BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1165696 =	NA (NA)	6 (0.070)	5/156	NT	NA	intergenic (+11/‑389)	ycfP/ndh	putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase
*	?	NC_000913	1165728 =	NA (NA)	6 (0.070)	5/156	NT	NA	intergenic (+43/‑357)	ycfP/ndh	putative UPF0227 family esterase/respiratory NADH dehydrogenase 2/cupric reductase

Only 100 of 130 total aligned reads displayed.

AGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATG  >  NC_000913/1165597‑1165794

tgcagggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagc                                                                                                    >  2:134553‑M1/100‑100 (MQ=255)

tgcagggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagc                                                                                                    <  2:2651391‑M1/1‑1 (MQ=255)

tgcagggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacacacagaattcggagc                                                                                                    >  2:1750212‑M1/100‑100 (MQ=255)

tgcagggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcgacgcgggcgccttatccgagctacagagtttggagc                                                                                                    <  2:590046‑M1/1‑1 (MQ=255)

agaTTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCtcgtc                                                                                                    >  1:1024468/1‑100 (MQ=255)

agaTTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCtcgtc                                                                                                    <  2:2009346/100‑1 (MQ=255)

agaTTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCtcgtc                                                                                                    >  2:2610473/1‑100 (MQ=255)

  cagtgcgttcggtaggcctgataagaagcgcatcaggcattgatgctngactgtcggatgcggcgtggacgccttatccgacccacagaattcggagcn                                                                                                   >  1:1057566‑M1/98‑98 (MQ=255)

  cagggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagcgc                                                                                                  <  1:569702‑M1/3‑1 (MQ=255)

   ttGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCa                                                                                                 <  1:2037759/100‑1 (MQ=255)

   agggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCa                                                                                                 >  1:1377855‑M1/97‑100 (MQ=255)

   agggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCa                                                                                                 <  2:1156064‑M1/4‑1 (MQ=255)

   agggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCa                                                                                                 >  1:2472802‑M1/97‑100 (MQ=255)

   aaggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCa                                                                                                 <  1:1787095‑M1/4‑1 (MQ=255)

    gggcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCAt                                                                                                <  1:461069‑M1/5‑1 (MQ=255)

      tCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCa                                                                                              <  2:1412652/100‑1 (MQ=255)

      tCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCa                                                                                              >  1:1769484/1‑100 (MQ=255)

      gcgttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCa                                                                                              <  1:571826‑M1/7‑1 (MQ=255)

        gttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAgg                                                                                            <  2:1286441‑M1/9‑1 (MQ=255)

        gttcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAgg                                                                                            <  1:361194‑M1/9‑1 (MQ=255)

         tggACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGt                                                                                           <  2:364060/99‑1 (MQ=255)

         gggACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGt                                                                                           >  2:569698/1‑100 (MQ=255)

          tcggtaggcctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTa                                                                                          >  2:1132646‑M1/90‑100 (MQ=255)

          ggACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTa                                                                                          >  2:1709847/1‑100 (MQ=255)

          ggACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTa                                                                                          >  1:364062/1‑100 (MQ=255)

           gACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTaa                                                                                         >  1:1688584/1‑100 (MQ=255)

           gACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTaa                                                                                         >  1:344781/1‑100 (MQ=255)

            aCGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTacc                                                                                        <  2:1403171/100‑3 (MQ=255)

             cGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAAcc                                                                                       >  1:2549217/1‑100 (MQ=255)

               aaGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCtt                                                                                     >  2:979964/1‑100 (MQ=255)

                agagCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTg                                                                                    >  2:2448762/1‑100 (MQ=255)

                 ncctgataagaagcgcatcaggcattgatgctcgactgtcggatgcggagtggacgccttatccgacccacagaattcggatCGCatccggtagcagcaa                                                                                   <  2:710642‑M1/18‑8 (MQ=255)

                  agCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGcc                                                                                  <  2:1701800/100‑1 (MQ=255)

                      gACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTa                                                                              <  1:1808568/100‑1 (MQ=255)

                       aCGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTAc                                                                             <  2:131680/100‑1 (MQ=255)

                        cGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTAcc                                                                            <  2:1898372/100‑1 (MQ=255)

                        cGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTAcc                                                                            <  1:1757978/100‑1 (MQ=255)

                          cacaAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTg                                                                          >  2:277997/1‑100 (MQ=255)

                          cacaAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTg                                                                          >  2:2229876/1‑100 (MQ=255)

                           acaAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGa                                                                         >  1:2349324/1‑100 (MQ=255)

                              cgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTAACCTTGCCGGTACCTGATgc                                                                      >  1:1004106‑M1/70‑100 (MQ=255)

                              cgcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTAACCTTGCCGGTACCTGATgc                                                                      >  1:908437‑M1/70‑100 (MQ=255)

                               gcatcaggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCATGTAACCTTGCCGGTACCTGATg                                                                       >  2:316019‑M1/69‑98 (MQ=255)

                               aTTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATgcg                                                                     <  2:2330413/100‑1 (MQ=255)

                                 tCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCt                                                                   >  2:2083185/1‑100 (MQ=255)

                                  cAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTc                                                                  >  1:1156074/1‑100 (MQ=255)

                                   caggcattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTcc                                                                 >  1:2602099‑M1/65‑100 (MQ=255)

                                   aaGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTcn                                                                 <  2:238859/100‑2 (MQ=255)

                                   aaGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTcc                                                                 <  1:1521029/100‑1 (MQ=255)

                                   aaGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTcc                                                                 >  2:801321/1‑100 (MQ=255)

