| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 774622 | 131 (0.830) | 23 (0.160) | 10/166 | NT | 15.9% | intergenic (+20/‑130) | ybgE/ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase |
| ? | NC_000913 | = 774648 | 122 (0.830) | intergenic (+46/‑104) | ybgE/ybgC | putative inner membrane protein in cydABX‑ybgE operon/acyl‑CoA thioester hydrolase | |||||
GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/774518‑774622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG < NC_000913/774648‑774550 GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT > 2:1391668/1‑100GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTATTCTTCTTTTAAATCATAATTCTATTT > 1:2143885/1‑100 CAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTA < 2:2368239/100‑1 CAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTT < 1:3854137/99‑1 AGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAA < 2:169630/100‑1 GAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAA > 2:2627892/1‑100 AAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAA < 2:2951039/100‑1 AGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA > 1:1811007/1‑100 GGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATGTTGTTCTAATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAA > 1:2905412/1‑97 GCCCATTGCTTGCCGTTATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATA < 1:1611179/100‑1 TTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTT < 1:162731/100‑1 GCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTT < 2:444272/100‑1 TTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTACAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAA < 2:3117003/100‑1 TGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTTTAAt < 2:1783942/100‑2 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 2:3365546/100‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 2:772203/100‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 1:527011/100‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAA < 2:133314/99‑1 GCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 2:473425/100‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGA < 2:2743411/100‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGA < 2:749329/100‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGA < 2:2520570/100‑1 CCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAAATTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGA < 2:1931779/100‑1 CGATATTTTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAACAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAG < 1:760193/98‑1 CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGTGCGGCCCATAATTTTTTAAAGAG < 1:1138066/100‑1 CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG < 2:121087/100‑1 CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG < 2:3886212/100‑1 CGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG < 2:139452/100‑1 GATATTGTTCTCATTGTCGTGCTGATTTTGTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAG < 1:1769449/99‑1 GATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAt < 1:565392/99‑2 ATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAA < 2:1875273/100‑1 TTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTC < 1:1796958/100‑1 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCTGCAAG > 1:1391663/1‑100 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG < 2:3685612/100‑1 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG < 2:1751416/100‑1 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG > 2:2828394/1‑100 TAAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAG > 1:4390095/1‑100 AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGC < 2:1281970/100‑1 AAAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGC < 1:2687036/100‑1 AAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCA > 2:4111022/1‑100 AAAATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATGTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCA > 2:3606837/1‑100 AATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGACAAGCAA > 1:1167317/1‑99 ATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG < 2:1959977/100‑1 ATTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG < 2:393031/100‑1 GCAGAAGGTTCTTTGGCAAGGGATTTTTTGCCCATTGCTTGCCGATATTGTTCTCATTGTCGGGCTGATTTTCTTCTTCTTTTAAATCAGAATTCTCTTTAAAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/774518‑774622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaaaTTTATGGGCCTGGAGCGGCCCATAATTTTTTAAAGAGAATTCTGATTTAAAAGAAGAAGAAAATCAGCCCGACAATGAGAACAATATCGGCAAGCAATG < NC_000913/774648‑774550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |