| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 5565 = | NA (NA) | 11 (0.110) | 5/164 | NT | NA | noncoding (1/105 nt) | RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 2430980 | NA (NA) | noncoding (52/84 nt) | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 170 total aligned reads displayed.
GCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCAT > NC_000913/5466‑5664 | ttcaacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagg < 1:423728‑M1/1‑1 (MQ=255)ttcaacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagg > 1:1753978‑M1/100‑100 (MQ=255)gcCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACCTCCCCGCTAAATGACACCTGCCGGGTCACAATCCGGCATTCAgcg < 1:2553066/100‑1 (MQ=255) tcaacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGc < 2:201628‑M1/2‑1 (MQ=255) caccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGcc < 1:1898035/100‑1 (MQ=255) caacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGcc > 2:2301259‑M1/98‑100 (MQ=255) caacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGcc < 1:2808656‑M1/3‑1 (MQ=255) caacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGcc < 2:762457‑M1/3‑1 (MQ=255) caacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGcc < 1:1342483‑M1/3‑1 (MQ=255) caacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGcc > 2:1523163‑M1/98‑100 (MQ=255) accgTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGACAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCt < 1:2904987/100‑1 (MQ=255) aacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCt < 1:2938169‑M1/4‑1 (MQ=255) aacgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCt > 2:1415219‑M1/97‑100 (MQ=255) gcgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTg > 2:1503148‑M1/96‑100 (MQ=255) ccaTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTg > 2:1150899/1‑100 (MQ=255) cgccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGa > 2:845370‑M1/95‑100 (MQ=255) gccatcgactttttatgcctttgcggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGAt > 1:1799191‑M1/94‑100 (MQ=255) gccatcgacttgttatgcctttgcgggatcgggcaatgcgagtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGAt > 1:2449929‑M1/94‑100 (MQ=255) aTAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGAt > 1:2733901/1‑100 (MQ=255) catcgactttttatgccttggcggcatcgggcaattcgtggcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGAt > 1:595915‑M1/92‑98 (MQ=255) aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGc < 2:3005011/100‑1 (MQ=255) aaGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGc < 1:903179/100‑1 (MQ=255) aGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCg < 2:487951/100‑1 (MQ=255) aaGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACg < 2:1361007/100‑1 (MQ=255) cctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgc > 1:347768/1‑100 (MQ=255) ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcg < 1:2629513/100‑1 (MQ=255) ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcg > 2:2760988/1‑100 (MQ=255) ctcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAACCCGGCATTCAGCGCCTGATGCGGCGCTGgcg > 1:4832/1‑100 (MQ=255) tcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgc < 2:247112/100‑1 (MQ=255) tcATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGgcgc < 2:2861011/100‑1 (MQ=255) cATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGcgcg > 1:20960/1‑100 (MQ=255) tGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTc < 1:581291/100‑1 (MQ=255) tGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTc < 2:1879123/100‑1 (MQ=255) gATCATCTCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTc < 2:2826356/99‑1 (MQ=255) tcatcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTa < 1:831024/100‑1 (MQ=255) catcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTAt < 1:2961785/100‑1 (MQ=255) catcaCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTAt > 2:2991938/1‑100 (MQ=255) cggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAg > 1:1647778‑M1/71‑100 (MQ=255) ggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAgg > 2:2375828‑M1/70‑100 (MQ=255) ggcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAgg > 2:2710387‑M1/70‑100 (MQ=255) aCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAgg < 2:863905/100‑1 (MQ=255) aCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAgg < 2:2359124/100‑1 (MQ=255) aCGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAgg > 2:2760750/1‑100 (MQ=255) gcatcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGc > 2:2136331‑M1/69‑100 (MQ=255) ggcggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc < 2:2923241/100‑1 (MQ=255) ggcggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc < 1:773660/100‑1 (MQ=255) catcgggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc > 2:1041092‑M1/68‑100 (MQ=255) ggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCttc < 2:2063766/100‑3 (MQ=255) ggTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACACTGGCGCGTCTTATCAGGCCTAc > 2:2803473/1‑100 (MQ=255) gggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCtan > 1:2529033‑M1/64‑98 (MQ=255) gggcaatgcgtgtcggatgcggcgtaaacgccttatccgacctacggttctacccctgcgtagGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACg > 2:313715‑M1/64‑100 (MQ=255) gTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACg > 1:1707427/1‑100 (MQ=255) gTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACg < 2:664047/100‑1 (MQ=255) cATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGtt > 1:2079760/1‑100 (MQ=255) tCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTc < 1:882508/100‑1 (MQ=255) ccAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCt > 2:1578421/1‑100 (MQ=255) ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATTCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa < 1:1281419/100‑1 (MQ=255) ggCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa > 2:1663751/1‑100 (MQ=255) gacAAACATCACCGATAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCa > 1:129887/3‑100 (MQ=255) gCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCaa < 1:2405519/100‑1 (MQ=255) tCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg > 1:392177/1‑100 (MQ=255) tCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTg > 1:392083/1‑100 (MQ=255) aCCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGaa > 1:1171108/1‑100 (MQ=255) ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt > 1:1235989/1‑100 (MQ=255) ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt < 2:543889/100‑1 (MQ=255) ccGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAAt > 1:836904/1‑100 (MQ=255) tAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTAATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTg < 1:2142176/99‑1 (MQ=255) aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa > 1:645835/1‑100 (MQ=255) aaaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCa > 1:1391863/1‑100 (MQ=255) naTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCAt > 1:1135069/2‑100 (MQ=255) aaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCAt < 1:1448593/100‑1 (MQ=255) aaTGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCAt < 2:1924595/100‑1 (MQ=255) aCAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCtt > 2:625732/1‑100 (MQ=255) cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt > 1:1466506/1‑100 (MQ=255) cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt > 2:470303/1‑100 (MQ=255) cAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGAGGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCttt > 2:2157734/1‑100 (MQ=255) aTGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGt > 1:205426/1‑100 (MQ=255) tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTa < 1:478747/100‑1 (MQ=255) tGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTa < 1:1043505/100‑1 (MQ=255) gCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCCGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAg < 1:266345/100‑1 (MQ=255) ccGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAgg > 2:923808/1‑100 (MQ=255) ccGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGACTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAg > 2:1351817/1‑99 (MQ=255) cGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc > 2:776305/1‑100 (MQ=255) cGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGc < 1:225244/100‑1 (MQ=255) ggTAACAATCCGGCATTCAGCGCCTGATGCGACTCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAg > 1:1844474/1‑100 (MQ=255) ggTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAg > 2:3035304/1‑100 (MQ=255) aCAATCCGGCATGCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATa < 1:2731361/100‑1 (MQ=255) aTCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAgg > 1:1997475/1‑100 (MQ=255) aTCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAgg > 1:1678165/1‑100 (MQ=255) tCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGc > 1:1759310/1‑100 (MQ=255) cGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGt > 1:1664872/1‑100 (MQ=255) gacATGCAGTGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTACGTTAATACTGCAATATATTGATGCTGCATGCTTTTGTAGGCAGGATAAGCCgat < 1:913637/98‑3 (MQ=21) gCATTCGGCGTCTGATGCGACGCTGGGGCGTCTGATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTc < 1:629511/100‑1 (MQ=21) gCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTc < 1:1044184/100‑1 (MQ=255) aTTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAc < 1:2225220/100‑1 (MQ=255) ttCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg < 1:2473940/100‑1 (MQ=255) ttCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcg > 1:1056575/1‑100 (MQ=255) cAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgcc < 2:1642315/100‑1 (MQ=255) aGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCAcgccg > 1:2306201/1‑100 (MQ=255) GCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCAt < 2:1784794‑M1/100‑1 (MQ=255) | GCCACCATAAGAAAGCTCCTCATGATCATCACGGCGGTCATGGTCCAGGCAAACATCACCGCTAAATGACAAATGCCGGGTAACAATCCGGCATTCAGCGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACGTTAATTCTGCAATATATTGAATCTGCATGCTTTTGTAGGCAGGATAAGGCGTTCACGCCGCAT > NC_000913/5466‑5664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |