New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4229380 =NA (NA)16 (0.190) 7/164 NT NA noncoding (5/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4229413 = NA (NA)noncoding (38/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 155 total aligned reads displayed.

GCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGG  >  NC_000913/4229281‑4229479
                                                                                                   |                                                                                                    
gcgcCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAgg                                                                                                      <  2:918835/100‑1 (MQ=255)
gcgcCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAgg                                                                                                      <  1:437005/100‑1 (MQ=255)
cttatgtgtttaaggctggtgaagaagcggttccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtg                                                                                                      <  2:2065459‑M1/1‑1 (MQ=255)
    cTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCt                                                                                                   <  1:1021392/99‑1 (MQ=255)
     tGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGa                                                                                                 >  2:305703/1‑100 (MQ=255)
     tGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGa                                                                                                 >  2:674110/1‑100 (MQ=255)
     tGAACTCGCTGGTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGGCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGa                                                                                                 <  1:204094/100‑1 (MQ=255)
       aaCTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGAt                                                                                                <  1:961548/99‑1 (MQ=255)
         cTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAg                                                                                             >  2:1055149/1‑100 (MQ=255)
           cGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAc                                                                                           >  1:876827/1‑100 (MQ=255)
            gCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcg                                                                                          >  1:1938366/1‑100 (MQ=255)
              tGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAcgcg                                                                                        <  1:2266283/100‑1 (MQ=255)
                   tGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAg                                                                                   >  1:1779248/1‑100 (MQ=255)
                    gTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGc                                                                                  >  1:2231373/1‑100 (MQ=255)
                       cGGTGGCTTACGGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                               >  1:2522029/1‑100 (MQ=255)
                       cGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTc                                                                               <  2:491688/100‑1 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATACGACGCGTCAAGCGTCg                                                                              >  1:1511097/1‑100 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                              >  1:2205314/1‑100 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                              <  1:1167130/100‑1 (MQ=255)
                        ggTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCg                                                                              >  2:1611798/1‑100 (MQ=255)
                             gttccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCa                                                                         >  2:692338‑M1/71‑100 (MQ=255)
                             cTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCa                                                                         >  2:85697/1‑100 (MQ=255)
                              ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAg                                                                        <  2:207242/100‑1 (MQ=255)
                              ttACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAg                                                                        <  2:2357012/100‑1 (MQ=255)
                                ccgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGc                                                                      >  1:1722081‑M1/68‑100 (MQ=255)
                                aCAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGc                                                                      >  1:2513959/1‑100 (MQ=255)
                                 cgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                     >  2:2351688‑M1/67‑100 (MQ=255)
                                 cgctggaagctggtcaccgtttttaagtgaagtgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAgg                                                                       >  1:633199‑M1/67‑98 (MQ=255)
                                  gctggaagctggtcaccgtttttaagtgcattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                    >  2:2240009‑M1/66‑100 (MQ=255)
                                  gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                    >  2:2357974‑M1/66‑100 (MQ=255)
                                  gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                    >  2:1888991‑M1/66‑100 (MQ=255)
                                  gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                    >  2:2225573‑M1/66‑100 (MQ=255)
                                   gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                   >  2:349608/1‑100 (MQ=255)
                                     gtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                 >  2:1314462/1‑100 (MQ=255)
                                     gtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                 >  2:417737/1‑100 (MQ=255)
                                      tgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATGCGACGCTTGACGCGTCTTATCAGGcctacag                                                                <  2:2143774/100‑7 (MQ=21)
                                      gaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                >  2:1483312‑M1/62‑100 (MQ=255)
                                      gaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                >  1:209831‑M1/62‑100 (MQ=255)
                                       aagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                               >  2:2571439‑M1/61‑100 (MQ=255)
                                        cTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                              >  1:2558960/1‑100 (MQ=255)
                                         tGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAc                                                             <  2:1673712/100‑1 (MQ=255)
                                             aCAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGa                                                         <  1:927389/100‑1 (MQ=255)
                                               aGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATg                                                       <  2:1651939/100‑1 (MQ=255)
                                                gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                      >  1:1609177/1‑100 (MQ=255)
                                                 ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                     <  2:817557/100‑1 (MQ=255)
                                                 ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                     <  1:2052076/100‑1 (MQ=255)
                                                   tgatgaagatgaaGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGAGTCAAGCGTCGCATCAGGCACTAGGAACAAGATGCCgg                                                   >  1:333856/2‑100 (MQ=255)
                                                      tgaagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATc                                               <  2:361731/100‑1 (MQ=255)
                                                         agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATg                                            <  2:454960/100‑1 (MQ=255)
                                                              aagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATgagatc                                       >  2:1093055/1‑95 (MQ=255)
                                                              aagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATcc                                       >  1:2169178/1‑100 (MQ=255)
