New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4229380 =NA (NA)16 (0.190) 7/164 NT NA noncoding (5/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4229413 = NA (NA)noncoding (38/70 nt) REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences REP312 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 167 total aligned reads displayed.

CAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAG  >  NC_000913/4229314‑4229511
                                                                                                   |                                                                                                   
cgctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                                                     >  2:2351688‑M1/67‑100 (MQ=255)
cAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCa                                                                                                     <  2:1774442/100‑1 (MQ=255)
 gctggaagctggtcaccgtttttaagtgcattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                                                    >  2:2240009‑M1/66‑100 (MQ=255)
 gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                                                    >  2:2357974‑M1/66‑100 (MQ=255)
 gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                                                    >  1:1986948‑M1/66‑100 (MQ=255)
 gctggaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCAc                                                                                                    >  2:2225573‑M1/66‑100 (MQ=255)
  gtgtGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACt                                                                                                   >  2:349608/1‑100 (MQ=255)
   tgtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTa                                                                                                  <  2:2489186/100‑1 (MQ=255)
    gtgCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTAt                                                                                                 >  2:417737/1‑100 (MQ=255)
     gaagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                >  1:209831‑M1/62‑100 (MQ=255)
      aagctggtcaccgtttttaagtgaattgccggatgcatgatccggcatcttgttcatagtGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGa                                                                                               >  2:2571439‑M1/61‑100 (MQ=255)
       cTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATg                                                                                                >  2:644971/1‑98 (MQ=255)
       cTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGaa                                                                                              >  1:2558960/1‑100 (MQ=255)
        tGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAAc                                                                                             <  2:1673712/100‑1 (MQ=255)
              aGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATg                                                                                       <  2:1651939/100‑1 (MQ=255)
               gCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGc                                                                                      >  1:1609177/1‑100 (MQ=255)
                ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                     <  2:817557/100‑1 (MQ=255)
                ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                     <  1:2210468/100‑1 (MQ=255)
                ccGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGcc                                                                                     <  1:2052076/100‑1 (MQ=255)
                 cGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCg                                                                                    >  2:694644/1‑100 (MQ=255)
                  tgatgaagatgaaGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGAGTCAAGCGTCGCATCAGGCACTAGGAACAAGATGCCgg                                                                                   >  1:333856/2‑100 (MQ=255)
                  ggATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCgg                                                                                   >  1:1756242/1‑100 (MQ=255)
                       aagatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CAt                                                                             >  2:529770/1‑100 (MQ=255)
                        gatctaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                            <  1:1093051/95‑1 (MQ=255)
                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                            <  2:1846634/100‑1 (MQ=255)
                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                            <  2:454960/100‑1 (MQ=255)
                        agatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATg                                                                            <  1:1180446/100‑1 (MQ=255)
                         gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCTGAT‑CATGc                                                                           >  2:381405/1‑100 (MQ=255)
                         gatgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGc                                                                           >  2:2028678/1‑100 (MQ=255)
                          atgaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCa                                                                          <  1:1673210/100‑1 (MQ=255)
                            gaagGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATc                                                                        >  2:1097105/1‑100 (MQ=255)
                              agGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAG‑CATGCATCCg                                                                      >  1:1257913/1‑100 (MQ=255)
                                gacgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGc                                                                    <  2:1462823/100‑1 (MQ=255)
                                  cgggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATACGGCaa                                                                  <  1:565259/100‑1 (MQ=255)
                                   ggtacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatc                                                                 <  1:1532505/97‑3 (MQ=25)
                                   gggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAAt                                                                 >  2:670124/1‑100 (MQ=255)
                                    ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                <  1:295503/100‑4 (MQ=25)
                                    ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                <  2:2574839/100‑4 (MQ=25)
                                    ggacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                <  2:2476356/100‑4 (MQ=25)
                                    ggacaAGTATTAATATTGTGAATCCTGAAGTCCTGGTAAGACGCGGCAAGCGTCGCATCAGGCACTAGGAACAAGATGCCGAATGCATG‑ATCCGGCa                                                                   <  1:2437894/97‑1 (MQ=21)
                                     gacgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGAAGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                <  1:1017582/99‑4 (MQ=25)
                                      acgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatcttg                                                              <  1:811977/100‑6 (MQ=25)
                                      acgAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCa                                                              >  1:50646/1‑100 (MQ=255)
                                       cgAGTATTAATATTGTGAATCCTGTATGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGATGCATG‑ATCCGGCatct                                                                <  1:415723/97‑4 (MQ=21)
                                         aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACtt                                                           >  2:2204412/1‑100 (MQ=255)
                                         aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACtt                                                           <  1:1055027/100‑1 (MQ=255)
                                         aGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACt                                                            <  1:1731143/99‑1 (MQ=255)
                                            aTTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTaaa                                                        >  2:269600/1‑100 (MQ=255)
                                               aaTATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAAc                                                     <  2:653520/100‑1 (MQ=255)
                                                 tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACgg                                                   <  2:1294578/100‑1 (MQ=255)
                                                 tatTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACgg                                                   >  1:188045/1‑100 (MQ=255)
                                                  atTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGt                                                  >  2:2053530/1‑100 (MQ=255)
                                                   ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTg                                                 <  2:2291238/100‑1 (MQ=255)
                                                   ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTg                                                 <  2:1174053/100‑1 (MQ=255)
                                                   ttGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACGTAATAACGGTg                                                 <  1:1358629/100‑1 (MQ=255)
                                                     gtgAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGAc                                               >  2:1838854/1‑100 (MQ=255)
                                                       gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACGAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                             <  2:188046/100‑1 (MQ=255)
                                                       gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGCT‑CCTGCATCCGGCAATTCACTTAAAAACGGTGa                                                >  1:1771012/1‑97 (MQ=255)
                                                       gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                             <  1:2450302/100‑1 (MQ=255)
                                                       gAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCa                                             >  1:1179237/1‑100 (MQ=255)
                                                          tCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCt                                          <  1:2204397/100‑1 (MQ=255)
                                                          tCCTGCAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCt                                          <  1:401875/100‑1 (MQ=255)
                                                            catagtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                        >  2:1483312‑M2/40‑100 (MQ=255)
                                                            catagtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTc                                        >  1:103257‑M2/40‑100 (MQ=255)
                                                                gtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                    >  2:1888991‑M2/36‑100 (MQ=255)
                                                                gtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                    >  2:828603‑M2/36‑100 (MQ=255)
                                                                gtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGc                                    >  1:1285272‑M2/36‑100 (MQ=255)
                                                                gtgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATGCACTTAAAAACGGTGACCAGCTTCCAGc                                    >  2:2240009‑M2/36‑100 (MQ=255)
                                                                 tgcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                   >  2:2351688‑M2/35‑100 (MQ=255)
                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                   <  1:504246/100‑1 (MQ=255)
                                                                 ggCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                   <  1:2066874/100‑1 (MQ=255)
                                                                  gcctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCg                                   >  1:922376‑M2/34‑99 (MQ=255)
                                                                  GCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCgg                                  <  2:1590404‑M1/100‑1 (MQ=255)
                                                                   cctgatgcgacgcttgacgcgtcttatcaggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCACTTCACTTAAAAACGGTGACCAGCTTCCAGCg                                   >  1:633199‑M2/33‑98 (MQ=255)
                                                                     TGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATACCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAc                               <  2:1442431‑M1/100‑1 (MQ=255)
                                                                      GATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAAcc                              <  1:722507‑M1/100‑1 (MQ=255)
                                                                       ATAAGACGCGTCAAGCTTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTTACTTAAAAACGGTGACCAGCTTCCAGCGGAACCg                             >  1:1026023‑M1/1‑100 (MQ=255)
                                                                        TAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                            >  2:767060‑M1/1‑100 (MQ=255)
                                                                        TAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGc                            <  2:945162‑M1/100‑1 (MQ=255)
                                                                           gACGCGTGAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCGCTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                         <  1:1390853/100‑1 (MQ=255)
                                                                           gACGCGTCAAGCGTCGCATCAGGCACTATGCACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAGACGGTGACCAGCTTCCAGCGGAACCGct                           <  1:914067/98‑1 (MQ=255)
                                                                           gACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                         >  2:1316083/1‑100 (MQ=255)
                                                                           gACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                         >  1:1655023/1‑100 (MQ=255)
                                                                           gACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttc                         >  1:2135069/1‑100 (MQ=255)
                                                                            aCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttct                        <  2:1511106/100‑1 (MQ=255)
                                                                            aCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttct                        <  1:1069492/100‑1 (MQ=255)
                                                                            aCGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGcttct                        <  2:1074640/100‑1 (MQ=255)
                                                                                gTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCAc                    >  2:421819/1‑100 (MQ=255)
                                                                                     gCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc               >  1:953849/1‑100 (MQ=255)
                                                                                     gCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc               >  1:2386691/1‑100 (MQ=255)
                                                                                     gCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGcc               >  1:1296460/1‑100 (MQ=255)
                                                                                      cGTCGCATCAGGCACTACGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCt              <  1:2118274/100‑1 (MQ=255)
                                                                                         cGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaa           <  2:1043285/100‑1 (MQ=255)
                                                                                          gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa          >  1:482549/1‑100 (MQ=255)
                                                                                          gCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTaaa          >  2:1217008/1‑100 (MQ=255)
                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac         <  1:2498152/100‑1 (MQ=255)
                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac         >  1:2278247/1‑100 (MQ=255)
                                                                                           cATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAac         >  1:1979517/1‑100 (MQ=255)
                                                                                            gcgagtcACTGTGAAAGAGAGGCCGGTG‑AATGCAGCCGGCAATTCACTTAAGAACGGTTACCAGCTTGCAGCGGAACCGCTTCTGCGCCTGCCTTaac          <  1:2033567/92‑2 (MQ=255)
                                                                                                ggcACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATa    <  2:2231388‑M2/97‑1 (MQ=255)
                                                                                                   |                                                                                                   
CAGTGTGCTGGAACAGCCGGATGAAGATGAAGGACGGGACGAGTATTAATATTGTGAATCCTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGGCACTATGAACAAGATGCCGGAT‑CATGCATCCGGCAATTCACTTAAAAACGGTGACCAGCTTCCAGCGGAACCGCTTCTTCACCAGCCTTAAACACATAAG  >  NC_000913/4229314‑4229511

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.