New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1534913 =NA (NA)4 (0.040) 3/164 NT NA noncoding (31/75 nt) REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3674381 = NA (NA)noncoding (1/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 102 total aligned reads displayed.

ATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGCC  >  NC_000913/1534814‑1535012
                                                                                                   |                                                                                                   
aTGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                                                     <  1:608670/100‑1 (MQ=25)
 ttatagccggatgcgatgctggcgcatcttatccggcctacggggagccaggccgaataaaatcgtatgccggatgcggcgtaaacgccttatccggcAt                                                                                                    >  2:2008229‑M1/99‑100 (MQ=255)
   aGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                                  >  2:2350544/1‑100 (MQ=255)
   aGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                                  >  1:1911219/1‑100 (MQ=255)
   aGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATAc                                                                                                  >  2:224305/1‑100 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACa                                                                                                 <  1:1929737/100‑1 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACa                                                                                                 >  2:1645051/1‑100 (MQ=255)
    gTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACa                                                                                                 >  1:1906368/1‑100 (MQ=255)
      tAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACAtt                                                                                               <  1:2263833/100‑1 (MQ=255)
       aGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATAAGGCGTTTACGCCGCATCCGGCaacctgac                                                                                              <  2:721851/100‑8 (MQ=21)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAg                                                                                             <  1:1137677/100‑1 (MQ=255)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAg                                                                                             <  2:742482/100‑1 (MQ=255)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAg                                                                                             >  1:2575457/1‑100 (MQ=255)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGAATGCGGCGTAAACGCCTTATCCGGCATACATTAg                                                                                             >  1:82878/1‑100 (MQ=255)
        gcgcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTAAAATTGACGGATGAGACGTAAACGCCTTATCCGGCATACATTa                                                                                              >  1:2015845/1‑99 (MQ=38)
          gcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGcc                                                                                           >  2:874451/1‑100 (MQ=255)
          gcTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGcc                                                                                           >  1:1030766/1‑100 (MQ=255)
            tGGTTATGGCGGCGTTTGATACGCACCCGGAGGTGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGccc                                                                                          <  1:108367/99‑1 (MQ=255)
             ggTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCgg                                                                                        >  2:1536105/1‑100 (MQ=255)
             ggTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCgg                                                                                        >  2:1497819/1‑100 (MQ=255)
             ggTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCgg                                                                                        >  2:400810/1‑100 (MQ=255)
               tGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGt                                                                                       <  1:490686/99‑1 (MQ=255)
                gATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTg                                                                                     <  2:721810/100‑1 (MQ=255)
                gATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTg                                                                                     >  1:842661/1‑100 (MQ=255)
                 ntGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAAAGCCTTATCCGGCATACATTAGCCCGGTTg                                                                                     >  2:1179025/2‑99 (MQ=255)
                  tGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTa                                                                                   >  2:379053/1‑100 (MQ=255)
                   ggcggcGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAg                                                                                  >  1:505987/1‑100 (MQ=255)
                      ggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcc                                                                               <  1:550856/100‑1 (MQ=255)
                      ggcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcc                                                                               <  2:330212/100‑1 (MQ=255)
                       gcgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCt                                                                              <  2:2235201/100‑1 (MQ=255)
                        cgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTg                                                                             <  1:1640638/100‑1 (MQ=255)
                        cgTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTg                                                                             <  2:1347835/100‑1 (MQ=255)
                         gTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGAcat                                                                              <  1:1800973/98‑3 (MQ=255)
                              aTACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGc                                                                       <  1:1603533/100‑1 (MQ=255)
                                 cGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGaa                                                                    >  1:755431/1‑100 (MQ=255)
                                 cGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGaa                                                                    >  1:134387/1‑100 (MQ=255)
                                 cGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGaa                                                                    <  1:2521634/100‑1 (MQ=255)
                                  gCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAg                                                                   <  1:2350574/100‑1 (MQ=255)
                                   cACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgc                                                                  >  1:2054287/1‑100 (MQ=255)
                                    aCCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgcg                                                                 >  1:246427/1‑100 (MQ=255)
                                     cccGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgcgc                                                                >  2:1733092/1‑100 (MQ=255)
                                     cccGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgcgc                                                                >  2:1340949/1‑100 (MQ=255)
                                     cccGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAgcg                                                                 >  2:2462463/1‑99 (MQ=255)
                                         gAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCa                                                            <  2:1789600/100‑1 (MQ=255)
                                           ggCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGa                                                          >  2:1203800/1‑100 (MQ=255)
                                            gCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAg                                                           <  2:1821562/98‑1 (MQ=255)
                                             cGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGACATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACa                                                        >  1:1824472/1‑100 (MQ=255)
