New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2972673	100 (1.090)	18 (0.200)	14/172	NT	15.0%	coding (1190/1194 nt)	lplT	lysophospholipid transporter
	?	NC_000913	= 2972702	107 (1.210)					coding (1161/1194 nt)	lplT	lysophospholipid transporter

TAAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2972573‑2972673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACC  <  NC_000913/2972702‑2972604                                                                                                                                                                                                          TAAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAA                                                                                                      <  2:2279012/100‑1  AAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAAT                                                                                                     >  1:1901839/1‑100  AAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAAT                                                                                                     <  2:2311835/100‑1   AGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAAT                                                                                                     <  1:2319755/99‑1                       AATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCA                                                                                >  2:1972620/1‑100                            AAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATGACGGCGCTGTGGATCTGGCAGCGCC                                                                           <  1:2217858/100‑1                            AAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCC                                                                           <  2:2184343/100‑1                              GCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATGACGGCGCTGTGGATCTGGCAGCGCCGT                                                                         <  2:720413/100‑1                               CGGTGCATCAGGTTTATACTTATCCGGCACTATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATGACGGCGCTGTGGATCTGGCAGCGCCGTC                                                                        <  2:353263/100‑1                                GGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCA                                                                       <  1:2091814/100‑1                                 GTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCAT                                                                      <  2:2369319/100‑1                                  TGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATT                                                                     <  2:1767693/100‑1                                    CATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATGACGGCGCTGTGGATCTGGCAGCGCCGTCATTAA                                                                   <  2:275272/100‑1                                      TCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATA                                                                 <  2:1812316/100‑1                                       tcagcTTATACTTCCCCGGTACCATAAGATTAACCCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAAT                                                                  <  1:1488895/93‑1                                        AGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATT                                                               <  1:1087172/100‑1                                         ctTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTT                                                              <  2:2374677/98‑1                                           TTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAg                                                            >  1:2374662/1‑99                                            TTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCTGCGTTAAATATTAATAACGGCGCTGTGCATCTGGCAGCGCCGTCATTAATATT                                                               <  1:632741/96‑1                                            TTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAAC                                                           <  1:1972609/100‑1                                             TATACTTATCCGGCA‑CATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGC                                                         <  1:2134589/100‑1                                              ATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGC                                                         <  1:404979/100‑1                                                                                                    ATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCAC   >  2:92465/1‑100                                                                                                    ATAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCAC   >  2:1903733/1‑100                                                                                                     TAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACC  <  1:803641/100‑1                                                                                                     TAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACC  >  1:1648049/1‑100                                                                                                     TAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACC  >  1:1647765/1‑100                                                                                                                                                                                                          TAAGCGAAGACGTATTAGCTGAAATTGAAGCGGTGCATCAGGTTTATACTTATCCGGCACCATAAGATTAACGCCGGTTAAAACCGGCGTTAAATATTAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2972573‑2972673 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aatAACGGCGCTGTGGATCTGGCAGCGCCGTCATTAATATTTAACGCCGGTTTTAACCGGCGTTAATCTTATGGTGCCGGATAAGTATAAACCTGATGCACC  <  NC_000913/2972702‑2972604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.