New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393131 =NA (NA)6 (0.070) 6/164 NT NA noncoding (1/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2393163 = NA (NA)noncoding (33/36 nt) REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences REP166 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 115 total aligned reads displayed.

AGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATG  >  NC_000913/2393064‑2393260
                                                                                                   |                                                                                                 
aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                                                                   <  2:169938/100‑1 (MQ=255)
 gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                                                                  >  1:2280768/1‑100 (MQ=255)
   cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                                                <  2:2334172/100‑1 (MQ=255)
   cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                                                                                >  2:371639/1‑100 (MQ=255)
    ccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACg                                                                                               >  2:507866/1‑100 (MQ=255)
     cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                                                                                              >  2:220194/1‑100 (MQ=255)
      gTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGtt                                                                                             >  2:888252/1‑100 (MQ=255)
        gatggtactgcgttgagttaaggattgtgggattgcccctgggcatataagaacgtagtGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                           >  2:1709028‑M1/60‑100 (MQ=255)
        cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                                                                           <  2:434354/100‑1 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAGTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         >  1:2310814/1‑100 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         <  2:1788661/100‑1 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         <  2:721942/100‑1 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         <  2:2296517/100‑1 (MQ=255)
          ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         <  2:1322199/100‑1 (MQ=255)
          gaaCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                                                                                         >  1:2180658/3‑100 (MQ=255)
               ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                                                                    <  1:216875/100‑1 (MQ=255)
                gATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                                                   >  1:1328598/1‑100 (MQ=255)
                gATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGcc                                                                                   >  2:1788077/1‑100 (MQ=255)
                  ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                                                 >  1:485894/1‑100 (MQ=255)
                  ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                                                 >  2:823876/1‑100 (MQ=255)
                  ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCa                                                                                 <  2:1618125/100‑1 (MQ=255)
                   tttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAg                                                                                >  1:373378/1‑100 (MQ=255)
                    ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                                                                               <  1:1643132/100‑1 (MQ=255)
                     tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                                                                              >  1:1603848/1‑100 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                             >  1:1035074/1‑100 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                             <  2:269167/100‑1 (MQ=255)
                      cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                             >  1:1921273/1‑100 (MQ=255)
                      cAACGAACTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                                                                             >  1:1234041/1‑100 (MQ=255)
                       aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                                                            <  2:2098380/100‑1 (MQ=255)
                       aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                                                            >  1:1347266/1‑100 (MQ=255)
                       aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                                                            <  1:520901/100‑1 (MQ=255)
                        aCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                                                                            >  1:895259/1‑99 (MQ=255)
                               gattgtgggattgcccctgggcatataagaacgtagGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                    >  1:902748‑M1/37‑100 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                                                                    >  2:1252377/1‑100 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCca                                                                     >  1:1759299/1‑99 (MQ=255)
                               ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTCTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGACAATCCcac                                                                    >  2:478627/1‑100 (MQ=255)
                                   gtgggattgcccctgggcatataagaacgtaggtcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATc                                                                >  1:902748‑M2/65‑100 (MQ=255)
                                    gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc                                                               >  1:1004468/1‑100 (MQ=255)
                                     aCAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCt                                                              >  2:20033/1‑100 (MQ=255)
                                       aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa                                                            <  1:507869/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  1:983497/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          >  2:844009/1‑100 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  2:1874818/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  2:1922472/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  2:1934309/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  2:2042276/100‑1 (MQ=255)
                                         aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGCTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc                                                          <  1:1659085/100‑1 (MQ=255)
                                              tctcTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc                                                     >  2:243666/1‑100 (MQ=255)
                                                tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc                                                   <  2:2060492/100‑1 (MQ=255)
                                                 ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCa                                                  >  2:270198/1‑100 (MQ=255)
                                                 ctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCa                                                  >  2:139514/1‑100 (MQ=255)
                                                   tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                <  2:1328592/100‑1 (MQ=255)
                                                   tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                >  1:413192/1‑100 (MQ=255)
                                                   tCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGt                                                <  1:1203719/100‑1 (MQ=255)
