BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	50327 =	NA (NA)	10 (0.080)	5/164	NT	NA	noncoding (1/37 nt)	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	50360 =	NA (NA)	10 (0.080)	5/164	NT	NA	noncoding (34/37 nt)	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 158 total aligned reads displayed.

AACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG  >  NC_000913/50261‑50457

gccgtcgaaccggcataaggatttgggcgaagcggcgtcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                                                   >  1:3497934‑M1/67‑100 (MQ=255)

gccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                                                   >  1:3763383‑M1/67‑100 (MQ=255)

gccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                                                   >  1:252955‑M1/67‑100 (MQ=255)

gccgtcgaaccggcataaggatttgggcgaagcggcggcgtcttaaacacagcctgatataggaagGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                                                   >  2:3856808‑M1/67‑100 (MQ=255)

gaatctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGcc                                                                                                   >  1:2947879/4‑100 (MQ=38)

 aatctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACAGCTAGCGCCGGATACGACGCAGGTCGCGTCTTATCCGGCCt                                                                                                  >  1:1081734/3‑100 (MQ=37)

  ctctCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCtt                                                                                                 >  1:1346916/1‑100 (MQ=255)

  atctcAAAGCAATAGCTGTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCTCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCtt                                                                                                 >  1:535735/2‑100 (MQ=38)

   tctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTc                                                                                                <  2:1389538/100‑1 (MQ=255)

    ctcACCGCTATTCCTTTGAGATTCTGGAGCGGCGGTAATTTTATATAGAATTTACGGCTAGCGCCCGATGCGCCGCCGGTCGCGCCTTATACGGCCTTcc                                                                                               >  2:2587006/1‑100 (MQ=255)

    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               >  1:3700831/1‑100 (MQ=255)

    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  1:2283240/100‑1 (MQ=255)

    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  2:54916/100‑1 (MQ=255)

    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  2:794957/100‑1 (MQ=255)

    ctcACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTcc                                                                                               <  1:1737993/100‑1 (MQ=255)

      cacaGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCta                                                                                             <  2:5391/100‑1 (MQ=255)

        caGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCtata                                                                                           >  2:353135/1‑100 (MQ=255)

         aGCTGTTGTTTTGATATTCTGGATCGGCGGTAATTTTGTATATTATTTACGTCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCtata                                                                                           <  1:1297474/99‑1 (MQ=37)

            tATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATccg                                                                                       >  2:2584785/1‑98 (MQ=255)

              ttGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGc                                                                                     <  1:1106541/100‑1 (MQ=255)

              ttGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAAGTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGc                                                                                     <  2:2924591/100‑1 (MQ=255)

                gCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtg                                                                                   <  2:76221/100‑1 (MQ=255)

                 cTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgt                                                                                  >  1:614183/1‑100 (MQ=255)

                  tttGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCtgtg                                                                                 >  2:2924107/1‑100 (MQ=255)

                    tGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGtt                                                                               <  2:2667846/100‑1 (MQ=255)

                      agaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTa                                                                             <  1:3177405/100‑1 (MQ=255)

                       gaTTCTGGAGCGGCGGTAATTTTGTCTAGAATTTACGTCTAGCGCCGGATGCGACGCCGGTCGCATCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                                                            >  1:3219659/1‑100 (MQ=255)

                       gaTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTaa                                                                            >  2:2449762/1‑100 (MQ=255)

                        aTTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAg                                                                           <  1:1502625/100‑1 (MQ=255)

                           cTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcg                                                                        <  2:774908/100‑1 (MQ=255)

                            tGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgc                                                                       >  1:3559449/1‑100 (MQ=255)

                            tGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGACCATCCTATATCAAAATGAGTTTAAGAcgc                                                                       >  1:1486975/1‑100 (MQ=38)

                            gaagcggcggcgtcttaaacacagcctgatataggaaggccggataagacacgaccggcgtcttatccggcCTTCCTATATCAGGCTGTGTTTAAGAcgc                                                                       >  2:2202725‑M2/72‑100 (MQ=255)

                             ggAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgcc                                                                      >  2:666777/1‑100 (MQ=255)

                              gtgcggcgGTAATTTTGGATAGAATTTACGGCTAGAGCCGGATGCGACGCCTGTAGCGTCTTATCCGGACTTCCTATATCAGGCTGTCTTTAAGAcgccg                                                                     >  2:1507539/3‑100 (MQ=38)

                                gcggcgATAATTTTGCACAGCACCTACGGCTAGCCCAGCATGCGACGCCGGTTGCGTCTTATCCGCCCTTCCTATATCAGGATGTGTACAAGatgtcgg                                                                    <  2:372716/99‑7 (MQ=255)

                                  ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATTCCACGCCGGTCACGTCTTATCCGGCCTTCCTATATCAGGCTAAGTTTAATAcgccgcc                                                                   >  1:2032797/1‑98 (MQ=255)

                                  ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccgccgc                                                                 >  1:935467/1‑100 (MQ=255)

                                  ggcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGAcgccg                                                                     >  2:709462/1‑96 (MQ=255)

                                   gcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCt                                                                <  2:188903/100‑1 (MQ=255)

                                   gcggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGAAGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCt                                                                >  2:1774384/1‑100 (MQ=255)

                                    cggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCtt                                                               >  2:3103543/1‑100 (MQ=255)

                                     ggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                                                              >  1:3374465/1‑100 (MQ=255)

                                     ggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                                                              >  1:2441739/1‑100 (MQ=255)

                                     ggTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTc                                                              >  1:2966421/1‑100 (MQ=255)

                                       tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                                                            <  1:2796896/100‑1 (MQ=255)

                                       tAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGc                                                            >  2:2692610/1‑100 (MQ=255)

                                        aaTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGcc                                                           <  1:146902/100‑1 (MQ=255)

                                        aaTTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGcc                                                           <  2:874663/100‑1 (MQ=255)

                                          ttttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGTCTGTATTTAAGACGCAGCCGCTTCGc                                                            >  1:3806776/1‑97 (MQ=255)

                                           tttGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCaa                                                        >  2:171940/1‑100 (MQ=255)

                                             tGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAAt                                                      <  2:1146594/100‑1 (MQ=255)

                                              gTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATc                                                     <  2:470980/100‑1 (MQ=255)

                                               tataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATcc                                                    <  1:101552/100‑1 (MQ=255)

                                                ataGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCt                                                   <  1:26220/100‑1 (MQ=255)

                                                 taGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCtt                                                  >  1:741112/1‑100 (MQ=255)

                                                  aGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTa                                                 <  2:1406605/100‑1 (MQ=255)

                                                   gAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGACTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTAt                                                <  2:1124726/100‑1 (MQ=255)

                                                       ttACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCg                                            <  1:514696/100‑1 (MQ=255)

                                                        tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCgg                                           <  2:1035501/100‑1 (MQ=255)

                                                        tACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCgg                                           <  2:599200/100‑1 (MQ=255)

                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCTGGCTGTGTTTAAGACGTCGCCGCTTCGCCCAAATCCTTATGCCGGtt                                         <  2:2213733/100‑1 (MQ=255)

                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGTCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt                                         <  2:2947404/100‑1 (MQ=255)

                                                          cGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt                                         >  2:592427/1‑100 (MQ=255)

                                                           ggCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGtt                                         <  1:3783511/99‑1 (MQ=255)

                                                           ggCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTc                                        <  1:2260862/100‑1 (MQ=255)

                                                             cTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCg                                       <  1:634878/99‑1 (MQ=255)

                                                               aGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACg                                    <  1:731385/100‑1 (MQ=255)

                                                                 ggccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc                                  >  2:3856808‑M2/35‑100 (MQ=255)

                                                                 ggccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc                                  >  1:3763383‑M2/35‑100 (MQ=255)

                                                                 ggccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCACCACTTCGCCAAAATCCTTATTCCGGTGCGACGGc                                  >  1:1744145‑M2/35‑100 (MQ=255)

                                                                 ggccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCAGACGCTTCGACCAAATCCTTATACCagttag                                       >  1:161231‑M2/35‑93 (MQ=255)

                                                                 ctCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACgg                                   >  2:1410552‑M1/3‑99 (MQ=255)

                                                                 cgcCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGc                                  <  1:1528996/100‑1 (MQ=255)

                                                                  gccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCt                                 >  1:858863‑M2/34‑100 (MQ=255)

                                                                   ccggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTg                                >  1:1584364‑M2/33‑100 (MQ=255)

                                                                     ggataagacgcgaccggcgtcgcatccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              >  2:2984579‑M2/31‑100 (MQ=255)

                                                                     GGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              >  2:2431340‑M1/1‑100 (MQ=255)

                                                                     GGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              >  2:3100287‑M1/1‑100 (MQ=255)

                                                                     GGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGa                              <  2:2967266‑M1/100‑1 (MQ=255)

                                                                       ATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACa                            <  1:3267335‑M1/100‑1 (MQ=255)

                                                                          cGACGCCGGTCGCGTCTTATCCTGCTTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACaaaa                         <  1:999772/100‑1 (MQ=255)

                                                                           gACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGTTGTGTTTAAGACGCTGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        <  1:2070973/100‑1 (MQ=255)

                                                                              gCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAAt                        <  2:3755096/97‑1 (MQ=255)

                                                                                cGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGt                   <  1:2240442/100‑1 (MQ=255)

                                                                                cGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGt                   <  2:836211/100‑1 (MQ=255)

                                                                                  gTCGCGTCTTATCCGGCCTTCCTATATCATGCTGTGTTTAAGATGTCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGttt                 <  1:194583/100‑1 (MQ=255)

                                                                                  gTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCGCAAATCCGTATGCCGGTTCGACGGCTGGACAAAATACTGttt                 <  1:945517/100‑1 (MQ=255)

                                                                                   tCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTa                <  1:2692634/100‑1 (MQ=255)

                                                                                   tCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTa                <  1:3334627/100‑1 (MQ=255)

                                                                                       gTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCtt            >  1:1877624/1‑100 (MQ=255)

                                                                                       gTCTTATCCGGCCTTCCTATAACAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCtt            <  2:974230/100‑1 (MQ=255)

                                                                                         cTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTcc          <  2:1763238/100‑1 (MQ=255)

                                                                                         cTTATCCGGCCTTCATATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTcc          <  1:3275842/100‑1 (MQ=255)

                                                                                           tATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTccag        >  2:3275810/1‑98 (MQ=255)

                                                                                           natccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCCTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCa        >  2:2497517‑M2/9‑100 (MQ=255)

                                                                                            atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTAtcttcagat       >  2:3259213‑M2/8‑96 (MQ=255)

                                                                                            atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAg       <  1:3569080‑M2/93‑1 (MQ=255)

                                                                                                ggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGATTCAACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCa   >  1:1155356‑M2/4‑100 (MQ=255)

                                                                                                 gcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAg  <  1:449933‑M2/98‑1 (MQ=255)

AACTCTCACAGCTATTGCTTTGAGATTCTGGAGCGGCGGTAATTTTGTATAGAATTTACGGCTAGCGCCGGATGCGACGCCGGTCGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG  >  NC_000913/50261‑50457

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.