| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1190580 = | NA (NA) | 17 (0.130) | 10/166 | NT | NA | noncoding (1/23 nt) | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP106 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 1190603 = | NA (NA) | intergenic (‑156/+13) | phoP/purB | response regulator in two‑component regulatory system with PhoQ/adenylosuccinate lyase | |||||
Only 100 of 153 total aligned reads displayed.
GGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTGG > NC_000913/1190504‑1190702 | ggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCa > 2:1977486/1‑100 (MQ=255)ggggTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCa < 2:1598420/100‑1 (MQ=255)aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 2:1837913‑M1/77‑100 (MQ=255)aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 1:580777‑M1/77‑100 (MQ=255)aaagcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCa > 1:3907477‑M1/77‑100 (MQ=255) gggTAAACATTAAATAAATCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCAc < 1:939164/100‑1 (MQ=255) aagcgatgacgccggctaactatattggtcgagttatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCAc > 1:194075‑M1/76‑100 (MQ=255) ggTAAACATTAAATAAACCAGCGGGGAGGGGCGGTAAAGTGAAAAAATAAAAAACGAATAATCTTAATAAAAAAGCAAGAAAGCATCGCCATCAGGAACt > 1:2997862/1‑100 (MQ=255) agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt > 1:758449‑M1/75‑100 (MQ=255) agcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACt > 2:779290‑M1/75‑100 (MQ=255) gcgatgacgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTg > 1:3444849‑M1/74‑100 (MQ=255) gatgacgccggctaactatattgggcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGAt > 2:1875474‑M1/72‑100 (MQ=255) aaaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGa < 1:1686263/99‑1 (MQ=255) aaaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGAt > 2:2731336/1‑100 (MQ=255) aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa > 2:1163642/1‑100 (MQ=255) aaCATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATa > 2:3057535/1‑100 (MQ=255) cATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACg > 2:1884687/1‑100 (MQ=255) aTTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGa > 1:352229/1‑100 (MQ=255) ttAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAg < 1:2451785/100‑1 (MQ=255) cgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGATACGAg > 1:1034317‑M1/67‑100 (MQ=255) acgccggctaactatattggtcgagctatcacgatggttgatgagctgaaataaacctcgtatcagGCCGGACAGCATCGCCATCCGGCACTGATACGAg > 1:1282951‑M1/67‑100 (MQ=255) taaataaaCCATCGGGGAGGGGAGGTAAAGTGAAAAAATAAAATGCGTATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAgg < 2:580059/100‑1 (MQ=255) aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGt > 1:2316528/1‑100 (MQ=255) aaataaaCCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGACCGGACAGCATCGCCATCCGGCACTGATACGAgg > 1:2320009/1‑99 (MQ=255) ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTAttt > 2:165787/1‑99 (MQ=255) ccAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc > 2:1313340/1‑100 (MQ=255) cAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCa < 1:97607/100‑1 (MQ=255) gtggggatgggaGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTc < 1:1303923/95‑1 (MQ=255) cGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCt < 1:642690/100‑1 (MQ=255) ggggaggggaGGTAAAGTGAAAAAATAAAAAGCGGAAAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtc > 1:2755609/1‑100 (MQ=255) aggggaggTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGACGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCtcatca > 1:1186539/1‑100 (MQ=255) tAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACAAGGTTTATTTCAGCTCATCAACCATCGt < 2:1077398/100‑1 (MQ=255) tcacgatggttgatgagctgaaataaacctcgtatcagtGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg > 1:557136‑M1/40‑100 (MQ=255) aaaGTGAAAAAATAAAAAGCGGATAATCTTAATAATCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTg < 1:262363/100‑1 (MQ=255) aaGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCTGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGa < 2:336593/100‑1 (MQ=255) aGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGAt < 1:2557500/100‑1 (MQ=255) gTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATa > 1:1774313/1‑100 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg < 1:310610/100‑1 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg > 1:2976711/1‑100 (MQ=255) tGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAg < 2:3332496/100‑1 (MQ=255) gAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACAAAGTTTATTTCAGCTCATCAACCATCGTGATAGc > 1:241256/1‑100 (MQ=255) aaaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCt < 2:3657475/100‑1 (MQ=255) aaaaaTAAAAAGCGGATAATCTTAATAAGCAGGCCGGTCAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTc > 2:1155245/1‑100 (MQ=255) tAAAAAGCGGATAATTTTAATAAGCATGCCGAACAGCATCGCCATCCTGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGAcc < 2:3334416/99‑1 (MQ=255) aaaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGATTTATTTCAGCTAATCAAACATCGTGATAGATCGACCaa > 1:317445/1‑100 (MQ=255) aaaaGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAat < 1:3352987/100‑1 (MQ=255) aGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAAtata > 1:2235167/1‑100 (MQ=255) gCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAg < 2:2212937/100‑1 (MQ=255) ggATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGtt < 2:2863392/100‑1 (MQ=255) aTCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCg > 1:505659/1‑100 (MQ=255) cTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGc < 2:254457/100‑1 (MQ=255) ttAATAAGCAGGCCGGACAGCATCGCCCTACGGCACTGATCCGAGGTTTATCTCAGCTCACCCACCATCGTCATCGCTCGACCAAtctaatca > 2:3393113/1‑89 (MQ=255) ttAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg > 1:3779504/1‑100 (MQ=255) ctcgtatcagtgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCg > 1:1034317‑M2/35‑100 (MQ=255) ctcgtatcagtgccggatggcgatgctgtccggc‑CTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt > 1:1282951‑M2/35‑100 (MQ=255) taatacGCAGGCCTGATAGCATCGACATCTGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCTTGATAGCTCTACCTATATAGTTAGTCGGc < 2:253963/98‑1 (MQ=255) taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt > 1:1662742/1‑100 (MQ=255) taataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGt < 1:273695/100‑1 (MQ=255) ataaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGTGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCa < 1:2084933/100‑1 (MQ=255) taaGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCAt > 2:3515014/1‑100 (MQ=255) aGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCg > 1:3030194/1‑100 (MQ=255) gCAGTCCGGACAGCATCTCCATCCGGCACTTATACGAGTTTTATTTCAGCTCATCAACCTTCTTGATAGCTCTACCAATATAGTTAGCCGGCGTCATCGc < 2:2324746/100‑1 (MQ=255) agtgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCt > 2:779604‑M2/27‑100 (MQ=255) agtgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCt > 2:779290‑M2/27‑100 (MQ=255) aGGCCGGACAGCATCGCCATCCGGCACTGCTACGAGGTTTATTTCAGCTCATCAACCATCGTGATCGCTCGACCAATATAGTTAGCCCGCGTCATCGCtt > 2:3518617/1‑100 (MQ=255) tgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt > 2:1837913‑M2/25‑100 (MQ=255) tgccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt > 1:3907477‑M2/25‑100 (MQ=255) ggCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCttt > 2:2320160/1‑100 (MQ=255) gccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 1:2045600‑M2/24‑100 (MQ=255) gccggatggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 2:1426668‑M2/24‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGTACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 1:1909245‑M1/1‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 2:3036066‑M1/1‑100 (MQ=255) GCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTc > 2:529257‑M1/1‑100 (MQ=255) CCGGACAGCATCCCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa < 1:2581365‑M1/100‑1 (MQ=255) CGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAg > 1:3390119‑M1/1‑100 (MQ=255) GGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCa < 2:3857512‑M1/98‑1 (MQ=255) cAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCgg > 2:3801383/1‑100 (MQ=255) ggcgatgctgtccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCggg < 1:1875489‑M2/84‑1 (MQ=255) agtaTCGCTATCCGTCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGTGTCATCGCTTTCAGGCgg < 2:2868423/96‑1 (MQ=255) aGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCgg < 2:3146019/99‑1 (MQ=255) gCATTGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATATTTAGCCGGCGTCATCGCTTTCAggg < 2:2683020/96‑2 (MQ=255) gCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGc > 2:3660989/1‑100 (MQ=255) aTCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCtt > 1:3682210/1‑100 (MQ=255) cGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACTATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtc < 1:1070608/100‑1 (MQ=255) cGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtc < 2:1662727/100‑1 (MQ=255) gCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTTATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtct < 1:758259/100‑1 (MQ=255) ccATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTtctc > 1:2020216/1‑100 (MQ=255) cATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctct < 1:1990076/100‑1 (MQ=255) cATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctct < 1:267195/100‑1 (MQ=255) aTCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtctt > 2:1963377/1‑100 (MQ=255) aTCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtctt < 1:560644/100‑1 (MQ=255) ccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttct < 2:1483325‑M2/95‑1 (MQ=255) ccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttct < 2:1551462‑M2/95‑1 (MQ=255) ccggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttct < 2:2138381‑M2/95‑1 (MQ=255) cggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttctt > 2:2038846‑M2/5‑100 (MQ=255) ggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTttctcttcatg > 1:2175994‑M2/4‑97 (MQ=255) ggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCtcttcttc < 1:312237‑M2/97‑1 (MQ=255) ggcACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACAAATATAGTTAGACGGCGTCATCGCTTTCAGGCGGGCTTTCtctt < 1:1977504‑M2/93‑1 (MQ=255) cACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTctcttcttctn < 1:3453093‑M2/99‑2 (MQ=255) cACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTg < 1:1313354‑M2/99‑1 (MQ=255) | GGGGTAAACATTAAATAAACCAGCGGGGAGGGGAGGTAAAGTGAAAAAATAAAAAGCGGATAATCTTAATAAGCAGGCCGGACAGCATCGCCATCCGGCACTGATACGAGGTTTATTTCAGCTCATCAACCATCGTGATAGCTCGACCAATATAGTTAGCCGGCGTCATCGCTTTCAGGCGGGCTTTCTCTTCTTCTGG > NC_000913/1190504‑1190702 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |