| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3231252 = | NA (NA) | 20 (0.140) | 10/164 | NT | NA | noncoding (1/283 nt) | REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences | REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences |
| ? | NC_000913 | 3231282 = | NA (NA) | noncoding (31/283 nt) | REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences | REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences | |||||
TCCGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3231357‑3231252‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGC > NC_000913/3231282‑3231380 TCCGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCA < 2:273396/100‑1TCCGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCA < 1:225032/100‑1 CCGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCA < 1:2154576/99‑1 CGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATC > 1:83907/1‑100 CGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATC > 2:1385182/1‑100 CGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATC > 2:1575882/1‑100 CGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATC > 2:2126549/1‑100 GCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCC > 1:64050/1‑100 GCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCC > 2:304630/1‑100 CCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTTCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCG < 2:180130/100‑1 CAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGC > 1:3199180/1‑100 AGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATGCGGCGTAAACGCCTTATCCGCC < 1:3416666/100‑1 AGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC < 1:2018151/100‑1 AGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC < 2:3542454/100‑1 GTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATTCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGC > 1:189424/1‑98 CCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCG‑CCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGC > 1:1373354/1‑100 GCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCG‑CCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATC > 1:499748/1‑100 AGGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCA > 1:874394/1‑100 GGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAC > 1:4259026/1‑100 GGGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCAC > 1:1354668/1‑100 GGCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACT > 1:3470331/1‑100 GCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTG > 2:1698996/1‑100 GCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTG > 2:100620/1‑100 CGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGG > 1:1363655/1‑100 CGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGG > 1:1987170/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 1:618757/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:3702229/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:2947177/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:387909/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:2515300/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:1999796/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 2:1698828/1‑100 GGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGC > 1:4182017/1‑100 TAAGGCGTTTACGCCGCATCCG‑CCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGA > 1:2344133/1‑99 GGCGTTTACGCCGCATCCG‑CCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCG < 2:499749/100‑1 CATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCT < 2:1354673/100‑1 ATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTT < 1:3700623/100‑1 ATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTT > 2:3449597/1‑100 ATCCGCCCTACATGTGCAATCCTCCAGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCTT < 1:4129189/100‑1 TCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTA < 1:3181797/100‑1 CCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTA > 1:140687/1‑99 CGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATC < 2:624763/100‑1 CGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATC > 2:891627/1‑100 CGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATC < 2:3645569/100‑1 CGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATC < 1:3360584/100‑1 CGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATC < 2:11442/100‑1 CCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCG > 2:3667090/1‑100 CCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCG > 1:2247750/1‑100 CCTACATGTGCAATCCTCCTGGCCGGATAACACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACAGGCGGATGCGGCGTGAACGCCTTCTCCGC > 1:486693/1‑100 TCCGCCAGTGGCGCGGTGCAGTTGCCGGATGCAACGCTTGCCGCGTTTTATCCGGCCAGGAGGATTGCACATGTAGGGCGGATAAGGCGTTTACGCCGCATCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3231357‑3231252‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGC > NC_000913/3231282‑3231380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |