| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3241195 = | 139 (0.880) | 23 (0.160) | 16/162 | NT | 16.3% | coding (550/552 nt) | ygjV | Imp‑YgjV family inner membrane protein |
| ? | NC_000913 | 3241224 = | 110 (0.770) | coding (521/552 nt) | ygjV | Imp‑YgjV family inner membrane protein | |||||
TGCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3241299‑3241195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggggttTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCGTG > NC_000913/3241224‑3241322 TGCTTATGAATGGCCTGAATATTATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAACACACCTTCCGCCGTAGAAGAAAG < 1:3273604/100‑1TGCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAG < 2:1602367/100‑1 GCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGG < 2:2045032/100‑1 TTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGG < 1:3128582/100‑1 TTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGG < 2:3317906/100‑1 TATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGT < 2:1073878/100‑1 TATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGT > 1:2769638/1‑100 TATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGG > 1:2300275/1‑99 TATGAATGGCCTGAATATCATTCGTGTCTGGCTGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTCAGAAAACCCCTTCCGCCGTAGACGAAAGGG < 2:3039975/98‑1 ATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTT < 2:2913035/100‑1 GAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATACGTTTAAAGGTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGG > 1:2572985/1‑96 GAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTT > 2:1997964/1‑100 CAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTACGCCGTAGACGAAAGGGGTTTTCTCCACTTTAAACGGATCAATTAACCTTTTCT > 1:246399/1‑98 TCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAAT < 1:1997957/100‑1 GTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGAT > 1:331122/1‑100 AAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTC > 2:3449782/1‑100 AAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCA > 2:848070/1‑100 GTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGG > 2:4306540/1‑100 TTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGC > 2:1728267/1‑100 TGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAGTTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCC > 1:2819166/1‑100 TGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGGTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCC > 2:2753233/1‑100 GAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCA > 2:2476662/1‑100 GAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCCCCAGAAACGAATGATATTCAGGCCA > 1:3351897/1‑100 GAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTAAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCA > 1:3000878/1‑100 AGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCAT > 1:4242413/1‑100 AGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCAT > 1:484473/1‑100 AGAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCAT > 1:1151566/1‑100 GAAAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATT > 2:856509/1‑100 AAACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTATGTATCCGCCAGAAACGAATGATATTCAGGCCATTCA > 1:3589383/1‑100 AACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCAT > 2:3470915/1‑100 AACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCAT > 1:1629911/1‑100 ACCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATA > 1:2998112/1‑100 caCCTTCCGCCGTAGACGAAAGGGGTTTTCTAAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAA > 2:2982130/3‑100 CCCCTTCCGCCGTAGACGAAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAA > 1:4404291/1‑100 GGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCA < 2:2076966/100‑1 GGGGTCTTCTCAACTTTAAACGGATCTATCCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTC < 1:2893948/95‑1 GGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCAT > 1:4207880/1‑100 GGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATC > 1:318627/1‑100 GTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCG > 2:4041679/1‑100 TTTTCTCAACTTTAAACGGATCAATTCCCCTGTTCTGCATCCGCCAGAAACGGATGATATTCAGGCCATTCATAAGCAGAAAACGATCCTCAATCATCG < 1:1286701/99‑1 TTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCGTG < 2:225362/100‑1 TTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCGTG < 2:2508758/100‑1 TTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCGTG > 1:110901/1‑100 TGCTTATGAATGGCCTGAATATCATTCGTTTCTGGCGGATGCAGAAAAGGGGAATTGATCCGTTTAAAGTTGAGAAAACCCCTTCCGCCGTAGACGAAAGGGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3241299‑3241195‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaggggttTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCATAAGCAGAAAACTACCCTCAATCATCGTG > NC_000913/3241224‑3241322 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |