New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2597686 =NA (NA)8 (0.080) 5/166 NT NA noncoding (14/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2597714 = NA (NA)noncoding (42/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 164 total aligned reads displayed.

CATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGATG  >  NC_000913/2597616‑2597813
                                                                                                  |                                                                                                   
cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                    <  2:973252/100‑1 (MQ=255)
cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                    <  1:2619204/100‑1 (MQ=255)
aaacgtgtgcgtctgcaggaaaacgcgattttagcggtaattcgcacgaaatttgtttgtcggacgtagtTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                    >  2:2224970‑M1/71‑100 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   <  2:2328324/100‑1 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   >  1:1933550/1‑100 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   <  1:2183685/100‑1 (MQ=255)
  tCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTa                                                                                                  <  2:302873/100‑1 (MQ=255)
  tCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTa                                                                                                  >  1:2246012/1‑100 (MQ=255)
  tCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTGTGGCGGATGCGGCGTTAACGCCTTATCCGGACt                                                                                                   >  1:2859521/1‑99 (MQ=39)
  acgtgtgcgtctgcaggaaaacgcgattttagcggtaattcgcacgaaatttgtttgtcggacgtagtTCGGATGCGGCGTGAACGCCTTATCCGAACTa                                                                                                  >  1:2602945‑M1/69‑100 (MQ=255)
   cgtgtgcgtctgcaggaaaacgcgattttagcggtaattcgcacgaaatttgtttgtcggacgtagtTCGGATGCGGCGTGAACGCCTTATCCGAACTAc                                                                                                 >  1:2039543‑M1/68‑100 (MQ=255)
    tttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACg                                                                                                >  1:571857/1‑100 (MQ=255)
     ttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGt                                                                                               >  1:2248340/1‑100 (MQ=255)
      tATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTc                                                                                              >  2:1482206/1‑100 (MQ=255)
      tATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTc                                                                                              >  1:2805332/1‑100 (MQ=255)
        tCACTGCTTGGTGTGAATTAACGTTTTAAAATCGTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCg                                                                                            <  1:904544/100‑1 (MQ=255)
        tCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCg                                                                                            <  2:348806/100‑1 (MQ=255)
        tCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCg                                                                                            <  1:3000437/100‑1 (MQ=255)
         cACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGa                                                                                           >  1:1025124/1‑100 (MQ=255)
          tcttcTGGGTGTGAATTACCGTTTTAATGTCTTTTGCTGTCTGGTGTGCCTTCTGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGac                                                                                          <  1:2882303/96‑1 (MQ=25)
          aCTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGac                                                                                          >  2:162420/1‑100 (MQ=255)
           cTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGaca                                                                                         >  2:2776402/1‑100 (MQ=255)
            tCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaa                                                                                        <  1:769562/100‑1 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                      >  1:870949/1‑100 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                      <  2:411327/100‑1 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                      <  2:2627011/100‑1 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCAGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACATCCGacaaac                                                                                      >  1:2164493/1‑100 (MQ=255)
                gggTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAGCTACGTCCGacaaacaa                                                                                    >  1:37098/1‑100 (MQ=255)
                gggTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaacaa                                                                                    >  2:259879/1‑100 (MQ=255)
                  gtgtGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAAt                                                                                  >  2:1984159/1‑100 (MQ=255)
                  gtgtGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAAt                                                                                  <  1:746533/100‑1 (MQ=255)
                      gAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCg                                                                              >  2:300179/1‑100 (MQ=255)
                      gAATTAACGTTTTAAAATCTTTTCGTGTCTGGTGTGCCGGATGTTTTGTCTGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCg                                                                              <  1:366051/100‑1 (MQ=255)
                        aTTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTg                                                                            >  2:2753833/1‑100 (MQ=255)
                         ttAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGc                                                                           >  1:2252887/1‑100 (MQ=255)
                           aaCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGa                                                                         >  2:2694312/1‑100 (MQ=255)
                            aCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGaa                                                                        >  2:95462/1‑100 (MQ=255)
                                 ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTAGACGGAAGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                   >  1:902095/1‑100 (MQ=255)
                                  tAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCg                                                                  >  1:17549/1‑100 (MQ=255)
                                     aaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTa                                                               >  2:2878082/1‑100 (MQ=255)
                                      aTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTaa                                                              <  2:1474467/100‑1 (MQ=255)
                                         ttttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAt                                                           >  2:1797820/1‑100 (MQ=255)
                                         ttttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAt                                                           >  2:1955608/1‑100 (MQ=255)
                                           ttGCTGTCGGGTGTGCCGGATTTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAGCGCTAAAATcg                                                         <  1:608615/100‑1 (MQ=255)
                                            tGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgc                                                        >  2:1391414/1‑100 (MQ=255)
                                             gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                       >  2:323166/1‑100 (MQ=255)
                                              cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                      >  1:1055213/1‑100 (MQ=255)
                                              cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                      <  2:840481/100‑1 (MQ=255)
                                               tGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGtt                                                     <  2:461686/100‑1 (MQ=255)
