| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1190580 = | NA (NA) | 17 (0.130) | 10/166 | NT | NA | noncoding (1/23 nt) | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 1190603 = | NA (NA) | intergenic (‑156/+13) | phoP/purB | response regulator in two‑component regulatory system with PhoQ/adenylosuccinate lyase | |||||
Only 100 of 142 total aligned reads displayed.
TGTAACGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTC > NC_000913/1190481‑1190679 | nagaagaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtg < 1:3453093‑M1/1‑1 (MQ=255)cagaagaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtg < 1:1313354‑M1/1‑1 (MQ=255) gtAACGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAAGAAAAGTGAAAAAAAAAAAAGCGGAAAATCTTAATAAGCAGGc > 1:2341259/1‑100 (MQ=255) agaagaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGc > 2:3596306‑M1/99‑100 (MQ=255) tAACGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGc < 1:2599311/99‑1 (MQ=255) gaagaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGcc < 1:312237‑M1/3‑1 (MQ=255) catgaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGcc > 1:2175994‑M1/98‑100 (MQ=255) aagaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCg > 2:2038846‑M1/97‑100 (MQ=255) aaCGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAAATAAAGTAAAAAAATAAAAAACGAATAATCTTAATAAGCAGACCg > 1:685403/1‑100 (MQ=255) agaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCgg < 2:1551462‑M1/5‑1 (MQ=255) agaagagaaagcccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCgg < 2:2138381‑M1/5‑1 (MQ=255) aCGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCgg < 2:3106245/100‑1 (MQ=255) gcgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGAc < 2:2211371/100‑1 (MQ=255) gcgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGAc < 1:2148711/100‑1 (MQ=255) aagagaaagcccgcctgaaagcgatgacgccgtctaactatatttgtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGcc < 1:1977504‑M1/3‑1 (MQ=255) cgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACa > 2:1062847/1‑100 (MQ=255) cgATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACa < 1:3217030/100‑1 (MQ=255) gATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAg < 1:1433401/100‑1 (MQ=255) ttATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCa < 2:181528/100‑1 (MQ=255) aTGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCAt > 1:3630204/1‑99 (MQ=255) gtgttgaTGGGGGTAAACGTTAAATAAAGCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGc < 2:1631832/94‑1 (MQ=255) gtgGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCg > 1:1122398/1‑99 (MQ=255) gtgGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGc > 1:2784821/1‑100 (MQ=255) cccgcctgaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGcc < 1:1875489‑M1/16‑1 (MQ=255) gggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGc > 1:3426945/1‑100 (MQ=255) gggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGc > 2:1547640/1‑100 (MQ=255) gaaagcgatgacgccggctaactatatttgtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGc > 2:3496592‑M1/78‑100 (MQ=255) gaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGc > 2:1426668‑M1/78‑100 (MQ=255) gaaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGc > 1:2045600‑M1/78‑100 (MQ=255) ggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCa > 2:1977486/1‑100 (MQ=255) aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 2:1837913‑M1/77‑100 (MQ=255) aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 1:580777‑M1/77‑100 (MQ=255) aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 1:3907477‑M1/77‑100 (MQ=255) gggTAAACATTAAATAAATCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc < 1:939164/100‑1 (MQ=255) aagcgatgacgccggctaactatattggtcgagttatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCAc > 1:194075‑M1/76‑100 (MQ=255) ggTAAACATTAAATAAACCAGCGGGGAGGGGCGGTAAAGTGAAAAAATAAAAAACGAATAATCTTAATAAAAAAGCAAGAAAGCATCGCCATCAGGAACt > 1:2997862/1‑100 (MQ=255) agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt > 1:758449‑M1/75‑100 (MQ=255) agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt > 2:779290‑M1/75‑100 (MQ=255) agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt > 2:779604‑M1/75‑100 (MQ=255) gcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTg > 1:3444849‑M1/74‑100 (MQ=255) gatgacgccggctaactatattgggcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGAt > 2:1875474‑M1/72‑100 (MQ=255) aaaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGa < 1:1686263/99‑1 (MQ=255) aaaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGAt > 2:2731336/1‑100 (MQ=255) aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa > 2:3057535/1‑100 (MQ=255) aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa > 2:1163642/1‑100 (MQ=255) aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa > 2:1155798/1‑100 (MQ=255) aCATTAAATAAACCAGCGGTGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATAc < 1:729100/100‑1 (MQ=255) cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg < 1:1062858/100‑1 (MQ=255) cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg > 2:1884687/1‑100 (MQ=255) aTTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGa > 1:352229/1‑100 (MQ=255) ttAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAg < 2:2676773/100‑1 (MQ=255) cgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGATACGAg > 1:1034317‑M1/67‑100 (MQ=255) acgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagGCCGGACAGCATCGCCATCCGGCACTGATACGAg > 1:1282951‑M1/67‑100 (MQ=255) taaataaaCCATCGGGGAGGGGAGGTAAAGTGAAAAAATAAAATGCGTATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg < 2:580059/100‑1 (MQ=255) aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg > 2:3151441/1‑99 (MQ=255) aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGt > 1:2316528/1‑100 (MQ=255) aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGACCGGACAGCATCGCCATCCGGCACTGATACGAgg > 1:2320009/1‑99 (MQ=255) taaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTa < 1:3016152/100‑1 (MQ=255) aCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAtt > 1:2526442/1‑99 (MQ=255) ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc < 2:1327359/100‑1 (MQ=255) cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa < 1:97607/100‑1 (MQ=255) gCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGc < 1:1542441/100‑1 (MQ=255) ggggaggggaGGTAAAGTGAAAAAATAAAAAGCGGAAAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtc > 1:2755609/1‑100 (MQ=255) gtgagcggaggTAAATTGAAAACATAAAAAGCGGATAATCTTTATAAGCATGTCGGACTGCTTCGTCTTCCGTTTTTGATACGAGGTTTATTTc < 2:1786337/92‑1 (MQ=255) gggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAAc < 1:1285957/100‑1 (MQ=255) tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACAAGGTTTATTTCAGCTCATCAACCATCGt < 2:1077398/100‑1 (MQ=255) tcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg > 1:557136‑M1/40‑100 (MQ=255) aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAATCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg < 1:262363/100‑1 (MQ=255) aGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGAt < 1:2557500/100‑1 (MQ=255) gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa > 1:1774313/1‑100 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg < 1:310610/100‑1 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg < 2:3332496/100‑1 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg > 1:2976711/1‑100 (MQ=255) gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACAAAGTTTATTTCAGCTCATCAACCATCGTGATAGc > 1:241256/1‑100 (MQ=255) aaaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCt < 2:3657475/100‑1 (MQ=255) aTAAAAAGCGGATAATTTTAATAAGCATGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAc < 2:2783913/99‑1 (MQ=255) tAAAAAGCGGATAATTTTAATAAGCATGCCGAACAGCATCGCCATCCTGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc < 2:3334416/99‑1 (MQ=255) aaaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGATTTATTTCAGCTAATCAAACATCGTGATAGATCGACCaa > 1:317445/1‑100 (MQ=255) aaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAat < 1:3352987/100‑1 (MQ=255) aaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGATAAACAAAAATAGTGATAgat > 1:2680434/1‑89 (MQ=255) aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata > 1:2235167/1‑100 (MQ=255) gCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAg < 2:2212937/100‑1 (MQ=255) gCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAg < 2:1520473/100‑1 (MQ=255) ggATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGtt < 1:3917938/100‑1 (MQ=255) gATAATCTTAATAAGCAGGCCGGTCAGCATCGCCAGCCGGCACTGATAGGAGGTTTATTTCAGCTTATCAACCTTCGTGATAGCTCGACCAATATAGTTa < 2:160945/100‑1 (MQ=255) aaTCTTAATAAGCAGGCCGGACAGCATCGCAATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGcc < 2:105620/100‑1 (MQ=255) cTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGc < 2:254457/100‑1 (MQ=255) ttAATAAGCAGGCCGGACAGCATCGCCCTACGGCACTGATCCGAGGTTTATCTCAGCTCACCCACCATCGTCATCGCTCGACCAAtctaatca > 2:3393113/1‑89 (MQ=255) ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg < 2:3140219/100‑1 (MQ=255) ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg > 1:3779504/1‑100 (MQ=255) taatacGCAGGCCTGATAGCATCGACATCTGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCTTGATAGCTCTACCTATATAGTTAGTCGGc < 2:253963/98‑1 (MQ=255) taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt > 1:1662742/1‑100 (MQ=255) ataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGTGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCa < 1:2084933/100‑1 (MQ=255) aaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATc < 1:3380538/100‑1 (MQ=255) gCAGTCCGGACAGCATCTCCATCCGGCACTTATACGAGTTTTATTTCAGCTCATCAACCTTCTTGATAGCTCTACCAATATAGTTAGCCGGCGTCATCGc < 2:2324746/100‑1 (MQ=255) aGGCCGGACAGCATCGCCATCCGGCACTGCTACGAGGTTTATTTCAGCTCATCAACCATCGTGATCGCTCGACCAATATAGTTAGCCCGCGTCATCGCtt > 2:3518617/1‑100 (MQ=255) ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt > 2:2320160/1‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGTACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 1:1909245‑M1/1‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 2:3036066‑M1/1‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 2:529257‑M1/1‑100 (MQ=255) | TGTAACGCGATTATGTGGTTATGGGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTC > NC_000913/1190481‑1190679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |