New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2794135NA (NA)14 (0.160) 9/168 NT NA noncoding (108/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 = 2794163 NA (NA)noncoding (136/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 132 total aligned reads displayed.

GGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794064‑2794262
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gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                                                     >  1:2530670‑M2/1‑100 (MQ=255)
gggATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGC                                                                                                     >  1:837882‑M2/1‑100 (MQ=255)
     ccAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaaaa                                                                                                <  2:726995/100‑1 (MQ=255)
      cAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               >  2:469886/1‑100 (MQ=255)
      cAGGTCGGATAAGGCGGTTACGCCGCAGCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAg                                                                                               <  2:1883579/100‑1 (MQ=255)
       aGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAAAAGGAAGAAATCTATGTTGGCCGGATAAGACGGAGCAGCTATCCGGCAAAAAGa                                                                                              >  1:2328056/1‑100 (MQ=38)
        ggTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGaa                                                                                             <  2:2254939/100‑1 (MQ=255)
         gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                                            <  2:2239449/100‑1 (MQ=255)
         gTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAAt                                                                                            <  2:1723924/100‑1 (MQ=255)
          tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  2:558947/100‑1 (MQ=255)
          tCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATc                                                                                           <  2:2090348/100‑1 (MQ=255)
            ggATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCaaacatagattt                                                                                         <  2:1762714‑M2/100‑13 (MQ=255)
             gATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAAt                                                                                        <  1:1857140/100‑1 (MQ=255)
              aTAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATa                                                                                       >  1:85072/1‑100 (MQ=255)
                aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                                                     <  1:720538/100‑1 (MQ=255)
                aaGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAAc                                                                                     <  2:527471/100‑1 (MQ=255)
                aaGGCGTTTAAGCCGCATCCGACAATCTGTACGTAAACAGGAAGCAATCTATGTTGGCCGGGTAAGGAGCAGCCGCTCTCCGGCAAAAAGAATCCATAAc                                                                                     >  1:891242/1‑100 (MQ=255)
                 aGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACa                                                                                    >  2:255411/1‑100 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                   >  1:170459/1‑100 (MQ=255)
                  ggCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACaa                                                                                   >  2:185544/1‑100 (MQ=255)
                   gCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAt                                                                                  <  1:525933/100‑1 (MQ=255)
                    cGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAAtt                                                                                 >  2:2045013/1‑100 (MQ=255)
                               cATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAc                                                                      <  2:1847314/100‑1 (MQ=255)
                                aTCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAcc                                                                     >  1:1463969/1‑100 (MQ=255)
                                 tCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                                                    <  2:2314215/100‑1 (MQ=255)
                                  ccGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGAccc                                                                    >  2:226379/1‑99 (MQ=255)
                                   cGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCgg                                                                  <  1:1047657/100‑1 (MQ=255)
                                       aaTCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGcgcg                                                              <  2:442765/100‑1 (MQ=255)
                                         tCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCggg                                                            <  2:1099643/100‑1 (MQ=255)
                                            gcaCGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGaaa                                                         >  2:2400608/3‑100 (MQ=255)
                                             tACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAAt                                                        <  2:694620/100‑1 (MQ=255)
                                                gTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgta                                                     <  2:2335187‑M2/100‑49 (MQ=255)
                                                  gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                   >  1:94302/1‑100 (MQ=255)
                                                  gAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgg                                                   <  2:125582/100‑1 (MQ=255)
                                                   aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCggg                                                  <  2:28404/100‑1 (MQ=255)
                                                   aaCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCg                                                    >  1:1904297/1‑98 (MQ=255)
                                                    aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 <  2:1809187/100‑1 (MQ=255)
                                                    aCAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCgggg                                                 <  2:1064074/100‑1 (MQ=255)
                                                     cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgc                                                <  2:473481‑M2/100‑54 (MQ=255)
                                                     cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                                >  2:802552/1‑100 (MQ=255)
                                                     cAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgc                                                >  2:2469722/1‑100 (MQ=255)
                                                      tggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcg                                               <  1:517722/99‑1 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTTTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              <  2:1773654/100‑1 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  1:1466059/1‑100 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  2:1880780/1‑100 (MQ=255)
                                                       ggAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGgcgc                                              >  1:131062/1‑100 (MQ=255)
                                                        gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                                             >  2:2306591/1‑100 (MQ=255)
                                                        gaagaaATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGct                                             >  2:628381/1‑100 (MQ=255)
                                                             aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc                                        <  2:2410652/100‑1 (MQ=255)
