New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 416863737 (0.360)17 (0.170) 5/170 NT 32.5% intergenic (+190/‑4) gltT/rrlB tRNA‑Glu/23S ribosomal RNA of rrnB operon
?NC_000913 = 4210001 NA (NA)intergenic (+152/‑42) gltV/rrlE tRNA‑Glu/23S ribosomal RNA of rrnE operon

Only 100 of 103 total aligned reads displayed.

TGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACG  >  NC_000913/4209923‑4210100
                                                                              |                                                                                                   
tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTaa                                                                                >  1:621851/1‑100 (MQ=32)
tGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTaa                                                                                <  2:763329/100‑1 (MQ=32)
 gCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAg                                                                               <  2:2552122/100‑1 (MQ=32)
  ctctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGa                                                                              >  2:1143233/1‑100 (MQ=33)
    ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaaa                                                                            >  2:1900874/1‑100 (MQ=33)
    ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaaa                                                                            >  1:2325391/1‑100 (MQ=33)
    ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaaa                                                                            >  1:638910/1‑100 (MQ=33)
    ctTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGaaa                                                                            >  2:807169/1‑100 (MQ=33)
      ttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACa                                                                          >  1:1846665/1‑100 (MQ=32)
      ttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACa                                                                          <  1:2069530/100‑1 (MQ=33)
      ttAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACa                                                                          <  2:861066/100‑1 (MQ=33)
       tAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAt                                                                         >  2:1031216/1‑100 (MQ=33)
       tAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAt                                                                         >  2:475470/1‑100 (MQ=33)
       tAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAt                                                                         >  1:348650/1‑100 (MQ=33)
        aaaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATc                                                                        >  2:2529615/1‑100 (MQ=33)
        aaaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATc                                                                        <  1:622846/100‑1 (MQ=33)
         aaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATc                                                                        >  1:2863412/1‑99 (MQ=32)
         aaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCt                                                                       >  2:2341951/1‑100 (MQ=32)
         aaaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCt                                                                       >  2:951989/1‑100 (MQ=33)
          aaaTCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCtt                                                                      >  1:2341899/1‑100 (MQ=32)
             tCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCgg                                                                   <  2:349401/100‑1 (MQ=33)
               tGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGt                                                                 <  2:1242225/100‑1 (MQ=32)
                  aTCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTtgt                                                              >  1:1348192/1‑100 (MQ=32)
                  aTCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTtgt                                                              >  2:628899/1‑100 (MQ=32)
                  aTCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTtgt                                                              >  2:441509/1‑100 (MQ=33)
                    cAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGa                                                            <  2:2852799/100‑1 (MQ=33)
                    cAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGa                                                            <  2:589884/100‑1 (MQ=33)
                    cAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGa                                                            <  1:2569473/100‑1 (MQ=33)
                     aaGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAg                                                           <  1:1138136/100‑1 (MQ=33)
                     aaGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAg                                                           >  2:1654910/1‑100 (MQ=33)
                      aGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAgg                                                          >  2:2133361/1‑100 (MQ=33)
                       gCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGt                                                         <  2:78644/100‑1 (MQ=33)
                       gCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGt                                                         >  1:2315129/1‑100 (MQ=33)
                       gCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGt                                                         <  2:826969/100‑1 (MQ=33)
                       gCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGt                                                         >  2:1126961/1‑100 (MQ=33)
                        cTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGtt                                                        >  1:1440000/1‑100 (MQ=33)
                           aaaaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAg                                                     <  2:1313207/100‑1 (MQ=33)
                            aaaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGc                                                    >  2:2287605/1‑100 (MQ=33)
                             aaTTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAACTTCGGGTTGTGAGGTTAAGCg                                                   <  1:527849/100‑1 (MQ=18)
                               ttGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACAACTTCGGGTTGTGCGGTTAAgtg                                                   <  1:1433028/98‑3 (MQ=255)
                                tGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACt                                                >  2:2604691/1‑100 (MQ=33)
                                tGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACt                                                <  2:1197040/100‑1 (MQ=33)
                                tGAAACACTCAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGAc                                                 >  2:121465/1‑99 (MQ=17)
                                 gAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa                                               <  2:1628616/100‑1 (MQ=32)
                                 gAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa                                               <  2:1628757/100‑1 (MQ=33)
                                 gAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTa                                               <  1:217933/100‑1 (MQ=33)
                                  aaaCACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTaa                                              <  2:377943/100‑1 (MQ=33)
                                   aaCACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAg                                             <  2:2158839/100‑1 (MQ=33)
                                     cacTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg                                           <  1:2276293/100‑1 (MQ=33)
                                     cacTGAACAACGAAAGGTGTTCGTGAGTCTCTCAAATTTTTGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCg                                           <  1:1837217/100‑1 (MQ=16)
