New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1735983 =NA (NA)6 (0.070) 4/166 NT NA noncoding (1/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 1736008 = NA (NA)noncoding (26/74 nt) REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences REP128 (repetitive extragenic palindromic) element; contains 2 REP sequences

TTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCT  >  NC_000913/1735909‑1736106
                                                                                                   |                                                                                                  
ttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGcc                                                                                                    >  1:1337875‑M1/75‑100 (MQ=255)
ttgctgacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGcc                                                                                                    >  2:1615254‑M1/75‑100 (MQ=255)
   tGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAc                                                                                                 <  1:2291294/100‑1 (MQ=255)
     ggCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAcgc                                                                                               >  2:2317021/1‑100 (MQ=255)
     gacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTAcgc                                                                                               >  2:1928165‑M1/70‑100 (MQ=255)
     gacaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTAcgc                                                                                               >  1:673948‑M1/70‑100 (MQ=255)
      gcgcTGATGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTAcgcg                                                                                              <  1:741645/100‑1 (MQ=255)
      acaacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTAcgcg                                                                                              >  1:311098‑M1/69‑100 (MQ=255)
       caacgtgcgatttatcttgccggatgcggcgagtgccttatccgacctacatcgatgatccgcgtagGCCTGAAGCGCTACGCTTATCAGGCCTACGCgg                                                                                             >  1:385498‑M1/68‑100 (MQ=255)
         cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGat                                                                                           >  2:1271579/1‑100 (MQ=255)
         cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGat                                                                                           <  1:860530/100‑1 (MQ=255)
         cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGat                                                                                           <  1:1552035/100‑1 (MQ=255)
         cTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAAGAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGat                                                                                           >  2:688359/1‑100 (MQ=255)
          tGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatc                                                                                          >  1:2128382/1‑100 (MQ=255)
           ggTGATCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatca                                                                                         >  1:1997430/1‑100 (MQ=255)
           ggTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCACATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatca                                                                                         >  1:52047/1‑100 (MQ=255)
           ggTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatca                                                                                         <  1:106297/100‑1 (MQ=255)
             tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                                                       >  1:720558/1‑100 (MQ=255)
             tGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                                                       <  1:163709/100‑1 (MQ=255)
              gAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGatcatc                                                                                       <  2:1966974/99‑1 (MQ=255)
              gAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCg                                                                                      <  2:164936/100‑1 (MQ=255)
              gAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCg                                                                                      <  2:2139433/100‑1 (MQ=255)
               aaCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGa                                                                                     <  1:758551/100‑1 (MQ=255)
                aCTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGAt                                                                                    <  2:541139/100‑1 (MQ=255)
                 ctaggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg                                                                                   <  2:1787732/97‑1 (MQ=255)
                 cTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATAGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATg                                                                                   <  1:225873/100‑1 (MQ=255)
                  tGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGt                                                                                  >  1:2587053/1‑100 (MQ=255)
                   gggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTa                                                                                 <  2:453109/100‑1 (MQ=255)
                   gggAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTa                                                                                 >  2:2349705/1‑100 (MQ=255)
                          cGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGa                                                                          <  2:2308364/100‑1 (MQ=255)
                            tAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATa                                                                        >  2:95907/1‑100 (MQ=255)
                            tAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATa                                                                        <  1:2489347/100‑1 (MQ=255)
                               cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                     >  1:1953030/1‑100 (MQ=255)
                               cGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAgg                                                                     >  2:2187871/1‑100 (MQ=255)
                                gAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGc                                                                    >  2:2507843/1‑100 (MQ=255)
                                gAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGc                                                                    <  1:1576476/100‑1 (MQ=255)
                                    aaTCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTc                                                                >  2:703881/1‑100 (MQ=255)
                                     agctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcg                                                               <  2:2008976/98‑1 (MQ=255)
                                       ctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgcc                                                             <  2:758225/100‑1 (MQ=255)
                                       ctcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgcc                                                             >  2:545654/1‑100 (MQ=255)
                                        tcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTcgccg                                                            >  2:2217198/1‑100 (MQ=255)
                                        tcGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGCCCTACGCGGATCATCGATGTAGGTCGGAGAAGGCACTcgccg                                                            <  2:1749282/100‑1 (MQ=255)
                                              cATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCg                                                      >  1:1249498/1‑100 (MQ=255)
                                               ataataACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCgg                                                     >  2:319193/1‑100 (MQ=255)
                                               ataataACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCgg                                                     <  2:778043/100‑1 (MQ=255)
                                                taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATTTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                    <  1:469361/100‑1 (MQ=255)
                                                taataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGc                                                    >  1:1970104/1‑100 (MQ=255)
                                                  ataaCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCaa                                                  <  1:2303865/100‑1 (MQ=255)
                                                     aCTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGAt                                               >  2:2345016/1‑100 (MQ=255)
                                                      cTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATa                                              <  2:1544620/100‑1 (MQ=255)
                                                          tGGCAAGTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAAt                                           <  1:2570096/99‑1 (MQ=255)
                                                           ggCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCg                                         <  1:1452516/100‑1 (MQ=255)
                                                             cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCa                                       <  2:1453686/100‑1 (MQ=255)
                                                             cAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCa                                       >  1:433456/1‑100 (MQ=255)
                                                              aaaTGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc                                      <  1:1647506/100‑1 (MQ=255)
                                                                aTGCAGTATTGCCTGAAGCGCTACGCTGATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCAc                                      <  1:40679/98‑1 (MQ=255)
                                                                aTGCAGCAGTGCCTGAAGCGCTACGCTGATCAGGCCTACGCGGACAATCGCTGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACg                                     <  1:613038/99‑1 (MQ=38)
                                                                 tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGCTAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGtt                                   >  1:528853/1‑100 (MQ=255)
                                                                 tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGtt                                   >  2:1137396/1‑100 (MQ=255)
                                                                 tGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGtt                                   >  1:927097/1‑100 (MQ=255)
                                                                  ccgcgtaggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTg                                  >  1:385498‑M2/34‑100 (MQ=255)
                                                                   cgcgtaggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGt                                 >  1:311098‑M2/33‑100 (MQ=255)
                                                                   cagcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGt                                 >  2:2242533/1‑100 (MQ=255)
                                                                    gcgtaggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTc                                >  1:673948‑M2/32‑100 (MQ=255)
                                                                    gcgtaggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTc                                >  2:1928165‑M2/32‑100 (MQ=255)
                                                                    agcaTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTc                                <  2:221731/100‑1 (MQ=255)
                                                                      caTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                              >  1:1856919/1‑100 (MQ=255)
                                                                      caTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                              <  2:975036/100‑1 (MQ=255)
                                                                       aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                             <  2:523105/100‑1 (MQ=255)
                                                                       aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                             <  2:1732460/100‑1 (MQ=255)
                                                                       aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGc                             <  1:2500584/100‑1 (MQ=255)
                                                                       aTTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGAGGTAGGTCGGATAAGGCACTGGCCGCATCCGGCAAGATAAATCGCACGTTGTCAg                              >  2:796957/1‑99 (MQ=255)
                                                                         ggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCaa                           >  1:1337875‑M2/27‑100 (MQ=255)
                                                                         ggcctgataagcgtagcgcttcaggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCaa                           >  2:1615254‑M2/27‑100 (MQ=255)
                                                                                 gcgcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACg                   <  2:997445/100‑1 (MQ=255)
                                                                                 gcgcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACg                   <  2:2206089/100‑1 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                 >  2:911633/1‑100 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                 >  2:140247/1‑100 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                 >  2:61323/1‑100 (MQ=255)
                                                                                   gcTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCa                 >  2:1233801/1‑100 (MQ=255)
                                                                                     tACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGa               >  2:1733512/1‑100 (MQ=255)
                                                                                       cGCTAATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCAGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg             <  2:608854/100‑1 (MQ=255)
                                                                                        gCTTATTAGGCCTAAGCGGATCATCGGTGTAGGTCGGAAAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAg             <  2:736677/99‑1 (MQ=255)
                                                                                            aTCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATACATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTa         >  1:107756/1‑99 (MQ=255)
                                                                                            aTCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTa         <  1:891384/99‑1 (MQ=255)
                                                                                            aTCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTAt        >  2:690027/1‑100 (MQ=255)
                                                                                            aTCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGAAACGCAGAAGGTTAt        >  2:2552658/1‑100 (MQ=255)
                                                                                              caggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATcc      <  1:61322‑M2/95‑1 (MQ=255)
                                                                                              caggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCAGCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATc       <  2:67483‑M2/94‑1 (MQ=255)
                                                                                                ggcCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCtt    >  2:173080‑M2/4‑100 (MQ=255)
                                                                                                  cCTACGTGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCt  <  1:1425166‑M2/99‑1 (MQ=255)
                                                                                                   |                                                                                                  
TTCTGGGCGCTGGTGAACTGGGAATTCGTAGCGAAAAATCTCGCTGCATAATAACTGATGGCAAATGCAGCATTGCCTGAAGCGCTACGCTTATCAGGCCTACGCGGATCATCGATGTAGGTCGGATAAGGCACTCGCCGCATCCGGCAAGATAAATCGCACGTTGTCAGCAACTGTAACGCAGAAGGTTATCCTTCT  >  NC_000913/1735909‑1736106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.