New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3898636NA (NA)10 (0.080) 6/162 NT NA noncoding (6/26 nt) REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3898650 NA (NA)noncoding (20/26 nt) REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 217 total aligned reads displayed.

TATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGC  >  NC_000913/3898553‑3898748
                                                                                                 |                                                                                                  
 aTCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtcc                                                                                                 <  1:1476605‑M2/100‑4 (MQ=255)
    catccttcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGc                                                                                              >  2:142763‑M1/73‑100 (MQ=255)
     ctTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtccggcc                                                                                             <  2:154545‑M2/100‑8 (MQ=255)
     ctTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAAAACAAACCAAAAAGTAATTCACACAtccggcc                                                                                             <  1:1078701‑M2/100‑8 (MQ=255)
      ttCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtccggcc                                                                                             >  2:829985‑M2/1‑92 (MQ=255)
      tccttcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCt                                                                                            >  1:1522690‑M1/71‑100 (MQ=255)
       ccttcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCtt                                                                                           >  1:2123781‑M1/70‑100 (MQ=255)
        ccGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTa                                                                                          >  1:3097467/1‑100 (MQ=255)
           cTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTAttt                                                                                       >  2:3017433/1‑100 (MQ=255)
            tGTCTCCATTCCTGCAAGCTGAGATTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGATAACAGGCCGGAGCGTAATTCACACACCCGGCCTTATTTc                                                                                      <  2:419091/100‑1 (MQ=255)
            tGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTc                                                                                      <  2:1009091/100‑1 (MQ=255)
            tGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTc                                                                                      <  1:946206/100‑1 (MQ=255)
             gTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCt                                                                                     >  1:3783473/1‑100 (MQ=255)
              tctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTc                                                                                      <  2:187485/98‑1 (MQ=255)
               ntcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   >  1:3307396/2‑100 (MQ=255)
               ctcCACTGCGGCAAGCTGTGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   <  1:2258756/100‑1 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTTTTATTTTTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCtt                                                                                    >  2:336190/1‑99 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   <  1:1210120/100‑1 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   >  1:3058710/1‑100 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   >  2:3003941/1‑100 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                   <  2:3287449/100‑1 (MQ=255)
                tcCACTGCGGCAAGCTGAGTCTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACTCTTCCGGCCTTATTTCTTaa                                                                                  <  2:3604730/100‑1 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                  >  2:2821367/1‑100 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                  <  1:1167883/100‑1 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                  >  2:1675628/1‑100 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                  >  2:464841/1‑100 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTAGGGTGATATTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTATAACAACCGGCCTTATTTCTTaa                                                                                  >  2:3694413/1‑100 (MQ=255)
                atggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                  >  1:1367047‑M1/61‑100 (MQ=255)
                 ccACTGCGGCAAGCTGAGACTGTGGTGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAg                                                                                 <  2:3648898/100‑1 (MQ=255)
                 ccACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAg                                                                                 >  1:814055/1‑100 (MQ=255)
                  cACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAAGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGc                                                                                >  1:1087391/1‑100 (MQ=255)
                    cTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCtt                                                                              <  1:3392459/100‑1 (MQ=255)
                      gCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTaa                                                                            >  2:1237250/1‑100 (MQ=255)
                       tcgctgataaagccgcttccgtagaattagtactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAAc                                                                           >  1:1105322‑M1/54‑100 (MQ=255)
                        ggCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCATAATTCACACATCAGGCCTTATTTCTTAAGCTTAAcc                                                                          >  1:840958/1‑100 (MQ=255)
                           aaGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAg                                                                       <  1:1875656/100‑1 (MQ=255)
                            aGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGt                                                                      <  1:2790744/100‑1 (MQ=255)
                              cTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGc                                                                    <  2:2969624/100‑1 (MQ=255)
                              cTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGc                                                                    <  1:3482480/100‑1 (MQ=255)
                                   aCTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAAtt                                                               >  1:3023125/1‑100 (MQ=255)
                                    cTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAAtt                                                               >  2:2497666/1‑99 (MQ=255)
                                      gtgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGGGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTg                                                            >  2:310755/1‑100 (MQ=255)
                                      gtgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTg                                                            >  2:3164168/1‑100 (MQ=255)
                                       tgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGc                                                           <  2:1269841/100‑1 (MQ=255)
                                        ggggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCg                                                          <  2:1481881/100‑1 (MQ=255)
                                         gggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCgg                                                         <  1:2011691/100‑1 (MQ=255)
                                         gggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCgg                                                         <  2:814046/100‑1 (MQ=255)
                                          ggTGATTTTTTGTTGTTATTTAAATAATGAGAACAGGCCGGAGTGTAATTTAGATATTCGGCGTTATTTCTTATGATTAATTGAGTGTTAATTTTGCg                                                          >  2:2744865/1‑98 (MQ=255)
                                          ggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGACTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGc                                                        >  1:672434/1‑100 (MQ=255)
                                           gcagaattagcactcggttaagcttaagaaataAGGTCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                       >  1:1738753‑M1/34‑100 (MQ=255)
                                              aTTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGc                                                     <  1:2774848/99‑1 (MQ=255)
                                                ttttCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGc                                                  <  1:3227805/100‑1 (MQ=255)
                                                   tCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACAGAGTGCTAATTCTGCGGCAGCGGCttt                                               >  1:3650035/1‑100 (MQ=255)
                                                   tCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCAGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCttt                                               >  2:133294/1‑100 (MQ=255)
                                                    cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                              <  2:3850761/100‑1 (MQ=255)
                                                    cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                              <  2:1476590/100‑1 (MQ=255)
                                                        gTTATTTAAATAATGATAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAg                                          <  1:612371/100‑1 (MQ=255)
                                                         ttATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                         <  1:2223663/100‑1 (MQ=255)
                                                          tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTTCGGCAGCGGCTTTATCAGCg                                        >  2:3244506/1‑100 (MQ=255)
                                                          tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCg                                        >  1:1546248/1‑100 (MQ=255)
                                                          tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCg                                        <  1:2741536/100‑1 (MQ=255)
                                                            tttAAATAATGAGAACAGGCCGGAGCGTAATTCTCTCATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                      <  1:2201330/100‑1 (MQ=255)
                                                            tttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                      <  2:672426/100‑1 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTATCCGAGTGCTAATTCTGCTGTAGCTGCTTTATCAGCGCTTa                                    <  2:648686/100‑1 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                    >  2:3475891/1‑100 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                    >  1:408456/1‑100 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                    >  1:2114086/1‑100 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTAAACCGAGTACTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                    >  1:133834/1‑100 (MQ=255)
                                                               aaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAc                                   >  1:693196/1‑100 (MQ=255)
                                                                 ataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCTGCAGCGGCTTTATCAGCGATTACCa                                 <  2:594320/100‑1 (MQ=255)
                                                                 ataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCa                                 >  2:218128/1‑100 (MQ=255)
                                                                 ataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCa                                 <  1:3457532/100‑1 (MQ=255)
                                                                   aatGAGACCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGCGCTAATTCTGCGGCAACGGCTTTATCAGCGATTACCATc                               >  2:268040/1‑100 (MQ=255)
                                                                   aatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATc                               <  1:3161681/100‑1 (MQ=255)
                                                                     tGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                             <  1:518421/100‑1 (MQ=255)
                                                                      gagaACAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagaca                            <  1:2664382‑M2/100‑73 (MQ=255)
                                                                      gagaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGc                            <  1:1044658/100‑1 (MQ=255)
                                                                       agaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                           >  2:3514811/1‑100 (MQ=255)
                                                                          aCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                        <  2:1978701/100‑1 (MQ=255)
                                                                          aCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                        <  1:1813857/100‑1 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagacagcgga                       <  1:1655770‑M2/100‑78 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagacagcgga                       <  1:3002319‑M2/100‑78 (MQ=255)
                                                                             ggCCGGCGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtcccagcttgccgcagtggagacagcggaag                     <  2:2305133‑M2/100‑80 (MQ=255)
                                                                             ggCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagacagcggaag                     <  2:2582267‑M2/100‑80 (MQ=255)
                                                                               CCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGc                   >  2:2871390‑M1/1‑100 (MQ=255)
                                                                                  GAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                >  1:2070685‑M1/1‑100 (MQ=255)
                                                                                   AGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCt               >  1:3363219‑M1/1‑100 (MQ=255)
                                                                                     cGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGc             <  1:3164198/100‑1 (MQ=255)
                                                                                     cGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGc             <  1:3712993/100‑1 (MQ=255)
                                                                                      gTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCa            <  2:380115/100‑1 (MQ=255)
                                                                                       tAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCTATTACCATCAGCGAAGGATGCAGCTGCaa           >  2:2355457/1‑100 (MQ=255)
                                                                                          ttCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac        <  1:2715969/100‑1 (MQ=255)
                                                                                           tCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg       <  1:442369/100‑1 (MQ=255)
                                                                                           tCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg       <  2:1587891/100‑1 (MQ=255)
                                                                                           tCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg       <  1:1608299/100‑1 (MQ=255)
                                                                                            cacacaTCCTGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACgg      <  1:1074505/100‑1 (MQ=255)
                                                                                             acacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGa     <  1:3609085/100‑1 (MQ=255)
                                                                                               acaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAg   >  2:2911760/1‑100 (MQ=255)
                                                                                               acaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAg   <  1:651513/100‑1 (MQ=255)
                                                                                                caTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGc  >  1:2585094/1‑100 (MQ=255)
                                                                                                 |                                                                                                  
TATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGC  >  NC_000913/3898553‑3898748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.