| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4168637 | 37 (0.360) | 17 (0.170) | 5/170 | NT | 32.5% | intergenic (+190/‑4) | gltT/rrlB | tRNA‑Glu/23S ribosomal RNA of rrnB operon |
| ? | NC_000913 | = 4210001 | NA (NA) | intergenic (+152/‑42) | gltV/rrlE | tRNA‑Glu/23S ribosomal RNA of rrnE operon | |||||
CTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4168535‑4168637‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCG < NC_000913/4210001‑4209903 CTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGG < 1:72838/100‑1CTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGG < 1:2532485/100‑1 TGGAGCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGT < 2:2772928/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTG < 1:1162838/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTG < 2:1250699/100‑1 GATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTG > 1:311644/1‑100 TCTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAAT > 1:2675683/1‑100 CTCAAATTTTCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGTGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATT > 2:184988/1‑100 TCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTT > 1:1155956/1‑100 TCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTT > 2:590515/1‑100 CAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTT > 2:1975767/1‑100 TCGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTG > 1:775720/1‑100 CGCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGA > 1:1852968/1‑100 CGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGA > 1:1717893/1‑100 CGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGA > 2:1453123/1‑100 CGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGA > 2:1600544/1‑100 GCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGAT > 1:752588/1‑100 GCAACACGATGATGGATCGCAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACATTCATGGTTCAGTGTTTCAATTTTCAGCTTGA > 2:1988123/1‑99 GCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGACAATTAGAGAGACTCACGAACAACTCTCGGTGTTCAGTGTTTCAATTTTCAGCCTGA > 1:2693066/1‑99 GCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGAT > 1:850373/1‑100 GCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGAT > 2:2238527/1‑100 AATCGAAAGAAACATCATCGTGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAG > 1:830115/1‑100 CTTCGGGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAA < 1:1600540/100‑1 GTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCAC > 1:1266814/1‑100 gTGCGAAAATTTGAGTGACTCACGAACAACTTTCGTTGTTCAGTGTGTCAATTTTCAGCTTGATCCAGATGTTGAAAGAGCAAATAGCTCAAACATCACC < 1:570012/99‑1 TTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACC < 1:86611/100‑1 TTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACC < 2:2614731/100‑1 TTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACC < 1:1881732/100‑1 TGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCC > 1:1674714/1‑100 TGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCC > 2:2664235/1‑100 GCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCG > 2:744826/1‑100 GCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTAAGTGTTTCAATTTTGAGCTTGATACAGATTTTTGAAGAGAAAATATCTCAAACATCcagag > 1:2026953/1‑95 CTGGATCAAGCTGAAAATTGAAACACTGAACAACGAGAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGAAAGAAACATCTTCGGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4168535‑4168637‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttgCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAATATCTCAAACATCACCCG < NC_000913/4210001‑4209903 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |