New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2133432 =NA (NA)16 (0.120) 7/164 NT NA noncoding (1/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2133462 = NA (NA)noncoding (31/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 184 total aligned reads displayed.

GAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATA  >  NC_000913/2133334‑2133531
                                                                                                  |                                                                                                   
 ttccgccgctccagcgcgtgtcaggattttggctattacgaataccaatataagtcggatgcgtaatggcgacgcctgcattcgcaccgccccgtagGcc                                                                                                   >  2:347021‑M1/98‑100 (MQ=255)
  tctgCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCg                                                                                                  <  2:127837/97‑1 (MQ=255)
  tccgccgcgccagcgcgtatcaggattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCg                                                                                                  >  2:1823382‑M1/97‑100 (MQ=255)
  aTCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCg                                                                                                  <  2:73405/100‑1 (MQ=255)
   tCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCgg                                                                                                 <  1:2127341/100‑1 (MQ=255)
   ccgccgcgccagcgcgtatcaggattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCgg                                                                                                 >  2:3403437‑M1/96‑100 (MQ=255)
   ccgccgcgccagcgcgtatcaggattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCgg                                                                                                 >  1:1636710‑M1/96‑100 (MQ=255)
    cgccgcgccagcgcgtatcaggattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGa                                                                                                <  1:533260‑M1/6‑1 (MQ=255)
     gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCATCGGATTGCTTTTCAAAGATTGTACTCCCGGCTTATAAGCTGGTTTGCTTGCCAGAt                                                                                               >  1:1612131/1‑100 (MQ=255)
     gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCgaga                                                                                               >  1:127841/1‑97 (MQ=255)
     gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGAt                                                                                               >  2:1747188/1‑100 (MQ=255)
     gCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGAt                                                                                               >  2:1997710/1‑100 (MQ=255)
      ccAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATg                                                                                              >  2:3666952/1‑100 (MQ=255)
      ccAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATg                                                                                              <  1:2903982/100‑1 (MQ=255)
        aGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgca                                                                                            >  2:881368/1‑99 (MQ=255)
          ttgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggc                                                                                          <  1:3144922/100‑1 (MQ=255)
           tgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggcg                                                                                         >  2:813690/1‑100 (MQ=255)
           tgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggcg                                                                                         >  1:1453718/1‑100 (MQ=255)
           tgttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATgcggcg                                                                                         <  1:1006366/100‑1 (MQ=255)
             ttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTg                                                                                       <  1:3757003/100‑1 (MQ=255)
             ttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTg                                                                                       >  1:2525879/1‑100 (MQ=255)
             ttgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGATTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTg                                                                                       >  1:1155705/1‑100 (MQ=255)
              tgGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGa                                                                                      >  2:2025894/1‑100 (MQ=255)
               ggCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGaa                                                                                     <  2:1836183/100‑1 (MQ=255)
               ggCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGaa                                                                                     >  1:3146701/1‑100 (MQ=255)
               ggCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATCCGGCGTGa                                                                                      >  2:338582/1‑99 (MQ=255)
                 cGGTTCCCGGTCGGCATACAGATGGAGATCAGCGGACTGTTTTGCATAGGTTGTTCTCCCGGCTTATCAGCTTGTCGGCTTGCCGGATGCGCCGTg                                                                                       >  2:2800602/1‑96 (MQ=255)
                   gTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGcc                                                                                 >  1:458913/1‑100 (MQ=255)
                   gTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGcc                                                                                 <  2:1567985/100‑1 (MQ=255)
                    ttCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCt                                                                                >  2:3840871/1‑100 (MQ=255)
                     tCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCACGGCTTATGAGCTGGTTTACTTGCCGGATGCGGCGTGAACGCCtt                                                                               >  1:762100/1‑100 (MQ=255)
                         ngTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATATTTTTTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  2:3861379/2‑100 (MQ=255)
                         ggTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  2:609997/1‑100 (MQ=255)
                         gattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:3092089‑M1/74‑100 (MQ=255)
                         gattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  2:3761206‑M1/74‑100 (MQ=255)
                         gattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  2:458393‑M1/74‑100 (MQ=255)
                         gattatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:1996920‑M1/74‑100 (MQ=255)
                          attatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATcc                                                                           >  1:1767089‑M1/73‑99 (MQ=255)
                           ttatggctattacgaatacgaatatatgtcggatgcgaaagaacgacgtctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGGCGTAGCCgg                                                                         >  2:2177145‑M1/72‑100 (MQ=255)
                           tCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  1:2562613/100‑1 (MQ=255)
                           gatctatatAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCgg                                                                         <  1:2450622/95‑1 (MQ=255)
                            tatggctattacgaatacgaatataagtcggatgcgaaataacgacgcttgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        >  1:394702‑M1/71‑100 (MQ=255)
                            tatggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                                        >  2:1165960‑M1/71‑100 (MQ=255)
                             ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       <  1:3666991/100‑1 (MQ=255)
                             ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGca                                                                       <  1:1091128/100‑2 (MQ=25)
                             ggCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGATTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       >  1:3534703/1‑100 (MQ=255)
                             atggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                       >  1:1928954‑M1/70‑100 (MQ=255)
                              gCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGTTTATGAGCTGGTTTGCTTGCCGGATAAGGCGTTCACGCCGCATCCGGca                                                                       <  2:2787376/99‑2 (MQ=25)
                                gctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                    >  2:3145679‑M1/67‑100 (MQ=255)
                                atatAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCggagatc                                                                    >  2:2450599/1‑95 (MQ=255)
                                 tataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGATGATATGATTAAAAAATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                   >  1:203351/1‑100 (MQ=25)
                                   taGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg                                                                 >  2:2917664/1‑100 (MQ=255)
                                     gATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGc                                                               <  1:3474695/100‑1 (MQ=255)
                                       ttGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCgg                                                             >  1:3003000/1‑100 (MQ=255)
                                       aagagaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCgg                                                             <  1:233808/98‑1 (MQ=255)
                                         gagaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTg                                                           >  2:3691813/1‑100 (MQ=255)
                                          agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCTGCTGCGGAGTGAACGACTTATACGACCAACgggg                                                                >  1:3673858/1‑94 (MQ=255)
                                           gaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCAGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCg                                                         >  2:287045/1‑100 (MQ=255)
                                              cAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAAt                                                      >  2:3923081/1‑100 (MQ=255)
                                              cAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAAt                                                      <  1:1997728/100‑1 (MQ=255)
                                               aGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATg                                                     >  2:1729741/1‑100 (MQ=255)
                                                 cGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCa                                                   >  1:419570/1‑100 (MQ=255)
                                                     ttGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcg                                               <  1:1192351/100‑1 (MQ=255)
                                                       gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtc                                             >  2:2804705/1‑100 (MQ=255)
                                                            tCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAt                                        >  1:796661/1‑100 (MQ=255)
                                                              aTAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAttt                                      <  2:1307741/100‑1 (MQ=255)
                                                               tAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTc                                     <  1:3303316/100‑1 (MQ=255)
                                                                aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                    >  2:3625307/1‑100 (MQ=255)
                                                                 ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                   >  1:1318891/1‑100 (MQ=255)
                                                                 ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                   >  2:1236319/1‑100 (MQ=255)
                                                                 ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTAGc                                   >  1:908221/1‑100 (MQ=255)
                                                                  gttgttCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCa                                  >  2:1083632/1‑100 (MQ=255)
                                                                        ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGACTTATCCGGCCTAAGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                            >  1:1216679/1‑100 (MQ=255)
                                                                         tcCCGGCCTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACt                           >  1:2055038/1‑100 (MQ=255)
                                                                           cctgcattcgcaccgccccgtagGCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                         <  1:1511712‑M1/77‑1 (MQ=255)
                                                                           ccGGCTTATGAGCTGGTTTGCTTGTCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                         <  1:966148/100‑1 (MQ=255)
                                                                           ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCTGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                         >  1:1007763/1‑100 (MQ=255)
                                                                             ggCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtata                       >  1:199205/1‑100 (MQ=255)
                                                                               cTTATGGGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCTTCGTTATTTCGCATCCGACTTAtatt                     <  2:3620719/100‑1 (MQ=255)
                                                                                 tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                   <  2:2228338/100‑1 (MQ=255)
                                                                                 tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                   <  2:1985792/100‑1 (MQ=255)
                                                                                 tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                   <  2:1216665/100‑1 (MQ=255)
                                                                                  aTGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGATGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgt                  >  1:499719/1‑100 (MQ=255)
                                                                                    gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCTACGGGGCGGGGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgta                 <  1:1694009/99‑1 (MQ=255)
                                                                                    gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                >  1:2794830/1‑100 (MQ=255)
                                                                                    gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                <  1:3400839/100‑1 (MQ=255)
                                                                                     aGCTGGTTTTCTTGCCGTATGCGGCGTGAACGCCTTATCCGGCTTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt               <  1:1304970/100‑1 (MQ=255)
                                                                                      gCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattc              >  2:2609599/1‑100 (MQ=255)
                                                                                       cttgttggcggGCCGGATGCTGCGTGAACGCCTTATCCGGCATACGGGGCTGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattcg             >  2:1362220‑M1/12‑100 (MQ=255)
                                                                                       cTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattcg             <  2:785970/100‑1 (MQ=255)
                                                                                         ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTGGCGGTGCGAATGCAGCCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta           >  2:2120130/1‑100 (MQ=255)
                                                                                         ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta           <  2:1453981/100‑1 (MQ=255)
                                                                                         ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta           >  2:2967021/1‑100 (MQ=255)
                                                                                           tttGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAAt         >  1:1069184/1‑100 (MQ=255)
                                                                                            ttgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATa        >  2:419899/1‑100 (MQ=255)
                                                                                            ttgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATa        <  2:165758/100‑1 (MQ=255)
                                                                                             tgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAg       <  1:679510/100‑1 (MQ=255)
                                                                                              gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc      >  2:3439518/1‑100 (MQ=255)
                                                                                               tttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCTGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc     <  2:2634020/99‑1 (MQ=255)
                                                                                               cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc     >  2:3103988/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
GAATCGCCAGTTGTTGGCGGTTCCAGGTCGGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATA  >  NC_000913/2133334‑2133531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.