                                                      gACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTAcc                                             >  1:2072788/1‑100 (MQ=255)
                                                       aCTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCa                                            <  2:1742834/100‑1 (MQ=255)
                                                        cTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCAt                                           >  1:1987700/1‑100 (MQ=255)
                                                         tGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc                                          <  1:1277668/100‑1 (MQ=255)
                                                         agaacgtaggtcggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATc                                          >  2:1709028‑M2/43‑100 (MQ=255)
                                                          gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCTCACAATCCTTAACTCAACGCAGTACCATCa                                         >  1:1405684/1‑100 (MQ=255)
                                                          gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa                                         >  2:1850447/1‑100 (MQ=255)
                                                          gggggTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCa                                         >  1:1505377/1‑100 (MQ=255)
                                                                aGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg                                   <  2:1386987/100‑1 (MQ=255)
                                                                aGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTg                                   >  1:85755/1‑100 (MQ=255)
                                                                 gtgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGc                                  <  2:509684/100‑1 (MQ=255)
                                                                  tgtCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGcc                                 <  2:1703873/100‑1 (MQ=255)
                                                                    tcggataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAg                               <  2:902744‑M2/69‑1 (MQ=255)
                                                                    tcggataagccgccttcgcggtgcatccgacCTACGATCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAg                               >  2:1062793‑M2/32‑100 (MQ=255)
                                                                     ggataagccgccttcgcggtgcatccgacaCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGc                              >  2:770650‑M2/31‑100 (MQ=255)
                                                                     CGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGc                              >  2:1294342‑M1/1‑100 (MQ=255)
                                                                      GGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                             >  2:1318317‑M1/1‑100 (MQ=255)
                                                                      GGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGca                             <  2:1028021‑M1/100‑1 (MQ=255)
                                                                       gataagccgccttcgcggtgcatccgacCTACGTTCTTATATGCCCAGGGGCAATCCCCCAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcac                            >  1:296140‑M2/29‑100 (MQ=255)
                                                                       gATGCACCGCGAAGGCGGCTTATCCGCCCTACGTTCTTATATGCCCAGGGGCAATCCTACAATCCTTAACTCAACGCAGTACCCTCAACAGTGCCAGcac                            <  2:1812950/100‑1 (MQ=255)
                                                                        ATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacc                           >  1:1654118‑M1/1‑100 (MQ=255)
                                                                         TGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcacca                          <  1:1035218‑M1/100‑1 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                         >  1:1097741/1‑100 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                         >  1:1252283/1‑100 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGcaccac                         >  2:1319042/1‑100 (MQ=255)
                                                                          gCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACGCAACGCAGTACCATCAACAGTGCCAGcaccac                         <  1:810770/100‑1 (MQ=255)
                                                                           cACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACg                        >  1:14393/1‑100 (MQ=255)
                                                                             ccGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCGATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAc                      >  1:1204023/1‑100 (MQ=255)
                                                                             ccGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAc                      >  1:829186/1‑100 (MQ=255)
                                                                              cgcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                     <  1:270199/100‑1 (MQ=255)
                                                                              cgcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                     <  2:1023609/100‑1 (MQ=255)
                                                                              cgcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGAcc                     >  2:1845137/1‑100 (MQ=255)
                                                                               gcgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCg                    <  2:1032895/100‑1 (MQ=255)
                                                                                cgAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGc                   <  2:1000568/100‑1 (MQ=255)
                                                                                    ggcggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCg               <  2:2310793/100‑1 (MQ=255)
                                                                                    ggcggcTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCg               <  2:1277244/100‑1 (MQ=255)
                                                                                        ccgatctcgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGc           <  2:1421101‑M2/89‑1 (MQ=255)
                                                                                          ttATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTc         <  2:1035069/100‑1 (MQ=255)
                                                                                            atccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCTAGCACCACGACCGCAACGATGCTCAt       >  2:2079785‑M2/8‑100 (MQ=255)
                                                                                             tccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATg      <  2:1683489‑M2/94‑1 (MQ=255)
                                                                                             tccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATg      >  2:183694‑M2/7‑100 (MQ=255)
                                                                                             tcagacTTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATg      >  2:515085‑M2/7‑100 (MQ=255)
                                                                                              ccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCTTCAACAGTGCCAGCACCACGACCGCACCGATGCTCATgg     >  2:1655700‑M2/6‑100 (MQ=255)
                                                                                              ccgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATgg     >  2:282521‑M2/6‑100 (MQ=255)
                                                                                               cgacCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCaccgatgcagatcgg    >  1:1421109‑M2/5‑93 (MQ=255)
                                                                                                gacCTACGTTCTTATATGCCCAGGGGCAATCCCACACTCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGAt   >  2:597805‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                 
AGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGCAGTACCATCAACAGTGCCAGCACCACGACCGCACCGATGCTCATGGATG  >  NC_000913/2393064‑2393260

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.