New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2133432 =NA (NA)16 (0.120) 7/164 NT NA noncoding (1/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2133462 = NA (NA)noncoding (31/34 nt) REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences REP145 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 163 total aligned reads displayed.

GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGA  >  NC_000913/2133363‑2133560
                                                                                                   |                                                                                                  
atggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                                                    >  1:2935307‑M1/70‑100 (MQ=255)
atggctattacgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtagGCCGGATGCGGCGTGAACGCCTTATCCGGcc                                                                                                    >  1:1928954‑M1/70‑100 (MQ=255)
  cATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTa                                                                                                  >  2:3698419/1‑100 (MQ=255)
   atatAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                                                                 >  1:1320040/1‑100 (MQ=255)
    tataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGATGATATGATTAAAAAATGCGGCGTGAACGCCTTATCCGGCCTACg                                                                                                >  1:203351/1‑100 (MQ=25)
     ataGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgg                                                                                               <  1:2900457/100‑1 (MQ=255)
      taGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACggg                                                                                              >  2:2917664/1‑100 (MQ=255)
       aGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACgggg                                                                                             <  1:3639182/100‑1 (MQ=255)
        gATTGATATCATCGGATTGTTTTTCATAGGTTGTCCCCCCGACTTATGAGCTGGTGTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGc                                                                                            <  2:3538624/100‑1 (MQ=25)
        gATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGc                                                                                            <  1:3474695/100‑1 (MQ=255)
         aTTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTGTGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCg                                                                                           >  1:3183953/1‑100 (MQ=255)
          ttGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCgg                                                                                          >  1:3003000/1‑100 (MQ=255)
          ttGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCgg                                                                                          <  2:277295/100‑1 (MQ=255)
          cgaatacgaatataagtcggatgcgaaataacgacgcctgcattcgcacagccccgtatgccggataaggcgttcacgcagcatccggcccgccaacaag                                                                                          >  2:1362220‑M2/90‑90 (MQ=255)
            gagaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTg                                                                                        >  2:3691813/1‑100 (MQ=255)
             agaTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCTGCTGCGGAGTGAACGACTTATACGACCAACgggg                                                                                             >  1:3673858/1‑94 (MQ=255)
               aTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGa                                                                                     >  2:1045541/1‑100 (MQ=255)
               aTCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGa                                                                                     <  2:1736596/100‑1 (MQ=255)
                 cAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAAt                                                                                   <  1:1997728/100‑1 (MQ=255)
                 cAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAAt                                                                                   >  2:3923081/1‑100 (MQ=255)
                    cGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCa                                                                                >  1:419570/1‑100 (MQ=255)
                      taagtcggatgcgaaataacgacgcctgcattcgcaccgccccgtaggccggatgcggcgtgaacgccttatccggcCTACGGGGCGGTGCGAATGCAgg                                                                              <  1:1511712‑M2/23‑1 (MQ=255)
                       aTTTTTTTTCATAGGTTGTTCTCCCGGCTTATGACCTAGTTTGCTTGCCGGTTGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAg                                                                               <  2:1890191/98‑1 (MQ=37)
                       aTTGTTTTTCATAGGTTGTTCTCCCGACTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGc                                                                             >  1:2381703/1‑100 (MQ=255)
                        ttGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcg                                                                            <  1:1192351/100‑1 (MQ=255)
                          gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGcgtc                                                                          >  2:2804705/1‑100 (MQ=255)
                          gTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAAGGGGCGGTGCGAATGCAGGcgtc                                                                          >  1:1008597/1‑100 (MQ=255)
                              ttCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTa                                                                      <  2:3451589/100‑1 (MQ=255)
                               tCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTAt                                                                     >  1:796661/1‑100 (MQ=255)
                                  tAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTc                                                                  <  1:3303316/100‑1 (MQ=255)
                                   aGGTTTTTCTCCCGGCTTATGAGCTGGTTTACTTGCCGGATGCGGCGTGAAAGCATTATCCAGCCTACGGGGCGGTGCGAACGCAGGCGTCGTTAttttg                                                                 >  2:409386/1‑98 (MQ=37)
                                   aGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                                                 >  2:3625307/1‑100 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCg                                                                 <  2:789794/99‑1 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                >  2:1236319/1‑100 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGc                                                                >  1:1318891/1‑100 (MQ=255)
                                    ggTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTAGc                                                                >  1:908221/1‑100 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                         >  2:1286685/1‑100 (MQ=255)
                                           ctcCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGACTTATCCGGCCTAAGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGAc                                                         >  1:1216679/1‑100 (MQ=255)
                                            tcCCGGCCTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACt                                                        >  1:2055038/1‑100 (MQ=255)
                                              ccGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCTGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTta                                                      >  1:1007763/1‑100 (MQ=255)
                                                ggCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTtata                                                    >  1:199205/1‑100 (MQ=255)
                                                ggCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAACGGTGCGAATGCAGACGTCGTTATTTCGCATCCGACTtata                                                    >  1:38301/1‑100 (MQ=255)
                                                 gCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCAGACTTatat                                                   >  2:198807/1‑100 (MQ=255)
                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                                                <  2:3774677/100‑1 (MQ=255)
                                                    tATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcg                                                <  2:1216665/100‑1 (MQ=255)
                                                      tGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgta                                              <  1:1083643/100‑1 (MQ=255)
                                                       gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGTCTTATCCGGCCTACGGGGCGGGGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgta                                              <  1:1694009/99‑1 (MQ=255)
                                                       gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCTGGCTACGGGGCGTTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                                             <  2:1712018/100‑1 (MQ=255)
                                                       gAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtat                                             <  1:3400839/100‑1 (MQ=255)
                                                        aGCTGGTTTTCTTGCCGTATGCGGCGTGAACGCCTTATCCGGCTTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt                                            <  1:1304970/100‑1 (MQ=255)
                                                        aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt                                            >  2:2802147/1‑100 (MQ=255)
                                                        aGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtatt                                            <  2:3153954/100‑1 (MQ=255)
                                                         gCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTAtattcgtattc                                           >  2:2609599/1‑100 (MQ=255)
                                                            ggTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                        >  2:2967021/1‑100 (MQ=255)
                                                            cttccgatctCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATAttcgtattcgta                                        >  2:247976‑M1/11‑100 (MQ=255)
                                                              tttGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAAt                                      >  1:1069184/1‑100 (MQ=255)
                                                                tgcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAg                                    <  1:679510/100‑1 (MQ=255)
                                                                 gtaggccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                   >  2:3145679‑M2/35‑100 (MQ=255)
                                                                 gcttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                   <  2:132044/100‑1 (MQ=255)
                                                                 gctgGCCGGAGGCTGCGTGAACGCCTGATCCGGCCTACGGGGCGGTGCGGATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGc                                   <  2:1751763‑M1/96‑1 (MQ=255)
                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                  >  2:3103988/1‑100 (MQ=255)
                                                                  cttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                  <  2:203346/100‑1 (MQ=255)
                                                                  cttgcCGGACGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGcc                                  >  2:263164/1‑100 (MQ=255)
                                                                   ttgcCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCa                                 >  2:778897/1‑100 (MQ=255)
                                                                     gccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGAAGTCGTTATTTCGCATACAAATTATATTCGTATTCGTAATAGCCATa                               >  1:45390‑M2/31‑100 (MQ=255)
                                                                     gccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAAGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATa                               >  1:394702‑M2/31‑100 (MQ=255)
                                                                     gcCGGATGCGGGGTGAACGCCTTATACAGCCTACGGGGCGGTGCGAATGAATGCGTCGTTGTTTTGCATCCGAGTTATATTCGTATTAGTAATAGCCATa                               >  2:3407669/1‑100 (MQ=255)
                                                                     gcCGGATGCGGCGTTAACGCATTAAACGGCCTACGGGGCGCTGCGAATGAAGGCGTCGTTATTTCGCATACGACTTATATTATTATTCGTAATAGTCATa                               >  2:672749/1‑100 (MQ=25)
                                                                      ccggctacgccgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGACGTCGTTCTTTCGCATCCGACATATATTCGTATTCGTAATAGCCATaa                              >  2:2177145‑M2/30‑100 (MQ=255)
                                                                      ccggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATaa                              >  1:483610‑M2/30‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGTGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATaa                              >  1:2463752‑M1/1‑100 (MQ=255)
                                                                      CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTcgtattcgtaagatcggaag                              <  1:247981‑M1/100‑10 (MQ=255)
                                                                      CCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATaa                              <  1:2221894‑M1/100‑1 (MQ=255)
                                                                       cggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAAt                             >  1:1957047‑M2/29‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAAt                             >  1:1767089‑M2/28‑99 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                            >  2:458393‑M2/28‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                            >  2:228482‑M2/28‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                            >  1:3092089‑M2/28‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                            >  2:3761206‑M2/28‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATc                            >  1:1996920‑M2/28‑100 (MQ=255)
                                                                         GATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAAtcn                           >  2:2983774‑M1/1‑99 (MQ=255)
                                                                         GATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATcc                           >  1:2967047‑M1/1‑100 (MQ=255)
                                                                           ttcttcgTGTACGTCTTATCCGGTCTATGGGTCGGTCAGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTg                         <  1:2749043/95‑1 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGa                        >  2:1126060/1‑100 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGa                        <  2:2010312/100‑1 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATa                      >  1:1215525/1‑100 (MQ=255)
                                                                               gcgTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATACGTAATAACCATAATCCTGATAc                     >  1:1857957/1‑100 (MQ=255)
                                                                                   gAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACgcgc                 >  2:1615652/1‑100 (MQ=255)
                                                                                      cGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTgg              <  2:358989/100‑1 (MQ=255)
                                                                                        ccTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGgc             >  1:630465/1‑99 (MQ=255)
                                                                                        ccTTATCCGGCCTACCGGGCGATGCGAATGCAGGAGTCGTTATTTCGAATCCGACTTCTATTCGTATTCGTAATAGCCATAATCCTGATAcagcctgg              >  2:1139630/1‑91 (MQ=255)
                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg         >  1:3606375/1‑100 (MQ=255)
                                                                                           tATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcgg         >  2:3865297/1‑100 (MQ=255)
                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg       >  1:3496209‑M2/7‑100 (MQ=255)
                                                                                             tccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCgcggcg       <  1:533260‑M2/94‑1 (MQ=255)
                                                                                              ccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGcggcgg      >  2:3403437‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGcggcgg      >  1:1636710‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGcggcgg      >  2:1533196‑M2/6‑100 (MQ=255)
                                                                                               cggcCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGa     >  2:1823382‑M2/5‑100 (MQ=255)
                                                                                                  ccTACGGGGCGGTGCGAATGCAGGCGTCGTGATTTCGCATCGGACTTATATGCGTATTTGTATTAGCCATAATTGGGATATGCGCTGGCTCGGGGGAAg   >  2:1348771/1‑99 (MQ=255)
                                                                                                   |                                                                                                  
GGCATATAGATTGAGATCAGCGGATTGTTTTTCATAGGTTGTTCTCCCGGCTTATGAGCTGGTTTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGGGCGGTGCGAATGCAGGCGTCGTTATTTCGCATCCGACTTATATTCGTATTCGTAATAGCCATAATCCTGATACGCGCTGGCGCGGCGGAAGA  >  NC_000913/2133363‑2133560

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.