                                       cattgatgctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAAt                                                             >  2:1367738‑M1/61‑100 (MQ=255)

                                       atatCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAAt                                                             >  2:2001120/1‑100 (MQ=255)

                                        tatCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAAtt                                                            <  1:88716/100‑1 (MQ=255)

                                          tctcCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCt                                                          >  2:1061398/1‑100 (MQ=255)

                                          tctcCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCt                                                          >  2:1914032/1‑100 (MQ=255)

                                          tctcCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCt                                                          <  2:2551398/100‑1 (MQ=255)

                                          tctcCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCt                                                          >  2:2563699/1‑100 (MQ=255)

                                           ctcCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCtg                                                         <  2:2372467/100‑1 (MQ=255)

                                              gctcgactgtcggatgcggcgtggacgccttatccgacccacagaattcggagCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTgg                                                      >  1:2394820‑M1/54‑100 (MQ=255)

                                               ccGCATTTACAGCGCATTAAAGCGGTCAAAACCCTAGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTgg                                                      <  2:2278132/99‑1 (MQ=255)

                                                  cATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCg                                                  >  2:165002/1‑100 (MQ=255)

                                                    tttACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGa                                                <  1:965591/100‑1 (MQ=255)

                                                     ttACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGAt                                               <  1:2229903/100‑1 (MQ=255)

                                                      tACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATa                                              <  1:1480824/100‑1 (MQ=255)

                                                       aCAGCGCATTAAAGCGTTGAAAACCCTTGGGCAAATGCCCTCGTGGCATCAGGTAACCTTGCGGGTACCTGATGCGCGCCGAATTCtg                                                         <  2:1693102/88‑1 (MQ=255)

                                                       aCAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATaa                                             >  2:2158769/1‑100 (MQ=255)

                                                          gcgcATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGc                                          >  2:1222938/1‑100 (MQ=255)

                                                          gcgcATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGc                                          >  1:2651423/1‑100 (MQ=255)

                                                             cATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGCCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTc                                       >  2:1415635/1‑100 (MQ=255)

                                                              aTTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCATGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTcc                                      <  2:567802/100‑1 (MQ=255)

                                                                tAAAGCGTTCAAAACCCTCGGGTAAATGCTCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAc                                    <  1:687921/100‑1 (MQ=255)

                                                                 aaaGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCAAcg                                   >  2:1873501/1‑100 (MQ=255)

                                                                  aaGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgc                                  >  1:2575760/1‑100 (MQ=255)

                                                                  aaGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgc                                  >  2:1311005/1‑100 (MQ=255)

                                                                  aaGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgc                                  >  1:1479515/1‑100 (MQ=255)

                                                                   aGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCAGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgc                                  >  1:2092083/1‑99 (MQ=255)

                                                                    gCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgccg                                <  2:2349294/100‑1 (MQ=255)

                                                                    gCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgccg                                <  2:970550/100‑1 (MQ=255)

                                                                     cGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgccgc                               >  1:2411426/1‑100 (MQ=255)

                                                                     cGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCAcgccgc                               <  1:1249248/100‑1 (MQ=255)

                                                                       ttCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGATAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCAt                             >  1:1875342/1‑100 (MQ=255)

                                                                        tCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATc                            >  1:1104087/1‑100 (MQ=255)

                                                                         cAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATcc                           <  2:1531442/100‑1 (MQ=255)

                                                                          aaaaCCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATACGCTCCGAATTCTGTGAGTCGGATAAGGCGTCCACGCCGCATACg                          >  1:877435/1‑100 (MQ=255)

                                                                              cccTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAg                      >  2:2133967/1‑100 (MQ=255)

                                                                              cccTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATACTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAg                      >  1:2113890/1‑100 (MQ=255)

                                                                               ccTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGt                     >  1:2307358/1‑100 (MQ=255)

                                                                                  cGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGa                  >  1:872440/1‑100 (MQ=255)

                                                                                  cGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGa                  <  1:1275138/100‑1 (MQ=255)

                                                                                   gggTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAg                 <  2:972837/100‑1 (MQ=255)

                                                                                   gggTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAg                 >  1:2062255/1‑100 (MQ=255)

                                                                                    ggTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTCTGGATCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGc                >  2:1306774/1‑100 (MQ=255)

                                                                                      tAAATGGCCTCGTCTCATCTGTTAACGTTGCTGTTACCTGATGCGCTTCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGc                <  1:2141202/98‑1 (MQ=37)

                                                                                       aaaTGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATc             <  2:1950005/100‑1 (MQ=255)

                                                                                        aaTGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCa            <  2:2011775/100‑1 (MQ=255)

                                                                                          tGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAAt          >  2:1684154/1‑100 (MQ=255)

                                                                                                 gtcgCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGAt   <  1:1125935/100‑1 (MQ=255)

                                                                                                 gtcgCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGACGACCACGCCGCATCCGACAGTAGAGCATCAATGCCTGAt   >  1:1109699/1‑100 (MQ=255)

                                                                                                  tcgCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATg  <  2:344779/100‑1 (MQ=255)

                                                                                                  tcgCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCAGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATg  <  2:1688568/100‑1 (MQ=255)

AGATTGTCTGGGACGAAGAGCAGACGCACAAATTCAAGAATATCTCCCCGCATTTACAGCGCATTAAAGCGTTCAAAACCCTCGGGTAAATGCCCTCGTCGCATCAGGTAACCTTGCCGGTACCTGATGCGCTCCGAATTCTGTGGGTCGGATAAGGCGTCCACGCCGCATCCGACAGTCGAGCATCAATGCCTGATG  >  NC_000913/1165597‑1165794

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.