BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	5565 =	NA (NA)	11 (0.110)	5/164	NT	NA	noncoding (1/105 nt)	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP1 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 2430980	NA (NA)	11 (0.110)	5/164	NT	NA	noncoding (52/84 nt)	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 141 total aligned reads displayed.

ATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACT  >  NC_000913/2430881‑2431077

atTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCCGCGTAAACGCCTTATCCGACCTACGGTTTTACCCCTGCGTAg                                                                                                   <  2:2068324/100‑1 (MQ=255)

 ttCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGg                                                                                                  >  1:1753978‑M2/1‑99 (MQ=255)

  tCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgc                                                                                                 <  1:2308098‑M2/100‑3 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                <  1:2808656‑M2/100‑4 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                <  1:1321273‑M2/100‑4 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                <  1:1342483‑M2/100‑4 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                >  2:1523163‑M2/1‑97 (MQ=255)

   cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                >  2:2301259‑M2/1‑97 (MQ=255)

    aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcct                                                                                               <  1:2938169‑M2/100‑5 (MQ=255)

    aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcct                                                                                               >  2:1415219‑M2/1‑96 (MQ=255)

    aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                >  1:1103769‑M2/1‑96 (MQ=255)

      cGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctga                                                                                             >  2:845370‑M2/1‑94 (MQ=255)

       gCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgat                                                                                            >  1:1799191‑M2/1‑93 (MQ=255)

         cATCGACTTTTTATGCCTTGGCGGCATCGGGCAATTCGTGGCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgat                                                                                            >  1:595915‑M2/1‑91 (MQ=255)

           tCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGa                                                                                        <  2:2413189/100‑1 (MQ=255)

           tCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGa                                                                                        >  2:1449910/1‑100 (MQ=255)

              aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAcgc                                                                                     >  1:671221/1‑100 (MQ=255)

               cTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAcgcg                                                                                    <  2:2678021/100‑1 (MQ=255)

                tttttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACgcgc                                                                                   <  1:2672671/100‑1 (MQ=255)

                 ttttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGcc                                                                                  >  1:1596697/1‑100 (MQ=255)

                      tGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGt                                                                             >  2:2422038/1‑100 (MQ=255)

                       gCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTc                                                                            <  1:619952/100‑1 (MQ=255)

                        ccTTTTCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  1:639984/100‑1 (MQ=255)

                        ccTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  2:1780227/100‑1 (MQ=255)

                        ccTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  1:1367465/100‑1 (MQ=255)

                        ccTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCg                                                                           <  1:277113/100‑1 (MQ=255)

                         cTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGc                                                                          >  2:823828/1‑100 (MQ=255)

                         cTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGc                                                                          >  1:398178/1‑100 (MQ=255)

                             gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCa                                                                      >  2:751256/1‑100 (MQ=255)

                             gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCa                                                                      <  1:1478038/100‑1 (MQ=255)

                              cGGCATCGGTCAATGCGTGTCGGGTGCGGCGTAAACGCCCTTGCCGACCTACGGTTCTACCCCTGCGTATGCTTGATAAGACACGCCAGCGTCGCATc                                                                       >  1:2133498/1‑98 (MQ=37)

                               ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGGCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAgg                                                                    <  2:1788782/100‑1 (MQ=255)

                               ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcagg                                                                    >  2:2710387‑M2/1‑69 (MQ=255)

                                gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggc                                                                   >  2:2136331‑M2/1‑68 (MQ=255)

                                gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggc                                                                   >  2:859727‑M2/1‑68 (MQ=255)

                                gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTAGCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGc                                                                   <  2:2496985/100‑1 (MQ=255)

                                  aTCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCCGCGTCGCATCAGGc                                                                   >  2:2662279/1‑98 (MQ=255)

                                    cGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGa                                                               >  1:399990/1‑100 (MQ=255)

                                     gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTCTCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                              >  1:409293/1‑100 (MQ=255)

                                     gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctan                                                               >  1:2529033‑M2/1‑63 (MQ=255)

                                     gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcctacg                                                              >  2:313715‑M2/1‑63 (MQ=255)

                                       gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCg                                                            >  1:2637239/1‑100 (MQ=255)

                                       gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCg                                                            <  2:1037544/100‑1 (MQ=255)

                                       gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTAACCCTGCGTAGGCCTCATAAGACGCGCCAGCGTCGCATCAGGCAAGACCg                                                            >  1:1671682/1‑100 (MQ=255)

                                         aaTGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTa                                                          <  2:718572/100‑1 (MQ=255)

                                           tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                        <  1:152700/100‑1 (MQ=255)

                                             cGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTaa                                                      <  1:2348367/100‑1 (MQ=255)

                                             cGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTaa                                                      <  1:1537275/100‑1 (MQ=255)

                                               tgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAtt                                                    <  2:1477897/100‑1 (MQ=255)

                                                gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                   >  2:2485606/1‑100 (MQ=255)

                                                 tCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                  >  1:434071/1‑100 (MQ=255)

                                                 tCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCg                                                  <  2:1320015/100‑1 (MQ=255)

                                                 tCGGATAAGGCGTTTACGCCGCATCCGACCTATGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCAGCAGGCAAGACCGTAGTAAtcgg                                                  >  1:2853866/1‑97 (MQ=21)

                                                  cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                 >  2:1590147/1‑100 (MQ=255)

                                                   ggATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGc                                                >  1:457634/1‑100 (MQ=255)

                                                   ggATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGCCAAGACCGTATTAATTCgcc                                                >  1:1959969/1‑98 (MQ=255)

                                                    gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGcc                                               <  1:2902368/100‑2 (MQ=255)

                                                    gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                               <  1:1748210/100‑1 (MQ=255)

                                                    gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                               <  1:2126312/100‑1 (MQ=255)

                                                     aTGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGt                                              <  2:2342623/100‑1 (MQ=255)

                                                      tGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                             <  1:209432/100‑1 (MQ=255)

                                                      tGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGta                                             >  1:739858/1‑100 (MQ=255)

                                                        cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtatn                                           <  2:1479805/100‑2 (MQ=255)

                                                        cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                           >  2:2181895/1‑100 (MQ=255)

                                                          gcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                         <  2:1080598/100‑1 (MQ=255)

                                                           cgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGc                                         >  2:39930/1‑99 (MQ=255)

                                                            gTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGccc                                       <  1:1922181/100‑1 (MQ=255)

                                                              aaaCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCAt                                     <  1:1132736/100‑1 (MQ=255)

                                                              aaaCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCAt                                     >  1:2651602/1‑100 (MQ=255)

                                                                aCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTa                                   <  2:254635/100‑1 (MQ=255)

                                                                 cGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAc                                  <  1:3051043/100‑1 (MQ=255)

                                                                 cGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAc                                  >  1:1296599/1‑100 (MQ=255)

                                                                   ccTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCa                                <  1:182652/100‑1 (MQ=255)

                                                                   ccTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCa                                >  2:646681/1‑100 (MQ=255)

                                                                   ccTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCa                                >  2:617141/1‑100 (MQ=255)

                                                                     ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAcc                                 <  2:1751681/97‑1 (MQ=255)

                                                                     ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCAc                               >  2:2019061/1‑99 (MQ=255)

                                                                     ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACg                              >  1:1451328/1‑100 (MQ=255)

                                                                        tCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCa                           >  2:634657/1‑100 (MQ=255)

                                                                         ccGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCAc                          >  2:2950563/1‑100 (MQ=255)

                                                                            aCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTa                       >  2:106298/1‑100 (MQ=255)

                                                                            aCCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTa                       <  1:823823/100‑1 (MQ=255)

                                                                              cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                     <  2:741514/100‑1 (MQ=255)

                                                                              cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                     <  2:264302/100‑1 (MQ=255)

                                                                               tACGGTTCTACCCCTGCGTAGGCTTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTa                       <  2:1029051/97‑1 (MQ=255)

                                                                               tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                    <  1:239341/100‑1 (MQ=255)

                                                                               tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                    <  1:1590139/100‑1 (MQ=255)

                                                                               tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                    >  1:1845296/1‑100 (MQ=255)

                                                                                aCGGTTCTCCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGcc                   <  1:1136014/100‑1 (MQ=255)

                                                                                aCGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGcc                   <  1:456496/100‑1 (MQ=255)

                                                                                         ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg          >  1:2440756/1‑100 (MQ=255)

                                                                                         ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg          <  2:1029726/100‑1 (MQ=255)

                                                                                         ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg          <  1:2470897/100‑1 (MQ=255)

                                                                                          cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGc         <  2:2127198/100‑1 (MQ=255)

                                                                                           ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCt        <  2:2981805/100‑1 (MQ=255)

                                                                                           ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCt        <  2:2527238/100‑1 (MQ=255)

                                                                                             tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc      <  1:832899/100‑1 (MQ=255)

                                                                                             tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc      <  1:1546214/100‑1 (MQ=255)

                                                                                                gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc   <  2:809409/100‑1 (MQ=255)

                                                                                                 tAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACt  <  1:1245584/100‑1 (MQ=255)

ATTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACT  >  NC_000913/2430881‑2431077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.