                                                               agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAGCATGCATCCg                                      >  1:1257913/1‑100 (MQ=255)
                                                                 gacgggacgAGTATTAATATTGTGAATCCTGTAGGCGTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                    <  2:1822007/100‑1 (MQ=255)
                                                                 gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                    <  2:1462823/100‑1 (MQ=255)
                                                                 gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                    <  1:2380908/100‑1 (MQ=255)
                                                                   cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCat                                  <  1:2408153/100‑2 (MQ=25)
                                                                   cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGc                                    >  1:810267/1‑98 (MQ=255)
                                                                   cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATACGGCaa                                  <  1:565259/100‑1 (MQ=255)
                                                                    ggtacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatc                                 <  1:1532505/97‑3 (MQ=25)
                                                                    gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatc                                 <  1:1624151/100‑3 (MQ=25)
                                                                     ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatct                                <  1:295503/100‑4 (MQ=25)
                                                                     ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatct                                <  2:2476356/100‑4 (MQ=25)
                                                                      gacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAAGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatct                                <  1:1017582/99‑4 (MQ=25)
                                                                       atgAGTATTAATATTGTGAATACTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATTAACAAGATGCCGGATGCATGATCCGGCatct                                <  2:735888/96‑4 (MQ=21)
                                                                        cgAGTATTAATATTGTGAATCCTGTATGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATGATCCGGCatct                                <  1:415723/97‑4 (MQ=21)
                                                                        cgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCAc                             >  2:419223/1‑100 (MQ=255)
                                                                         gAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACt                            <  2:610496/100‑1 (MQ=255)
                                                                          aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACtt                           >  2:2204412/1‑100 (MQ=255)
                                                                          aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACtt                           <  1:1055027/100‑1 (MQ=255)
                                                                          aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACt                            <  1:1731143/99‑1 (MQ=255)
                                                                           gTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTa                          >  1:1077636/1‑100 (MQ=255)
                                                                             aTTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaa                        >  2:269600/1‑100 (MQ=255)
                                                                               tAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTaaaaa                      >  2:2335269/1‑100 (MQ=255)
                                                                                aaTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAAc                     <  2:653520/100‑1 (MQ=255)
                                                                                 atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACg                    <  1:529493/100‑1 (MQ=255)
                                                                                 atatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACg                    >  2:2031064/1‑100 (MQ=255)
                                                                                  tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                   >  1:188045/1‑100 (MQ=255)
                                                                                  tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACgg                   <  2:1294578/100‑1 (MQ=255)
                                                                                   atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                  >  2:2053530/1‑100 (MQ=255)
                                                                                   atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGt                  >  2:1023646/1‑100 (MQ=255)
                                                                                    ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTg                 <  2:1174053/100‑1 (MQ=255)
                                                                                    ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACGTAATAACGGTg                 <  1:1358629/100‑1 (MQ=255)
                                                                                     tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGa                >  1:1204245/1‑100 (MQ=255)
                                                                                     tgtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGa                <  1:377537/100‑1 (MQ=255)
                                                                                      gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTgcc               <  2:1757373/100‑3 (MQ=255)
                                                                                      gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGAc               >  2:1838854/1‑100 (MQ=255)
                                                                                        gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACGAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa             <  2:188046/100‑1 (MQ=255)
                                                                                        gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGCTCCTGCATCCGGCAATTCACTTAAAAACGGTGa                >  1:1771012/1‑97 (MQ=255)
                                                                                        gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa             >  1:1179237/1‑100 (MQ=255)
                                                                                        gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCa             <  1:2450302/100‑1 (MQ=255)
                                                                                         aaTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAg            <  2:1152656/100‑1 (MQ=255)
                                                                                          aTCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGc           <  2:876830/100‑1 (MQ=255)
                                                                                           tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCt          <  1:2204397/100‑1 (MQ=255)
                                                                                             cTGCAGGACTGATAAGACGCGACAAGCGTCGCACCATGCACTTTGAACAAGATGCCGGATCATGCATCCAGCAATTCACTTCAAAACGCTGACCAGCTTc        <  1:90111/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCa      >  2:2264830/1‑100 (MQ=255)
                                                                                                 aGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc    <  2:65097/100‑1 (MQ=255)
                                                                                                 aGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc    <  2:2508032/100‑1 (MQ=255)
                                                                                                  ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg   <  1:504246/100‑1 (MQ=255)
                                                                                                  ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg   <  1:2066874/100‑1 (MQ=255)
                                                                                                   GCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCgg  <  2:1590404‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
GCGCCTGAACTCGCTGTTTTGTTCGGTGGCTTACAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATCATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGG  >  NC_000913/4229281‑4229479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.