                                      acTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGt                                          >  1:2826047/1‑100 (MQ=33)
                                       cTGAACAACGAAAGTTGTTCGTGAGTGTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGAGTa                                         >  1:2680746/1‑100 (MQ=12)
                                       cTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa                                         >  2:2171337/1‑100 (MQ=33)
                                       cTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa                                         <  1:2217166/100‑1 (MQ=32)
                                       cTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa                                         >  2:2846640/1‑100 (MQ=33)
                                       cTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTa                                         >  2:2028822/1‑100 (MQ=33)
                                        tGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTac                                        <  1:299078/100‑1 (MQ=33)
                                        tGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTac                                        >  1:1165689/1‑100 (MQ=32)
                                         gAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca                                       >  1:612855/1‑100 (MQ=33)
                                         gAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTaca                                       >  2:1810551/1‑100 (MQ=33)
                                           acaacGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGGTGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACg                                     <  1:1861195/100‑1 (MQ=18)
                                            caacGATAGTTGTTCGTGAGACTCAAAAATTTTCGCAACCCGATGATGAATCGTAAGAAACATCTTTGGGTTGAGAGGTTAAACGACTAAGCGTACACg                                     >  1:1867750/1‑99 (MQ=11)
                                             aacGAAAGTTGTTAGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAAAATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGt                                   >  1:2119591/1‑100 (MQ=12)
                                               cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 >  2:781721/1‑100 (MQ=33)
                                               cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 >  2:779209/1‑100 (MQ=33)
                                               cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 >  1:50056/1‑100 (MQ=33)
                                               cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 <  2:1643438/100‑1 (MQ=33)
                                               cGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGACGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTgg                                 <  2:2789709/100‑1 (MQ=18)
                                                  aaGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATg                              <  2:1846673/100‑1 (MQ=32)
                                                   aGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGc                             >  1:2200580/1‑100 (MQ=33)
                                                    gttgttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTACGCGACTAAGCGTACACGGCGGATGcc                            <  1:576630/100‑1 (MQ=12)
                                                    gttgttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGcc                            >  1:798394/1‑100 (MQ=33)
                                                      tgttCGTGAGTCTCTCAAATTTACGCAACACCATGATTAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCt                          <  1:1957588/100‑1 (MQ=255)
                                                       gttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTg                         <  1:2696514/100‑1 (MQ=32)
                                                        ttCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTg                         >  1:2301958/1‑99 (MQ=33)
                                                         tCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGATTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGc                       >  1:1859613/1‑100 (MQ=17)
                                                          cGTGGGTCTATCAAATTTTCGCGACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGc                       <  1:694188/99‑1 (MQ=255)
                                                           gTGAGTCTCTCAAATTTTCGGAACACGATGATGAATCGTAAGGAAGATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  1:451643/100‑1 (MQ=255)
                                                           gTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  1:1696183/100‑1 (MQ=32)
                                                           gTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAg                     <  1:987774/100‑1 (MQ=33)
                                                              aGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCa                  <  2:1842406/100‑1 (MQ=32)
                                                               gTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCag                 <  1:2830523/100‑1 (MQ=33)
                                                                 ctctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCagag               >  2:2776242/1‑100 (MQ=33)
                                                                 ctctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCagag               >  2:2520492/1‑100 (MQ=32)
                                                                 ctctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCagag               >  2:1452707/1‑100 (MQ=33)
                                                                  tctcAAATTTTCGCAACCCGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGTTTAAGCGAGTAAGCGTATACGGTGGATGCCATGGCAggta                  >  1:2542436/1‑93 (MQ=11)
                                                                  tctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAgg              <  2:1458884/100‑1 (MQ=32)
                                                                   ctcACATGTTCGCAACACGATGATGAATCGTAATAAACATCTTCGAGTTTTGAGGTGAAGCAACTAAGCGTACACGGTGTATGCCCTGGCAGTCAGAgg              >  1:240952/1‑99 (MQ=11)
                                                                   ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGc             <  1:1892901/100‑1 (MQ=33)
                                                                   ctcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGc             <  1:1971827/100‑1 (MQ=32)
                                                                    tcAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCg            >  1:1360783/1‑100 (MQ=33)
                                                                       aaTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATg         >  2:1920584/1‑100 (MQ=32)
                                                                        aTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGa        <  2:178861/100‑1 (MQ=32)
                                                                        aTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGa        >  2:1697453/1‑100 (MQ=33)
                                                                        aTTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGa        >  1:956115/1‑100 (MQ=33)
                                                                         ttttCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGaa       <  2:621852/100‑1 (MQ=33)
                                                                         ttttCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGaa       <  1:2191191/100‑1 (MQ=33)
                                                                          tttCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAg      <  2:854066/100‑1 (MQ=33)
                                                                           ttCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAgg     >  2:1296223/1‑100 (MQ=33)
                                                                              gCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACg  <  2:90872/100‑1 (MQ=33)
                                                                              |                                                                                                   
TGCTCTTTAAAAATCTGGATCAAGCTGAAAATTGAAACACTGAACAACGAAAGTTGTTCGTGAGTCTCTCAAATTTTCGCAACACGATGATGAATCGTAAGAAACATCTTCGGGTTGTGAGGTTAAGCGACTAAGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACG  >  NC_000913/4209923‑4210100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.