New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3241195 =139 (0.880)23 (0.160) 16/162 NT 16.3% coding (550/552 nt) ygjV Imp‑YgjV family inner membrane protein
?NC_000913 3241224 = 110 (0.770)coding (521/552 nt) ygjV Imp‑YgjV family inner membrane protein

Only 100 of 190 total aligned reads displayed.

ACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCAT  >  NC_000913/3241096‑3241294
                                                                                                   |                                                                                                   
cacgatgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaa                                                                                                     >  1:110901‑M1/100‑100 (MQ=255)
cacgatgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaa                                                                                                     <  2:2508758‑M1/1‑1 (MQ=255)
aCCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTa                                                                                                     <  2:14151/100‑1 (MQ=255)
 ccGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTaa                                                                                                    >  2:704537/1‑100 (MQ=255)
 ccGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTa                                                                                                     <  1:998665/99‑1 (MQ=255)
  cgatgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAAc                                                                                                   >  2:4041679‑M1/98‑100 (MQ=255)
   gcgcTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAAcc                                                                                                  >  2:963651/1‑100 (MQ=255)
   gcgcTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGCAATTAATTGTTTAAcc                                                                                                  >  1:2584664/1‑100 (MQ=255)
   gatgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAAcc                                                                                                  >  1:318627‑M1/97‑100 (MQ=255)
    cgcTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAAccc                                                                                                 <  2:167702/100‑1 (MQ=255)
    atgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAAccc                                                                                                 >  1:4207880‑M1/96‑100 (MQ=255)
     tgattgagggtagttttctgcttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAAcccc                                                                                                <  2:2076966‑M1/6‑1 (MQ=255)
     gcTGAGCTCTTCAACTGACGTGCCGTTCCCTGCGGCAGCTTGCCAGGCACACGACGATCGTCTGTCAAATAGCGCCCTGCGTAATTAATTGTTTGAcc                                                                                                  <  1:3719398/98‑1 (MQ=255)
        gAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCATAATTAATTGTTTAACCCCttt                                                                                             >  2:1213761/1‑100 (MQ=255)
          aCTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCg                                                                                           >  1:4007611/1‑100 (MQ=255)
          aCTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCg                                                                                           <  1:459379/100‑1 (MQ=255)
             ctTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCt                                                                                        >  2:2434531/1‑100 (MQ=255)
              ttCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTa                                                                                       <  2:4308279/100‑1 (MQ=255)
              ttCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCACCCTACGTAATTAATTGTTTAACCCCTTTCGTCTa                                                                                       >  2:2762738/1‑100 (MQ=255)
               tCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAACTAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAc                                                                                      >  1:1260322/1‑100 (MQ=255)
               tCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAc                                                                                      >  2:246974/1‑100 (MQ=255)
                cAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAcg                                                                                     >  1:1320440/1‑100 (MQ=255)
                cAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAcg                                                                                     >  1:1943332/1‑100 (MQ=255)
                cAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAcg                                                                                     >  2:1976708/1‑100 (MQ=255)
                   cTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTAcggcg                                                                                  <  2:618431/100‑1 (MQ=255)
                       cGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAAATGTTTAACCCCTTTCGTCTACGGCGGAAg                                                                              >  1:2659160/1‑100 (MQ=255)
                        gTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAgg                                                                             <  2:492422/100‑1 (MQ=255)
                         tGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAggg                                                                            <  2:3536875/100‑1 (MQ=255)
                         tGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAggg                                                                            >  2:3878910/1‑100 (MQ=255)
                          ttatgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagtttagaaAACCCCTTTCGTCTACGGCGGaaggtg                                                                           >  2:2982130‑M1/74‑98 (MQ=255)
                          gCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAgggg                                                                           >  2:4147821/1‑100 (MQ=255)
                          gCTGGTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAgcgg                                                                           <  1:3616623/100‑1 (MQ=255)
                            tGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGtt                                                                         >  1:54938/1‑100 (MQ=255)
                            atgaatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGtt                                                                         >  2:3470915‑M1/72‑100 (MQ=255)
                             gTTCACTGCGGCAGCTTGCCAGGCAGAAGACGTTCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGttt                                                                        <  2:3230933/100‑1 (MQ=255)
                             gTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGttt                                                                        >  2:3743357/1‑100 (MQ=255)
                               aatggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTtc                                                                      >  2:856509‑M1/69‑100 (MQ=255)
                                atggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTtct                                                                     >  1:1151566‑M1/68‑100 (MQ=255)
                                atggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTtct                                                                     >  1:4242413‑M1/68‑100 (MQ=255)
                                 tggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagtttagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTtctc                                                                    >  1:3000878‑M1/67‑100 (MQ=255)
                                  ggcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaACCCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCa                                                                   >  2:2753233‑M1/66‑100 (MQ=255)
                                  ctacGGCACCTTGCCAGGCAGAAGACGATCGTCTGGCAACGAGCGCCCTGCGTAATTACTTGTTTAACCCCTCTCGACTACGGCCGAAAGCGGTTtc                                                                      >  1:1853503/4‑97 (MQ=255)
                                  cTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGACCTGCGTAATTAATTGTTTAACCACTTTCGTCCACGGCGCAAGCGCttt                                                                        >  1:4407799/1‑95 (MQ=255)
                                   gcctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCaa                                                                  >  2:1728267‑M1/65‑100 (MQ=255)
                                    gCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAAc                                                                 <  1:2202581/100‑1 (MQ=255)
                                    cctgaatatcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAAc                                                                 >  2:4306540‑M1/64‑100 (MQ=255)
                                      ggCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACtt                                                               <  1:969438/100‑1 (MQ=255)
                                       gCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACttt                                                              >  2:3138118/1‑100 (MQ=255)
                                        cAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTa                                                             >  1:2863305/1‑100 (MQ=255)
                                          gCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTaaa                                                           >  1:3495213/1‑100 (MQ=255)
                                           cTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAAc                                                          <  2:944834/100‑1 (MQ=255)
                                           atcattcgtttctggcggatgcagaaaaggggaattgatccgtttaaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAAc                                                          >  1:331122‑M1/57‑100 (MQ=255)
                                            ttGCCAGGCAGAAGACGATCGTCTAGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAAc                                                          <  1:2127799/99‑1 (MQ=255)
                                              gCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGa                                                       <  2:3495236/100‑1 (MQ=255)
                                               ccAGGCAGAAGACGATCGTCTTGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACggtt                                                      >  1:1638812/1‑98 (MQ=255)
                                               ccAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGAt                                                      >  1:2783279/1‑100 (MQ=255)
                                                cAGGCAGAAGACGATCGTCTGGCAAATAGCTCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAAGGGTTTTCTCACCTTTAACCGGATc                                                     >  1:2717245/1‑100 (MQ=255)
                                                cAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGAt                                                      <  2:3766413/99‑1 (MQ=255)
                                                cAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATc                                                     <  2:1699417/100‑1 (MQ=255)
                                                      gaagaCGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTTTGTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTcc                                               <  1:4337606/100‑1 (MQ=255)
                                                        agaCGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTcccc                                             >  2:3945701/1‑100 (MQ=255)
                                                         gaCGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTcccc                                             <  1:1051496/99‑1 (MQ=255)
                                                          aCGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCtt                                           >  1:2828632/1‑100 (MQ=255)
                                                          aCGATCGTCTGGCAAATACCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGACAGAAGGGGTTCACCCAACTTTAAACCGCTCAATTCCCCtt                                           >  1:4174598/1‑100 (MQ=255)
                                                           cGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCttt                                          >  1:341788/1‑100 (MQ=255)
                                                           cGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCttt                                          >  1:789629/1‑100 (MQ=255)
                                                            gATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCtttt                                         <  1:3218805/100‑1 (MQ=255)
                                                             aTCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTc                                        <  2:801082/100‑1 (MQ=255)
                                                               cGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTg                                      <  2:2224971/100‑1 (MQ=255)
                                                               cGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTg                                      <  2:3490247/100‑1 (MQ=255)
                                                                 tCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCa                                    <  1:3684032/100‑1 (MQ=255)
                                                                 agaaaaggttaattgatccgtttaaagtggagaaAACCCCTTTCGTCTACGGCGTAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTg                                      >  1:246399‑M1/35‑98 (MQ=255)
                                                                   tGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATc                                  >  2:2841079/1‑100 (MQ=255)
                                                                     gCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTTCATcc                                 >  1:3892191/1‑99 (MQ=255)
                                                                      cAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGc                               >  2:1756065/1‑100 (MQ=255)
                                                                         aTAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAg                            <  1:1748725/100‑1 (MQ=255)
                                                                         aTAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCGACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGcc                              <  1:282968/98‑1 (MQ=255)
                                                                          tAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGa                           <  2:1590008/100‑1 (MQ=255)
                                                                          tAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGa                           <  1:2536919/100‑1 (MQ=255)
                                                                          tAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGa                           >  2:722038/1‑100 (MQ=255)
                                                                            gcgcCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGaaa                         >  1:2120243/1‑100 (MQ=255)
                                                                            gcgcCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCACCTTTTCTGCATCCGCCAGaaa                         >  1:2933637/1‑100 (MQ=255)
                                                                                 cTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAAt                    <  2:1794643/100‑1 (MQ=255)
                                                                                 cTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAAt                    <  1:1591129/100‑1 (MQ=255)
                                                                                 cTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAAt                    <  1:1090203/100‑1 (MQ=255)
                                                                                  tGCGTAATTAATTGTTTACCCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATg                   <  2:1320445/100‑1 (MQ=255)
                                                                                  tGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATg                   <  1:120984/100‑1 (MQ=255)
                                                                                  tGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATg                   <  2:2336444/100‑1 (MQ=255)
                                                                                    cGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGCTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGat                 <  1:3087999/100‑1 (MQ=255)
                                                                                     gTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGata                >  2:2596994/1‑100 (MQ=255)
                                                                                        attaattGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTc             >  2:2305306/1‑100 (MQ=255)
                                                                                        aaagttgagaaAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTc             >  2:1997964‑M1/12‑100 (MQ=255)
                                                                                         ttaattGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCa            <  1:1361498/100‑1 (MQ=255)
                                                                                         ttaattGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCa            <  2:3906841/100‑1 (MQ=255)
                                                                                               gTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCAt      >  1:2013572/1‑100 (MQ=255)
                                                                                               gTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCAt      <  1:747711/100‑1 (MQ=255)
                                                                                                 ttAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTc    <  1:3062578/100‑1 (MQ=255)
                                                                                                 ttAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTc    >  2:3428359/1‑100 (MQ=255)
                                                                                                  tAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCa   >  2:3375972/1‑100 (MQ=255)
                                                                                                   AACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCAt  <  2:2913035‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ACCGCGCTGAACTCTTCAACTGACGTGCTGTTCACTGCGGCAGCTTGCCAGGCAGAAGACGATCGTCTGGCAAATAGCGCCCTGCGTAATTAATTGTTTAACCCCTTTCGTCTACGGCGGAAGGGGTTTTCTCAACTTTAAACGGATCAATTCCCCTTTTCTGCATCCGCCAGAAACGAATGATATTCAGGCCATTCAT  >  NC_000913/3241096‑3241294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.