BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3231252 =	NA (NA)	20 (0.140)	10/164	NT	NA	noncoding (1/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences
*	?	NC_000913	3231282 =	NA (NA)	20 (0.140)	10/164	NT	NA	noncoding (31/283 nt)	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP231 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 265 total aligned reads displayed.

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

  cTGGATTGCCGCGCATTTGTATATGTTGTATAACTATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                   <  2:1359949/100‑1 (MQ=255)

   tGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTAc                                                                                                  >  2:4215184/1‑100 (MQ=255)

   tGGAGTGCCGCGCATTTCTATATGTTTTATAACGATTATTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTa                                                                                                   <  2:840215/99‑1 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 <  1:467905/100‑1 (MQ=255)

    ggAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACa                                                                                                 >  1:1904413/1‑100 (MQ=255)

     gAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAt                                                                                                <  2:1508238/100‑1 (MQ=255)

     gAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAt                                                                                                >  2:2299734/1‑100 (MQ=255)

        tGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACAtgtg                                                                                             <  2:1208299/100‑1 (MQ=255)

         gCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGc                                                                                            >  2:1221636/1‑100 (MQ=255)

          ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                                                           >  1:3996613/1‑100 (MQ=255)

          ccGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCa                                                                                           >  1:1787926/1‑100 (MQ=255)

              gcATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcc                                                                                       <  2:1556444/100‑1 (MQ=255)

                aTTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctc                                                                                     >  2:2774641/1‑100 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGTAAtcctcc                                                                                    <  1:2227857/100‑1 (MQ=255)

                 tttGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAAtcctcc                                                                                    >  1:1867163/1‑100 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  2:2977111/100‑1 (MQ=255)

                   tGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTg                                                                                  <  1:3772935/100‑1 (MQ=255)

                    gTATATGTTGTATAACGATTTTTTCCGTACGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTgg                                                                                 <  1:4254730/100‑1 (MQ=255)

                     tataTGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGc                                                                                <  2:2672935/100‑1 (MQ=255)

                      atatGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAATGCCTTATCCGCTCTACATGTGCAATCCTCCTGGcc                                                                               <  1:3411844/100‑1 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                             >  1:3560674/1‑100 (MQ=255)

                        atGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCgg                                                                             >  2:264071/1‑100 (MQ=255)

                        atGGTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGAGGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCGGGCCg                                                                              >  2:2403584/1‑99 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGcc                                                                               >  1:1293541/1‑97 (MQ=255)

                         tgttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGa                                                                            <  1:2284115/100‑1 (MQ=255)

                          gttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGAt                                                                           >  2:2100921/1‑100 (MQ=255)

                           ttgtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATa                                                                          >  2:728978/1‑100 (MQ=255)

                             gtATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATaaa                                                                        >  1:42641/1‑100 (MQ=255)

                                taACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcg                                                                     >  2:2127565/1‑100 (MQ=255)

                                 aaCGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAAcgc                                                                    <  1:3431293/100‑1 (MQ=255)

                                   cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCgg                                                                  <  2:1858541/100‑1 (MQ=255)

                                   cGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTAGCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCgg                                                                  <  1:4331771/100‑1 (MQ=255)

                                    gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                 <  1:2726058/100‑1 (MQ=255)

                                    gATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGc                                                                 <  2:628617/100‑1 (MQ=255)

                                      ttttttCCTTAATCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCaa                                                               >  1:2530186/1‑100 (MQ=255)

                                       tttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCa                                                                <  1:3662155/98‑1 (MQ=255)

                                        ttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGc                                                             <  2:1265082/100‑1 (MQ=255)

                                        ttttCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGc                                                             >  1:1610402/1‑100 (MQ=255)

                                           tCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGtt                                                          >  2:1951340/1‑100 (MQ=255)

                                             ccggccaggaggattgcacatgtagggcggataaggcgtttacgccgcatccgcCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGc                                                        >  1:1373354‑M2/55‑100 (MQ=255)

                                             cGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTg                                                         >  2:2229201/1‑99 (MQ=255)

                                             cGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGc                                                        >  1:783937/1‑100 (MQ=255)

                                             cGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGc                                                        >  2:4005365/1‑100 (MQ=255)

                                               tAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCAt                                                      >  2:3841447/1‑100 (MQ=255)

                                                gccaggaggattgcacatgtagggcggataaggcgtttacgccgcatccgcCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATc                                                     >  1:499748‑M2/52‑100 (MQ=255)

                                                aaGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATc                                                     >  1:3507449/1‑100 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    >  1:14324/1‑100 (MQ=255)

                                                 aGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATcc                                                    <  1:977358/100‑1 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTCAACGCCTTGTCCGCCCTACATGTGCAATCCTACTGGCCGGGTAAGCCGCGGCCAGGGTGGCa                                                       >  1:4080787/1‑94 (MQ=18)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  1:854850/100‑1 (MQ=255)

                                                    aataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGc                                                 <  2:1066403/100‑1 (MQ=255)

                                                     ataatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCa                                                <  2:2029142/100‑1 (MQ=255)

                                                      taatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCaa                                               >  1:116619/1‑100 (MQ=255)

                                                       aatTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAAc                                              <  2:2888260/100‑1 (MQ=255)

                                                        atTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAAc                                              >  2:405265/1‑99 (MQ=255)

                                                            gCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAc                                         <  2:2605032/100‑1 (MQ=255)

                                                             cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAcc                                        >  1:1685860/1‑100 (MQ=255)

                                                             cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAcc                                        <  1:3887430/100‑1 (MQ=255)

                                                             cAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAcc                                        <  2:169695/100‑1 (MQ=255)

                                                               aCTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGCCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACcgc                                      >  2:1744682/1‑100 (MQ=255)

                                                                ctgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACcgcg                                     >  1:643605/1‑100 (MQ=255)

                                                                ctgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACcgcg                                     >  2:3139876/1‑100 (MQ=255)

                                                                 tgctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCgcgc                                    <  2:544525/100‑1 (MQ=255)

                                                                  gctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   >  1:3118930/1‑100 (MQ=255)

                                                                  gctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   >  1:2450979/1‑100 (MQ=255)

                                                                  gctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   >  1:3250812/1‑100 (MQ=255)

                                                                  gctgGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGcc                                   <  2:3064588/100‑1 (MQ=255)

                                                                     GGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACt                                <  2:3542454‑M1/100‑1 (MQ=255)

                                                                      gcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                               >  2:100620‑M2/30‑100 (MQ=255)

                                                                      gcggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTg                               >  2:1698996‑M2/30‑100 (MQ=255)

                                                                       cggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                              >  1:1987170‑M2/29‑100 (MQ=255)

                                                                       cggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTgg                              >  1:1363655‑M2/29‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  2:2515300‑M2/28‑100 (MQ=255)

                                                                        ggataaggcgtttacgccgcatccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGc                             >  1:618757‑M2/28‑100 (MQ=255)

                                                                         GATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                            >  2:1385182‑M1/1‑100 (MQ=255)

                                                                         GATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCg                            >  1:83907‑M1/1‑100 (MQ=255)

                                                                           TGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCgg                           <  1:2154576‑M1/99‑1 (MQ=255)

                                                                            taaggcgtttacgccgcatccgcCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGa                          >  1:2344133‑M2/24‑99 (MQ=255)

                                                                            gcggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTAGCATCCGGCAACTGCACCGCGCCACTGGCGGAt                         >  1:937047/1‑100 (MQ=255)

                                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATg                        >  2:1585220/1‑100 (MQ=255)

                                                                               ggcgtttacgccgcatccgcCAGCAGTTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcg                      <  2:499749‑M2/80‑1 (MQ=255)

                                                                               gcgTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcg                      >  1:1630476/1‑100 (MQ=255)

                                                                                 gTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTTGCGGATgcggc                    >  2:4398507/1‑100 (MQ=255)

                                                                                 gTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATgcggc                    <  2:348789/100‑1 (MQ=255)

                                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTg                 <  2:3781396/100‑1 (MQ=255)

                                                                                      cGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTgga               >  2:3700649/1‑98 (MQ=255)

                                                                                        ccTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACg             <  1:1013765/100‑1 (MQ=255)

                                                                                         cgtgtctggccTACATGTGCCAGCCTCCGGACCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCAGCGCGCCACTGGCGGATGAGGCGTGa                <  1:2313665/87‑1 (MQ=17)

                                                                                         cTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGc            >  2:3913944/1‑100 (MQ=255)

                                                                                            atccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCtt         >  2:3449597‑M2/8‑100 (MQ=255)

                                                                                            atccgccCTACATGTGCAATCCTCCAGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGGACGCCtt         <  1:4129189‑M2/93‑1 (MQ=255)

                                                                                             tccgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa        <  1:3181797‑M2/94‑1 (MQ=255)

                                                                                              ccGCACTACATGTCCAATCCGCCTGGCCCGATAAAACGCGGCAAGCGTTACATCCGGCAACTACACCGCGCCACTGGCTCATACGGCCTGAACGCCtt         >  1:2701880/1‑98 (MQ=17)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      <  1:3360584‑M2/96‑1 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      <  2:3645569‑M2/96‑1 (MQ=255)

                                                                                               cgccCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATc      >  2:891627‑M2/5‑100 (MQ=255)

                                                                                                  cCTACATGTGCAATCCTCCTGGCCGGATAACACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACAGGCGGATGCGGCGTGAACGCCTTCTCCGc   >  1:486693‑M2/2‑100 (MQ=255)

                                                                                                   cTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGCACGCCTTATCCGc   >  1:2806180/1‑99 (MQ=255)

                                                                                                   cTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGcc  <  1:1354601/100‑1 (MQ=255)

                                                                                                   cTACATGTGCAATCCTCCGGGCCGGATAAAACGCGGCAAGCGTGGCATCCGGCAACTGCACCGCGCCACTGGCGGATAAGGCGTTCACGCCGCATCCGcc  <  1:2096842/100‑1 (MQ=17)

TCCTGGAGTGCCGCGCATTTGTATATGTTGTATAACGATTTTTTCCGTAAGCAATAATTTGCAACTGCTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCTCCTGGCCGGATAAAACGCGGCAAGCGTTGCATCCGGCAACTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCC  >  NC_000913/3231183‑3231381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.