New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)14 (0.110) 6/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 186 total aligned reads displayed.

AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903
                                                                                                  |                                                                                                   
agCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGt                                                                                                    <  1:2969149/100‑1 (MQ=255)
 gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   <  2:2999734/100‑1 (MQ=255)
 gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   <  1:2273346/100‑1 (MQ=255)
 gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   >  1:1588746/1‑100 (MQ=255)
 gcgcGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   >  1:1235292/1‑100 (MQ=255)
  taggtcggataagatgcgcaagcatcgcagccgacgataagtgccggatgctgcgaaaatgccttatctggcctatagattcgatgcgattcgtagGTCg                                                                                                  >  2:3429347‑M1/97‑100 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTc                                                                                                   >  1:954247/1‑99 (MQ=255)
  cgcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCg                                                                                                  >  1:3428053/1‑100 (MQ=255)
   gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCgg                                                                                                 >  1:3326286/1‑100 (MQ=255)
    ggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgctgcgattcgtagg                                                                                                     <  2:1796569‑M1/1‑1 (MQ=255)
    ggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGga                                                                                                >  1:1966150‑M1/95‑100 (MQ=255)
     gtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGgat                                                                                               >  2:563‑M1/94‑100 (MQ=255)
      tcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacacattcgatgcgattcgtagGTCggag                                                                                               <  2:3326250‑M1/7‑2 (MQ=255)
       gaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgc                                                                                             >  2:3400859/1‑100 (MQ=255)
       gaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgc                                                                                             >  2:40266/1‑100 (MQ=255)
        aTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcg                                                                                            <  1:1088889/100‑1 (MQ=255)
            tCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatgc                                                                                        >  1:2471447/1‑100 (MQ=255)
                 gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  1:1449625/100‑1 (MQ=255)
                   ggggAGTTTCATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGCAGGTCGCATTCGGCACTTATTGTCGGATGCCATGCTTGCGCa                                                                                 <  2:1745902/100‑1 (MQ=38)
                     gTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                                                                               >  2:539057/1‑100 (MQ=255)
                     gTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATc                                                                               >  2:2897490/1‑100 (MQ=255)
                      tAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                                                                              <  2:1916602/100‑1 (MQ=255)
                      tAGTTTGATCAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCt                                                                              >  2:2005198/1‑100 (MQ=255)
                        gTTTGATTAACTTCAATAAAAACCGTGAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTGGGCACTTCTTGTCGGATGCGATGCTTGCGCAt                                                                                >  2:2095371/1‑96 (MQ=255)
                        gTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa                                                                            >  1:3168825/1‑100 (MQ=255)
                          ttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc                                                                          <  2:3815537/100‑1 (MQ=255)
                          tcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  1:3074608‑M1/73‑100 (MQ=255)
                          tcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  1:2200042‑M1/73‑100 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         <  2:3000590/100‑1 (MQ=255)
                           cgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:3228069‑M1/72‑100 (MQ=255)
                            gtatccgacaataagtgccggatgctgtgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCg                                                                        >  1:1815510‑M1/71‑100 (MQ=255)
                            gcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCg                                                                        >  1:1025110‑M1/71‑100 (MQ=255)
                             catccgacaataagtgccggatgctgcgaaaatgctttttctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  1:445379‑M1/70‑98 (MQ=255)
                             aTTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGa                                                                       >  1:3498790/1‑100 (MQ=255)
                              ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      <  1:2283444/100‑1 (MQ=255)
                              atccgtcaataagtgccggatgctgcgaaaatgctttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATcc                                                                         >  2:2631123‑M1/69‑97 (MQ=255)
                               tccgacaataagtgccggatgctgtgaatatgccttatcttttttacatattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAc                                                                      >  1:1009688‑M1/68‑99 (MQ=255)
                               tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  2:2594678/100‑1 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    <  2:1368259/100‑1 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    <  2:1557077/100‑1 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTan                                                                  <  2:2909823/100‑2 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  2:3164135/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  >  1:1258227/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGATCGCATTCGGCACTTATTGTCTGATGCGCTGCTTGCGCATCTTATCAGACCTa                                                                   >  1:1920681/1‑99 (MQ=37)
                                   ttCAATAAAACCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  2:1507997/100‑1 (MQ=255)
                                     cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                               >  1:3704266/1‑100 (MQ=255)
                                     cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                               <  2:2430045/100‑1 (MQ=255)
                                     aataagtgcgggatgctgcgaaaatgttttatttggcctacagattagatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 >  1:703027‑M1/62‑98 (MQ=255)
                                       aTAAATACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             <  2:1740346/100‑1 (MQ=255)
                                       aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                             <  1:3549818/100‑1 (MQ=255)
                                         aaaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGc                                                           >  2:2339944/1‑100 (MQ=255)
                                             aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                       <  1:2578858/100‑1 (MQ=255)
                                               cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     <  1:427766/100‑1 (MQ=255)
                                                gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     >  2:1779207/1‑99 (MQ=255)
                                                  cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                  >  1:549462/1‑100 (MQ=255)
                                                   aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCCGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTg                                                 >  1:1997485/1‑100 (MQ=255)
                                                     tcttAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                               <  1:1740804/97‑1 (MQ=255)
                                                       gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                              >  1:1501102/1‑99 (MQ=255)
                                                       gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGg                                             <  2:2708264‑M1/100‑2 (MQ=255)
                                                        tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATTGAATCTGTAGgc                                            >  2:372646‑M1/1‑98 (MQ=255)
                                                        tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgc                                            >  2:3632269‑M1/1‑98 (MQ=255)
                                                         aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACTAATCGCATCGAATCTGTAGgcc                                           <  2:880846‑M1/100‑4 (MQ=255)
                                                         aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgcc                                           <  1:905637‑M1/100‑4 (MQ=255)
                                                         aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgc                                            >  1:2083496‑M1/1‑97 (MQ=255)
                                                           aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                         <  2:928953/100‑1 (MQ=255)
                                                            aaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGa                                        <  2:3428014/100‑1 (MQ=255)
                                                              tcgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATa                                      <  2:784368/99‑1 (MQ=255)
                                                               cgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATaa                                     >  1:1582042/1‑100 (MQ=255)
                                                               cgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATaa                                     >  1:985260/1‑100 (MQ=255)
                                                                  cATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGc                                  <  2:3610282/100‑1 (MQ=255)
                                                                          tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  1:3047904/100‑1 (MQ=255)
                                                                          tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCATATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  2:2784182/100‑1 (MQ=255)
                                                                            tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        <  1:525760/100‑1 (MQ=255)
                                                                             aGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                        >  1:2692128/1‑99 (MQ=255)
                                                                              ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                      >  1:1783121/1‑100 (MQ=255)
                                                                              ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                      >  1:3004776/1‑100 (MQ=255)
                                                                              ggTCGCATTCGGCACTTATTGTAGGATGCGATGCTTGCGGATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          >  2:1982417/1‑96 (MQ=255)
                                                                                cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                   <  1:775191‑M1/98‑28 (MQ=255)
                                                                                cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                   <  1:2184263‑M1/98‑28 (MQ=255)
                                                                                cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                   <  1:3446756‑M1/98‑28 (MQ=255)
                                                                                 agcATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccg                  <  2:66399‑M1/99‑29 (MQ=255)
                                                                                 agcATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                   <  1:583598‑M1/98‑28 (MQ=255)
                                                                                 agcATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                   <  2:1279299‑M1/98‑28 (MQ=255)
                                                                                  gCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCg                  >  2:1962026/1‑100 (MQ=255)
                                                                                   cATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccgga                <  2:3498751‑M1/100‑31 (MQ=255)
                                                                                    aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCAAGATAAGGCATTTTCGCAGCATCCGGc                >  1:3652804/1‑100 (MQ=255)
                                                                                     ttCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCa               >  2:284534/1‑100 (MQ=255)
                                                                                     ttCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCa               >  2:1066777/1‑100 (MQ=255)
                                                                                      tCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCAc              <  2:1582027/100‑1 (MQ=255)
                                                                                      tCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCAc              <  2:2134876/100‑1 (MQ=255)
                                                                                        ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTCGCCCAGATAAGGCATTTTCGCCGCTTCAGCCACt             >  2:3311156/1‑99 (MQ=17)
                                                                                        ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACtt            <  1:496544/100‑1 (MQ=255)
                                                                                          cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgacaataag          <  1:2869680/100‑9 (MQ=255)
                                                                                          cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAt          >  2:428324/1‑100 (MQ=255)
                                                                                             ttATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGt       <  1:2734925/100‑1 (MQ=255)
                                                                                              tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  1:2622011/100‑1 (MQ=255)
                                                                                              tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttcga     <  1:650030‑M1/100‑42 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  1:3048535‑M1/100‑1 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  2:1189060‑M1/100‑1 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCCCAGCATCCGGcacttattcacgga   <  2:1703746‑M1/99‑7 (MQ=255)
                                                                                                  |                                                                                                   
AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.