                                                             aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTccc                                        >  2:145276/1‑100 (MQ=255)
                                                             aaTCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTcc                                         >  2:2301493/1‑99 (MQ=255)
                                                               tCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgac                                      <  2:1599524‑M2/100‑64 (MQ=255)
                                                                cTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAg                                     >  2:672040/1‑100 (MQ=255)
                                                                 tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacct                                    <  1:1730342‑M2/100‑66 (MQ=255)
                                                                 tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt                                    >  2:876105/1‑100 (MQ=255)
                                                                 tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt                                    >  2:488575/1‑100 (MQ=255)
                                                                 tATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGt                                    <  1:1179500/100‑1 (MQ=255)
                                                                  aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctg                                   <  1:2858‑M2/100‑67 (MQ=255)
                                                                  aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   <  2:354890/100‑1 (MQ=255)
                                                                  aTGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTg                                   <  2:354818/100‑1 (MQ=255)
                                                                    tccgatctggtaaggcggAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga                                 >  1:1224755‑M2/9‑32 (MQ=255)
                                                                    gTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgga                                 <  1:2363157‑M2/100‑69 (MQ=255)
                                                                     ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGGAAGAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGCAATGTCGGGGCGCTCTACCAAGTGac                                 >  1:1704092/1‑99 (MQ=255)
                                                                     ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatatcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctgg                                  <  1:2058702‑M2/98‑68 (MQ=255)
                                                                     ttGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGaca                                >  2:785336/1‑100 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatcc                              <  2:119204‑M2/100‑72 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCcaacatagattacttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatcc                              <  1:1618776‑M2/100‑72 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCTGGGCGCTCTCCCAAGTGacaca                              <  1:1507327/100‑1 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca                              >  1:2375782/1‑100 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca                              >  1:1109882/1‑100 (MQ=255)
                                                                       ggCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacaca                              >  1:649022/1‑100 (MQ=255)
                                                                         ccGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGacacac                             >  1:1202415/1‑99 (MQ=255)
                                                                            ggTAAGGCGGAGCCGCTCTCCGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggaagatcgga                         <  2:1224759‑M2/100‑77 (MQ=255)
                                                                            ggTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTc                         >  1:103096/1‑100 (MQ=255)
                                                                            ggTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTc                         >  2:838772/1‑100 (MQ=255)
                                                                             gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  2:1476728/100‑1 (MQ=255)
                                                                             gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  2:1892560/100‑1 (MQ=255)
                                                                             gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  1:2215145/100‑1 (MQ=255)
                                                                             gTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCg                        <  2:1091432/100‑1 (MQ=255)
                                                                               aaGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgag                      <  1:1902357/100‑1 (MQ=255)
                                                                                aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCgaga                     >  2:1847583/1‑100 (MQ=255)
                                                                                aGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGATCTCCCAAGTGACACACTTTCgaga                     >  2:2398313/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATATCAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  2:91976/100‑1 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    >  2:2105143/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    <  1:122363/100‑1 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    >  1:2246687/1‑100 (MQ=255)
                                                                                 ggCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGagag                    >  2:1721900/1‑100 (MQ=255)
                                                                                       gCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCa              >  2:1596499/1‑100 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg            <  2:1419625/100‑1 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg            <  2:1419656/100‑1 (MQ=255)
                                                                                         cGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAgg            <  2:1692962/100‑1 (MQ=255)
                                                                                          gCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGa           <  1:1645084/100‑1 (MQ=255)
                                                                                             ctcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgn        <  1:1338797/100‑2 (MQ=255)
                                                                                             ctcCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgg        <  1:952415/100‑1 (MQ=255)
                                                                                               ccGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATgggg      >  1:1629188/1‑100 (MQ=255)
                                                                                                cGGCcaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagc     >  2:1561102‑M2/1‑4 (MQ=255)
                                                                                                cGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGc     <  2:67860/100‑1 (MQ=255)
                                                                                                   ccaacatagatttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtaggccggacaagacgcgcagcgtc  <  1:1336672‑M2/100‑100 (MQ=255)
                                                                                                   cAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCGGGATggg       <  1:2484601/95‑1 (MQ=255)
                                                                                                   cAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGATCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAat  <  1:2398298/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCTCCGGCAAAAAGAATCAATAACAATTATACGCGTGACCCGGCGCGGGAAATGTCGGGGCGCTCTCCCAAGTGACACACTTTCGAGAGGATTCAGGATGGGGCAAT  >  NC_000913/2794064‑2794262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.