTTAATCGAGTTAGCCGAGTT < 2:2975393/96‑1 TGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAACC < 1:2701415/100‑1 TGGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAACC < 1:2986803/100‑1 GGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAACCC > 1:3029325/1‑100 GGCGTTTGATGATGAAGAACTGAAAGTGGCGCTAGGGTTAAACTCGGCTAACTCGATTAACATCAGCCGTTTGCTGGCGCAGATTTGCTACTACTTTGAAGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4318‑4421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agctgGTTGCGCGTCTCCTGCGGCAGCTGCGCAACAGCTTCAAAGTAGTAGCAAATCTGCGCCAGCAAACGGCTGATGTTAATCGAGTTAGCCGAGTTTAACCC < NC_000913/4450‑4352 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |