New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)14 (0.110) 6/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 182 total aligned reads displayed.

TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAA  >  NC_000913/805737‑805935
                                                                                                   |                                                                                                   
 aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                                                    <  2:1368259/100‑1 (MQ=255)
   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTan                                                                                                  <  2:2909823/100‑2 (MQ=255)
   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                                                  >  1:2704012/1‑100 (MQ=255)
   cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGATCGCATTCGGCACTTATTGTCTGATGCGCTGCTTGCGCATCTTATCAGACCTa                                                                                                   >  1:1920681/1‑99 (MQ=37)
    ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                 <  2:2841345/100‑1 (MQ=255)
      cAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGaa                                                                                               >  1:3704266/1‑100 (MQ=255)
      aataagtgcgggatgctgcgaaaatgttttatttggcctacagattagatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                                                 >  1:703027‑M1/62‑98 (MQ=255)
        aTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATc                                                                                             <  1:3549818/100‑1 (MQ=255)
         tAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCg                                                                                            <  2:760534/100‑1 (MQ=255)
          aaaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGc                                                                                           >  2:2339944/1‑100 (MQ=255)
              aCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                                                       <  1:2578858/100‑1 (MQ=255)
                cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                                                     <  1:427766/100‑1 (MQ=255)
                    aGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCCGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTg                                                                                 >  1:1997485/1‑100 (MQ=255)
                       tGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                                                              >  1:342911/1‑100 (MQ=255)
                        gTAAAAAGCGCCATGTGAATGTAGTTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGg                                                                             <  2:843304‑M1/100‑2 (MQ=255)
                        gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                                                              >  1:1501102/1‑99 (MQ=255)
                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATTGAATCTGTAGgc                                                                            >  2:372646‑M1/1‑98 (MQ=255)
                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTaaga                                                                            >  2:1740789/1‑97 (MQ=255)
                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgc                                                                            >  2:1552995‑M1/1‑98 (MQ=255)
                         tAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgc                                                                            >  2:3632269‑M1/1‑98 (MQ=255)
                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACTAATCGCATCGAATCTGTAGgcc                                                                           <  2:880846‑M1/100‑4 (MQ=255)
                          aaaaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGgcc                                                                           <  1:905637‑M1/100‑4 (MQ=255)
                            aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                                                         <  2:928953/100‑1 (MQ=255)
                                cgcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATaa                                                                     >  1:985260/1‑100 (MQ=255)
                                 gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                                                    >  2:2869654/1‑100 (MQ=255)
                                    aTGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCa                                                                 <  1:598105/100‑1 (MQ=255)
                                     tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                                                >  1:2170552/1‑100 (MQ=255)
                                      gtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAtt                                                               <  2:548895/100‑1 (MQ=255)
                                       tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                                                              >  2:304753/1‑100 (MQ=255)
                                       tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCAAATCTGTAGGCGAGATAAGGCAttt                                                              >  1:2408788/1‑100 (MQ=255)
                                          aTGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAAGCCAGATAAGGCATTTTCg                                                           >  1:1524816/1‑100 (MQ=255)
                                           tGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCATATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                                                          <  2:2784182/100‑1 (MQ=255)
                                             tAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcag                                                        <  1:525760/100‑1 (MQ=255)
                                              aGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagc                                                       >  2:1559814/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgcagca                                                      >  1:3004736/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATAGAATCTGTAGGCAAGATAAGGCATTTTCgcagca                                                      >  1:321416/1‑100 (MQ=255)
                                               ggTCGCATTCGGCACTTATTGTAGGATGCGATGCTTGCGGATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                                                          >  2:1982417/1‑96 (MQ=255)
                                                 cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                                                   <  1:3446756‑M1/98‑28 (MQ=255)
                                                 cagcaTCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                                                   <  1:775191‑M1/98‑28 (MQ=255)
                                                  agcATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatcc                                                   <  2:1279299‑M1/98‑28 (MQ=255)
                                                    catccggcaCTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                <  1:1779222‑M1/96‑31 (MQ=255)
                                                    cATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggc                                                <  2:2666343‑M1/100‑31 (MQ=255)
                                                    cATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccgga                                                <  2:3498751‑M1/100‑31 (MQ=255)
                                                     aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCAAGATAAGGCATTTTCGCAGCATCCGGc                                                >  1:3652804/1‑100 (MQ=255)
                                                      tccggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccgg                                                 <  1:575333‑M1/95‑30 (MQ=255)
                                                         ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTCGCCCAGATAAGGCATTTTCGCCGCTTCAGCCACt                                             >  2:3311156/1‑99 (MQ=17)
                                                         ggCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACtt                                            <  1:496544/100‑1 (MQ=255)
                                                           cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgacaataag                                          <  1:2869680/100‑9 (MQ=255)
                                                           cACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTAt                                          >  2:428324/1‑100 (MQ=255)
                                                              ttATTGTCGGATGCGATGCTTGCGTATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttcg                                      <  1:1245986‑M1/100‑41 (MQ=255)
                                                              ttATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGt                                       <  1:2734925/100‑1 (MQ=255)
                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGTCCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc                                      <  1:428330/100‑1 (MQ=255)
                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttcga                                     <  2:3399698‑M1/100‑42 (MQ=255)
                                                               tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAATCGCATCGAACCGTAGgccggatgcggcgtaaacgccttatccggcctacggttcga                                     <  1:650030‑M1/100‑42 (MQ=255)
                                                                 aggtcggataagatgcgcaatcatcgtatccgacCTACGAATCGCATCGAATCTGTATGCCAGATAAGGCTTTTTCGCAGCATCCGGCACTTATTTTCgg                                    >  2:174024‑M2/35‑100 (MQ=255)
                                                                  tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGga                                   <  1:1336381/100‑1 (MQ=255)
                                                                   gtcggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                  >  1:1979251‑M2/33‑100 (MQ=255)
                                                                   gtcggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATATGTAAAAAAGATAAGGCATATTCACAGCATCCGGCACTTATTGTCGga                                   >  1:1009688‑M2/33‑99 (MQ=255)
                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                  <  2:1189060‑M1/100‑1 (MQ=255)
                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                  <  1:3048535‑M1/100‑1 (MQ=255)
                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat                                  <  2:2013467‑M1/100‑1 (MQ=255)
                                                                   GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCCCAGCATCCGGcacttattcacgga                                   <  2:1703746‑M1/99‑7 (MQ=255)
                                                                     cggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                                >  1:1025110‑M2/31‑100 (MQ=255)
                                                                     cggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCACAGCATCCGGCACTTATTGTcggatac                                >  1:1815510‑M2/31‑98 (MQ=255)
                                                                     CGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                                <  2:3609409‑M1/100‑1 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                               >  2:3228069‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAAGCATTTTCGCAGCATCCGGCACTTATTGACGgat                                  >  2:2631123‑M2/30‑97 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatccgacCTACGAATAGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcg                               >  2:2095676‑M2/30‑100 (MQ=255)
                                                                      ggataagatgcgcaagcatcgcatcagacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCCGACCTTATTGTCGgatgc                                >  2:3404204‑M2/30‑99 (MQ=255)
                                                                      GGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGACCAAATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgc                                <  1:1171262‑M1/99‑1 (MQ=255)
                                                                       gataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                              >  1:2200042‑M2/29‑100 (MQ=255)
                                                                       gataagatgcgcaagcatcgcatccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                              >  1:3074608‑M2/29‑100 (MQ=255)
                                                                       GATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcga                              <  2:1479706‑M1/100‑1 (MQ=255)
                                                                         TGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgatg                            <  1:3365454‑M1/100‑1 (MQ=255)
                                                                          gcgatgcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgatgcgatgc                           >  2:3720798/1‑100 (MQ=255)
                                                                              tgcTTGCGCATCTTATCCGACCTACGAAGCGCGTCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCt                          <  2:477559/97‑1 (MQ=255)
                                                                               gcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTgcg                      <  1:2355187/100‑1 (MQ=255)
                                                                               gcTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTgcg                      >  1:1701938/1‑100 (MQ=255)
                                                                                cTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATCCttctgc                     >  2:2953208/1‑96 (MQ=255)
                                                                                 ttGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCa                    >  2:3120873/1‑100 (MQ=255)
                                                                                  tGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCAt                   >  2:1031656/1‑100 (MQ=255)
                                                                                  tGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTATCGGATGCGATGCTTGCGCAt                   >  1:3068975/1‑100 (MQ=255)
                                                                                      cATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTa               <  1:3120903/100‑1 (MQ=255)
                                                                                        tCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATc             <  1:975686/100‑1 (MQ=255)
                                                                                         cTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc            <  2:3168795/100‑1 (MQ=255)
                                                                                         cTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc            >  1:2828938/1‑100 (MQ=255)
                                                                                          ttATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCg           <  2:24383/100‑1 (MQ=255)
                                                                                          ttATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCg           >  2:1486497/1‑100 (MQ=255)
                                                                                          ttATCCGACCTACAAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATcc            >  1:2634930/1‑99 (MQ=255)
                                                                                           tATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGa          >  1:62523/1‑100 (MQ=255)
                                                                                            ctccgacCTACGAATCGCATCGAATGTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGa          <  2:3326250‑M2/92‑1 (MQ=255)
                                                                                            atccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAc         >  2:563‑M2/8‑100 (MQ=255)
                                                                                             tccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc        <  1:304759‑M2/94‑1 (MQ=255)
                                                                                             tccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc        >  1:1966150‑M2/7‑100 (MQ=255)
                                                                                             tcagtcCTACGAATCGCATCGAATCTGTAGGCCGGAGAAGGCATTTTCGCCGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc        <  2:194625‑M2/94‑1 (MQ=255)
                                                                                              ccgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt       >  2:1753120‑M2/6‑100 (MQ=255)
                                                                                               cgacCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa      >  2:3629084‑M2/5‑100 (MQ=255)
                                                                                               cgacCTACGAATCGCATCGAATCTATAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATCGTCGGCTGCGATGCTTGCGCATCTTATCCGACCTa      >  2:3429347‑M2/5‑100 (MQ=255)
                                                                                                  cCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACaa   >  1:3478894‑M2/2‑100 (MQ=255)
                                                                                                  cCTACGAATCGCAGCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc        <  2:1796569‑M2/94‑1 (MQ=255)
                                                                                                   |                                                                                                   
TAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACAAA  >  NC_000913/805737‑805935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.