                                                gTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGttt                                                    <  1:2271415/100‑1 (MQ=255)
                                                gTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGttt                                                    <  2:2791459/100‑1 (MQ=255)
                                                   tGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTcc                                                 <  1:1409525/100‑1 (MQ=255)
                                                    ggTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCt                                                <  2:1902155/100‑1 (MQ=255)
                                                    ggTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCt                                                >  2:227167/1‑100 (MQ=255)
                                                      tgtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACACACAAATTTCGCGCGAATTACCGCTAAAATCGCGTTTTCCttc                                              <  2:2065184/100‑3 (MQ=255)
                                                         gCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGa                                           >  1:433125/1‑100 (MQ=255)
                                                         gCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCACGTTTTCCTGCAGa                                           >  2:1281496/1‑100 (MQ=255)
                                                           cGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACg                                         <  2:2465895/100‑1 (MQ=255)
                                                                  tttGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGt                                  >  2:1833594/1‑100 (MQ=255)
                                                                      TCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGc                              >  1:1400996‑M1/1‑100 (MQ=255)
                                                                      TCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGc                              >  1:601331‑M1/1‑100 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACGAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                             >  2:1095074‑M1/1‑100 (MQ=255)
                                                                       CGGATGCAGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                             >  1:2402904‑M1/1‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  2:362866‑M2/27‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  1:2335563‑M2/27‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCCCGTTTTCCTGCAGACGCACACGTTTGc                              >  1:2705684‑M2/27‑98 (MQ=255)
                                                                         GATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTa                           >  2:256489‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATc                         >  2:347722‑M1/1‑100 (MQ=255)
                                                                           TGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAACTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATc                         >  1:1703914‑M1/1‑100 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatca                        >  2:1393766/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcat                       >  2:832052/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcat                       <  1:2943236/100‑1 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcat                       <  2:1565/100‑1 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcata                      <  1:1570082/100‑1 (MQ=255)
                                                                                cgTGACCGCCTTATCCGAACTACGTCCGACAAACAAATTTCCTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcatatc                    <  2:902100/100‑1 (MQ=255)
                                                                                cgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcatatc                    <  1:1650598/100‑1 (MQ=255)
                                                                                 gTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcatatca                   <  1:2814986/100‑1 (MQ=255)
                                                                                 gTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcatatca                   <  2:244153/100‑1 (MQ=255)
                                                                                   gAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGa                 >  2:1199667/1‑100 (MQ=255)
                                                                                   gAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGa                 >  1:784490/1‑100 (MQ=255)
                                                                                    aaCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaa                >  1:1354971/1‑100 (MQ=255)
                                                                                     acgccgtatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa               >  1:1209666‑M2/14‑100 (MQ=255)
                                                                                     aCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa               >  2:2135649/1‑100 (MQ=255)
                                                                                     aCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa               <  2:2270261/100‑1 (MQ=255)
                                                                                     aCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaa               >  2:686321/1‑100 (MQ=255)
                                                                                      cGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaaa              >  2:291975/1‑100 (MQ=255)
                                                                                        ncTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaaaca            >  1:1444896/2‑98 (MQ=255)
                                                                                        ccTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaaaaa            >  2:773966/1‑100 (MQ=255)
                                                                                        ccTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaaaaa            >  2:2813541/1‑100 (MQ=255)
                                                                                         cTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAg           >  2:359783/1‑100 (MQ=255)
                                                                                          ttATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAgg          <  2:2489471/100‑1 (MQ=255)
                                                                                          ttATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAgg          <  2:1655506/100‑1 (MQ=255)
                                                                                          ttATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAgg          <  2:1842304/100‑1 (MQ=255)
                                                                                           tATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAggg         >  2:933640/1‑100 (MQ=255)
                                                                                            acgagAACTACGGACGACAATCAAATATCGTGGTATTTACCGCTAAAATCTCGTATTCATGAAGACGCACATGTTTGCGTATCATATCAGaaaaaa            <  1:1906232/92‑1 (MQ=255)
                                                                                              ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCg      <  1:1243858‑M2/96‑1 (MQ=255)
                                                                                               cgaACTACGTCGGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTGTCCTGCAGACGGACACGTTTGCGTATCATATCAGAAAAAAGGGCCgg     >  1:537071‑M2/4‑100 (MQ=255)
                                                                                               cgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCgg     >  2:30933‑M2/4‑100 (MQ=255)
                                                                                                 aACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGAt   <  1:1520528‑M2/99‑1 (MQ=255)
                                                                                                  aCTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGgatg  <  2:1156531/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGATG  >  NC_000913/2597616‑2597813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.