New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)14 (0.160) 9/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 144 total aligned reads displayed.

CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234
                                                                                                   |                                                                                                   
 gACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGg                                                                                                    <  1:1336672‑M1/100‑2 (MQ=255)
     cTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccgg                                                                                                <  2:1640042‑M1/100‑6 (MQ=255)
      tGCGCGTCTGGTCCGGCCTGCGGGGATGCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTATGTGAACAGGAAGAAATCTATGTTGGCCggg                                                                                               <  2:477690/100‑1 (MQ=38)
        cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                                                                                             >  1:1093178/1‑100 (MQ=255)
          cgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGCCAATCTGTACGTGAACAGGAAGAAATCTATGTTGACCGGGTAAg                                                                                           >  1:1287279/1‑100 (MQ=255)
           gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg                                                                                          <  1:515734/100‑1 (MQ=255)
           gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg                                                                                          <  2:1800689/100‑1 (MQ=255)
              ttGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCgg                                                                                       >  2:203582/1‑100 (MQ=255)
               tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa                                                                                      >  1:1193712/1‑100 (MQ=255)
                gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg                                                                                     >  2:55502/1‑100 (MQ=255)
                 tCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc                                                                                    <  2:1093182/100‑1 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   <  2:2038304/100‑1 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   >  2:2173824/1‑100 (MQ=255)
                  ccGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc                                                                                   >  2:2323657/1‑100 (MQ=255)
                   cGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcca                                                                                  >  2:235773/1‑99 (MQ=255)
                   cGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCg                                                                                  >  2:521376/1‑100 (MQ=255)
                    ggCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc                                                                                 <  2:1705368/100‑1 (MQ=255)
                     gCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct                                                                                <  2:461421/100‑1 (MQ=255)
                     gCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGAAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct                                                                                >  2:1817368/1‑100 (MQ=255)
                        tccgatcttccaggtcgGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacc                                                                             <  2:1224759‑M1/92‑25 (MQ=255)
                        tACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTC                                                                             <  1:1847304‑M2/100‑1 (MQ=255)
                        tACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCAGctct                                                                              >  1:50718/1‑99 (MQ=255)
                          cGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCG                                                                           <  1:2522998‑M2/100‑1 (MQ=255)
                           ggggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGG                                                                          >  2:2494119‑M2/1‑100 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                         >  1:837882‑M2/1‑100 (MQ=255)
                            gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                         >  1:2530670‑M2/1‑100 (MQ=255)
                             ggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGTAATCTATGTTGgccggagagcggctccgccttacccggcc                                                                        <  1:1618776‑M1/100‑30 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGATATCTATGTTGgccggagagcggctccgccttacccggccaa                                                                      <  1:2058702‑M1/98‑32 (MQ=255)
                                 ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                    <  2:726995/100‑1 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaan                                                                   <  1:1195781/100‑2 (MQ=255)
                                  cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                   >  2:469886/1‑100 (MQ=255)
                                  cAGGTCGGATAAGGCGGTTACGCCGCAGCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                   <  2:1883579/100‑1 (MQ=255)
                                   aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacata                                                                  <  2:814825‑M1/100‑36 (MQ=255)
                                   aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAAAAGGAAGAAATCTATGTTGGCCGGATAAGACGGAGCAGCTATCCGGCAAAAAGa                                                                  >  1:2328056/1‑100 (MQ=38)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                 <  2:2254939/100‑1 (MQ=255)
                                    ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                 <  2:294895/100‑1 (MQ=255)
                                     gTCGGATGCGGCGTAAACGCCTTATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGa                                                                  >  1:698626/1‑98 (MQ=37)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacataga                                                                <  2:1599524‑M1/100‑38 (MQ=255)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                <  2:2239449/100‑1 (MQ=255)
                                     gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                <  2:1723924/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                               <  2:2090348/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                               <  2:558947/100‑1 (MQ=255)
                                      tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                               <  2:951907/100‑1 (MQ=255)
                                        ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaacatagattt                                                             <  2:1762714‑M2/100‑13 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            <  1:1857140/100‑1 (MQ=255)
                                         gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                            <  2:232704/100‑1 (MQ=255)
                                          aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                           >  1:85072/1‑100 (MQ=255)
                                            aaGGCGTTTAAGCCGCATCCGACAATCTGTACGTAAACAGGAAGCAATCTATGTTGGCCGGGTAAGGAGCAGCCGCTCTCCGGCAAAAAGAATCCATAAc                                                         >  1:891242/1‑100 (MQ=255)
                                             aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                        >  2:255411/1‑100 (MQ=255)
                                              ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                       >  2:185544/1‑100 (MQ=255)
                                              ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                       >  1:170459/1‑100 (MQ=255)
                                               gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                      <  1:525933/100‑1 (MQ=255)
                                                    tACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccggagagcggctccgccttacccggccaacatagatttcttcctgttcac                                                 <  2:1033133‑M1/100‑53 (MQ=255)
                                                       gccgcATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATAcgcg                                              <  1:2297223/100‑1 (MQ=255)
                                                           cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                          <  2:1847314/100‑1 (MQ=255)
                                                            aTCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAcc                                         >  1:1463969/1‑100 (MQ=255)
                                                              ccGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                        >  2:226379/1‑99 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                      <  1:1047657/100‑1 (MQ=255)
                                                               cGACAATCTGTACGTGAACAGGAAGAAATCCATGTTGGCCGGGTGAGGCGGAGCCGCTCTCAGGCAAAAAGAATCAATAACAATTATCCGCGTGATCCgg                                      >  1:370176/1‑100 (MQ=255)
                                                                   aaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGcgcg                                  <  2:442765/100‑1 (MQ=255)
                                                                     tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                <  2:1099643/100‑1 (MQ=255)
                                                                        gcaCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                             >  2:2400608/3‑100 (MQ=255)
                                                                            gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgta                         <  2:2335187‑M2/100‑49 (MQ=255)
                                                                            gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgta                         <  2:1033133‑M2/100‑49 (MQ=255)
                                                                              gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                       >  1:94302/1‑100 (MQ=255)
                                                                              gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAGAACAAGTATACGCGTGACCCGGCGCGGGAAATGTCgg                       >  1:1747612/1‑100 (MQ=255)
                                                                               aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                        >  1:1904297/1‑98 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                     <  2:1809187/100‑1 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                     <  2:1064074/100‑1 (MQ=255)
                                                                                aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCCGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                     <  1:1254953/100‑1 (MQ=255)
                                                                                 cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgc                    <  2:473481‑M2/100‑54 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                  >  1:1466059/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                  >  2:2459574/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                  >  2:1880780/1‑100 (MQ=255)
                                                                                   ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcga                  >  2:517724/1‑99 (MQ=255)
                                                                                    gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                 >  2:2306591/1‑100 (MQ=255)
                                                                                    gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                 >  2:628381/1‑100 (MQ=255)
                                                                                    gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                 <  1:2477317/100‑1 (MQ=255)
                                                                                        aaaTCTATGTTTgccggagagcggctccgccttacccggccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatcc             <  2:1762714‑M1/100‑89 (MQ=255)
                                                                                         aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc            >  2:133326/1‑100 (MQ=255)
                                                                                         aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc            <  2:2410652/100‑1 (MQ=255)
                                                                                         aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc            >  2:145276/1‑100 (MQ=255)
                                                                                         aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc             >  2:2301493/1‑99 (MQ=255)
                                                                                           tCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgac          <  2:1599524‑M2/100‑64 (MQ=255)
                                                                                            cTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAg         >  2:672040/1‑100 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacct        <  1:1730342‑M2/100‑66 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacct        <  2:814825‑M2/100‑66 (MQ=255)
                                                                                             tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt        >  2:876105/1‑100 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctg       <  1:2858‑M2/100‑67 (MQ=255)
                                                                                              aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg       <  2:354818/100‑1 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga     <  1:2363157‑M2/100‑69 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGac     >  2:660525/1‑100 (MQ=255)
                                                                                                gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCAGGAAATGTCGGGGCGCTCTCCCAAGTGac     >  1:1557260/1‑100 (MQ=255)
                                                                                                 ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGGAAGAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGCAATGTCGGGGCGCTCTACCAAGTGac     >  1:1704092/1‑99 (MQ=255)
                                                                                                 ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatatcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgg      <  1:2058702‑M2/98‑68 (MQ=255)
                                                                                                 ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGaca    >  2:785336/1‑100 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatcc  <  2:119204‑M2/100‑72 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca  >  1:2375782/1‑100 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca  >  1:1109882/1‑100 (MQ=255)
                                                                                                   ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca  >  1:649022/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
CGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACA  >  NC_000913/2794036‑2794234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.