New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 50327 =NA (NA)10 (0.080) 5/164 NT NA noncoding (1/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 50360 = NA (NA)noncoding (34/37 nt) REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 180 total aligned reads displayed.

TATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGC  >  NC_000913/50229‑50425
                                                                                                  |                                                                                                  
tATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAgcgc                                                                                                   >  2:1737978/1‑100 (MQ=255)
 tgcgctgggaagataaacagtattttgtccagccgttgaatcggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGcc                                                                                                  >  1:1155356‑M1/98‑100 (MQ=255)
  gcgctgggaagataaatagtattttgtccagccgtcgaaccgacataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCg                                                                                                 >  1:671953‑M1/97‑100 (MQ=255)
  gcgctgggaagataaacagtattttgtccagccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCg                                                                                                 >  1:37570‑M1/97‑100 (MQ=255)
    cAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGa                                                                                               <  1:919610/100‑1 (MQ=255)
     ctgggaagataaacagtattttgtccagccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGAt                                                                                              >  2:513018‑M1/94‑100 (MQ=255)
     atctgaagataaacagtattttgtccagccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGAt                                                                                              >  2:3259213‑M1/94‑100 (MQ=255)
     aGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAt                                                                                              <  2:2995746/100‑1 (MQ=255)
     aGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAt                                                                                              >  1:874674/1‑100 (MQ=255)
     aGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAt                                                                                              <  1:3143780/100‑1 (MQ=255)
      tgggaagataaacagtattttgtccagccgtcgaaccggcatagggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGatn                                                                                             >  2:2497517‑M1/93‑99 (MQ=255)
      gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATg                                                                                             <  2:2927812/100‑1 (MQ=255)
      gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATg                                                                                             >  1:2087166/1‑100 (MQ=255)
      gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTAAGGCTAGCGCCGGATg                                                                                             >  2:2354095/1‑100 (MQ=255)
      gCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGAAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGAt                                                                                              >  1:1030188/1‑99 (MQ=255)
       cGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGc                                                                                            >  1:3100315/1‑100 (MQ=255)
       cGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGc                                                                                            <  2:3409172/100‑1 (MQ=255)
        gAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCg                                                                                           >  2:57206/1‑100 (MQ=255)
        gAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCg                                                                                           <  1:2989224/100‑1 (MQ=255)
        gAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCg                                                                                           <  1:2944539/100‑1 (MQ=255)
         aaTTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCAAGCGCCGGATGCGa                                                                                          >  2:2669899/1‑100 (MQ=255)
          aTTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGAc                                                                                         <  2:1029858/100‑1 (MQ=255)
          aTTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACCGCTAGCGCCGGATGCGAc                                                                                         >  2:2737638/1‑100 (MQ=255)
             ccACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTATGGCTAGCGCCGGAtaagacgcg                                                                                      >  2:1186203/1‑92 (MQ=255)
             ccACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGcc                                                                                      >  1:3428252/1‑100 (MQ=255)
             ccACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGcc                                                                                      >  1:263832/1‑100 (MQ=255)
             ccACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGcc                                                                                      >  2:3334590/1‑100 (MQ=255)
             ccACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGcc                                                                                      <  2:3761898/100‑1 (MQ=255)
               aCGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTATCGCCGGATGCGACGCCg                                                                                     >  2:1889843/1‑99 (MQ=255)
                cGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCAGCAATAATTTTGTATAAAATTTACGGCTAGCGCCGGATGCGACGCCGGt                                                                                   >  1:21049/1‑100 (MQ=255)
                cGATGCTGATGCGCAGAACCCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGTGACGc                                                                                       <  2:3500048/96‑1 (MQ=255)
                 gATGCTGATGCGCAGAACTCGCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTc                                                                                  <  2:1166461/100‑1 (MQ=255)
                  aTGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTcg                                                                                 <  2:894201/100‑1 (MQ=255)
                    gCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTcgcg                                                                               <  1:1736317/100‑1 (MQ=255)
                      tGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCTGGTCGCGTc                                                                             <  1:3283034/100‑1 (MQ=255)
                        aTGCGTAGAACTCTCACAGCTATTGCGTTGATATTCTGGAGTGTGGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCt                                                                            <  1:2213009/99‑1 (MQ=255)
                         tGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTa                                                                          <  2:847361/100‑1 (MQ=255)
                          gtgcAGAACTCTCACAGCTATTGCTTTGAGATACTGGAGCGGCGGTAATTTTGTATAGAATTTACAGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTAt                                                                         >  2:151296/3‑100 (MQ=255)
                          gcgcAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTAt                                                                         >  1:2762393/1‑100 (MQ=255)
                            gcAGAACTCTTACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATcc                                                                       <  1:2959809/100‑1 (MQ=255)
                            gcAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATcc                                                                       <  1:2912218/100‑1 (MQ=255)
                             cAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCg                                                                      >  1:1092992/1‑100 (MQ=255)
                             cAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCg                                                                      >  2:3658329/1‑100 (MQ=255)
                             cAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCg                                                                      >  2:3804403/1‑100 (MQ=255)
                              cagaatctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGACTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCgg                                                                     >  1:314308/6‑100 (MQ=37)
                               gAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGc                                                                    >  1:470987/1‑100 (MQ=255)
                               gAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGc                                                                    <  1:2834/100‑1 (MQ=255)
                               gAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGc                                                                    <  1:185746/100‑1 (MQ=255)
                                gccgtcgcaccggaataaggattttggcgaagtggtggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                   >  1:1744145‑M1/67‑100 (MQ=255)
                                gccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                   >  2:3856808‑M1/67‑100 (MQ=255)
                                gccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                   >  1:252955‑M1/67‑100 (MQ=255)
                                  ctctCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCtt                                                                 >  1:1346916/1‑100 (MQ=255)
                                  atctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCTCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCtt                                                                 >  1:535735/2‑100 (MQ=38)
                                    ctcACCGCTATTCCTTTGAGATTCTGGAGCGGCGGTAATTTTATATAGAATTTACGGCTAGCGCCCGATGCGCCGCCGGTCGCGCCTTATACGGCCTTcc                                                               >  2:2587006/1‑100 (MQ=255)
                                    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                               <  2:54916/100‑1 (MQ=255)
                                    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                               <  1:2283240/100‑1 (MQ=255)
                                    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                               <  2:794957/100‑1 (MQ=255)
                                     ctaactggtataaggatttggtcgaagcgtctgcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                   >  1:161231‑M1/62‑95 (MQ=255)
                                        caGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCtata                                                           >  2:353135/1‑100 (MQ=255)
                                         aGCTGTTGTTTTGATATTCTGGATCGGCGGTAATTTTGTATATTATTTACGTCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCtata                                                           <  1:1297474/99‑1 (MQ=37)
                                            tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATccg                                                       >  2:2584785/1‑98 (MQ=255)
                                            tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAg                                                       >  2:1475050/1‑100 (MQ=255)
                                             aTTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAgg                                                      >  1:76224/1‑100 (MQ=255)
                                              ttGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGc                                                     <  1:3658368/100‑1 (MQ=255)
                                                gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGACAGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtg                                                   >  1:1178091/1‑100 (MQ=255)
                                                 cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                  >  2:1731301/1‑100 (MQ=255)
                                                 cTTTGAGATTCTGGAGCGGCGATAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                  >  2:1798295/1‑100 (MQ=255)
                                                  tttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgtg                                                 >  2:2924107/1‑100 (MQ=255)
                                                   ttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTgtgt                                                >  2:600505/1‑100 (MQ=255)
                                                     gagaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGttt                                              >  2:1399596/1‑100 (MQ=255)
                                                     gagaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGttt                                              >  1:440381/1‑100 (MQ=255)
                                                      agaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTa                                             <  1:600512/100‑1 (MQ=255)
                                                       gaTTCTGGAGCGGCGGTAATTTTGTCTAGAATTTACGTCTAGCGCCGGATGCGACGCCGGTCGCATCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                            >  1:3219659/1‑100 (MQ=255)
                                                        aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                           <  1:1502625/100‑1 (MQ=255)
                                                           cTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcg                                        <  2:774908/100‑1 (MQ=255)
                                                            tGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgc                                       >  1:3559449/1‑100 (MQ=255)
                                                                gcggcgGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgcc                                   <  1:1957013/100‑1 (MQ=255)
                                                                gcggcgGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcg                                        <  2:1106459/95‑1 (MQ=255)
                                                                  ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgccgc                                 >  1:935467/1‑100 (MQ=255)
                                                                  ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccg                                     >  2:709462/1‑96 (MQ=255)
                                                                    cggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCtt                               >  2:3103543/1‑100 (MQ=255)
                                                                     ggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                              >  1:3374465/1‑100 (MQ=255)
                                                                     ggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                              >  1:2441739/1‑100 (MQ=255)
                                                                     gcgtcttaaacacagcctgatataggaagGCCGGATAAGACGCCGGTCGTGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                              >  2:2202725‑M1/30‑100 (MQ=255)
                                                                       tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                            <  2:2947853/100‑1 (MQ=255)
                                                                        aaTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGcc                           <  1:146902/100‑1 (MQ=255)
                                                                          ttttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGTCTGTATTTAAGACGCAGCCGCTTCGc                            >  1:3806776/1‑97 (MQ=255)
                                                                           tttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCaa                        >  2:171940/1‑100 (MQ=255)
                                                                             tGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAAt                      <  2:1146594/100‑1 (MQ=255)
                                                                              gTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                     <  2:470980/100‑1 (MQ=255)
                                                                               tataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATcc                    <  1:101552/100‑1 (MQ=255)
                                                                                ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                   >  1:224323/1‑100 (MQ=255)
                                                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCTGGCTGTGTTTAAGACGTCGCCGCTTCGCCCAAATCCTTATGCCGGtt         <  2:2213733/100‑1 (MQ=255)
                                                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGTCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt         <  2:2947404/100‑1 (MQ=255)
                                                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt         >  2:592427/1‑100 (MQ=255)
                                                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt         <  1:3782910/100‑1 (MQ=255)
                                                                                             cTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCg       <  1:634878/99‑1 (MQ=255)
                                                                                               aGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACg    <  1:731385/100‑1 (MQ=255)
                                                                                                 cgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc  <  1:1528996/100‑1 (MQ=255)
                                                                                                 cgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc  <  2:769303/100‑1 (MQ=255)
                                                                                                  |                                                                                                  
TATTCAGCGAATTCCACGATGCTGATGCGCAGAACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGC  >  NC_000913/50229‑50425

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.