                                                    atcttttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGttt                                                 <  2:1739111/96‑1 (MQ=255)
                                                    ataatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTACCCAGGTTGTAAACCTGACAGGCGAAGCGCACCAGACAACGGtt                                                  >  2:799709/1‑99 (MQ=38)
                                                      aatTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCa                                               >  2:835832/1‑100 (MQ=255)
                                                       atTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                              <  1:1142414/100‑1 (MQ=255)
                                                       atTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                              <  1:2133610/100‑1 (MQ=255)
                                                       atTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                              <  1:279589/100‑1 (MQ=255)
                                                       agttATGGCATGTTGCCGTATGCTGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCag                                              <  1:2481802/98‑1 (MQ=38)
                                                        tttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGtttagat                                             >  1:1739127/1‑96 (MQ=255)
                                                        tttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGGTGTAGACCTGACAGGCGAAGCGCATCAGACAAAGTTTTCag                                              >  2:2545938/1‑99 (MQ=255)
                                                         ttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCagag                                            <  2:603123/100‑1 (MQ=255)
                                                         ttATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCagag                                            <  1:1733108/100‑1 (MQ=255)
                                                           aTGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGGTGTAGACCTGACAGGCGAAGCAGATCAGAGAACGGTTTCAGAGtt                                          >  2:426662/1‑100 (MQ=38)
                                                            tGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTc                                         <  1:2435909/100‑1 (MQ=255)
                                                              tCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCaa                                       <  2:2083347/100‑1 (MQ=255)
                                                              tCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCaa                                       >  1:1764506/1‑100 (MQ=255)
                                                                aGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAtt                                     <  1:2253658/100‑1 (MQ=255)
                                                                aGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAAtt                                     >  2:1669860/1‑100 (MQ=255)
                                                                 ggTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTATACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTg                                    <  2:1468359/100‑1 (MQ=255)
                                                                  gTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGc                                   >  2:189279/1‑100 (MQ=255)
                                                                   ttGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                                  <  2:2196486/100‑1 (MQ=255)
                                                                   ttGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                                  <  2:798392/100‑1 (MQ=255)
                                                                   atgccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                                  <  1:1513023‑M1/68‑1 (MQ=255)
                                                                   atgccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGcc                                  <  1:2167044‑M1/68‑1 (MQ=255)
                                                                     gccggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCa                                <  1:1073328‑M1/70‑1 (MQ=255)
                                                                      ccGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCAt                               >  1:106102/1‑100 (MQ=255)
                                                                        ggataaggcgtttacgccgcatccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCCGAGATCAATTGCCCAt                               <  2:205595‑M1/71‑1 (MQ=255)
                                                                        ggATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTATACCTGACAGGCGAAGCGCATCAGACAACGTTTTCAGAGTTCAATTGcc                                  <  2:1658087/95‑1 (MQ=255)
                                                                         gATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCg                            <  1:1533408/100‑1 (MQ=255)
                                                                           tGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGc                          <  1:752053/100‑1 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                        >  1:1843178/1‑100 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                        <  2:1465319/100‑1 (MQ=255)
                                                                             cggcgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCAt                        >  1:1332702/1‑100 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTATACCTGACAGGCGAAGCGCATCAGACAACGGTTTAAGAGTTCAATTGCCCATTAGGCATGaa                     >  1:853381/1‑100 (MQ=255)
                                                                                cgTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGaa                     >  1:456822/1‑100 (MQ=255)
                                                                                  tAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAAc                   <  2:2054265/100‑1 (MQ=255)
                                                                                  tAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAAc                   <  1:1976788/100‑1 (MQ=255)
                                                                                  tAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAAc                   <  1:1976339/100‑1 (MQ=255)
                                                                                   aaaCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACa                  <  1:1536120/100‑1 (MQ=255)
                                                                                   aaaCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACa                  >  2:705963/1‑100 (MQ=255)
                                                                                     aCGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaa                >  1:348189/1‑100 (MQ=255)
                                                                                      cGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaaa               >  2:2306540/1‑100 (MQ=255)
                                                                                      cGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACaaaa               <  1:400813/100‑1 (MQ=255)
                                                                                       gCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAAt              >  2:1093818/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATc             >  1:1680340/1‑100 (MQ=255)
                                                                                        ccTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATc             >  2:147251/1‑100 (MQ=255)
                                                                                         cTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCa            >  2:929099/1‑100 (MQ=255)
                                                                                            atccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCAc           <  1:1317671‑M1/91‑1 (MQ=255)
                                                                                            atccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCg         >  1:1209747‑M1/8‑100 (MQ=255)
                                                                                             tccggcATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCACATTCGGCATGAAACAAAATCACCGc        <  1:1320072‑M1/94‑1 (MQ=255)
                                                                                                  cATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGc   >  1:2495921‑M1/2‑100 (MQ=255)
                                                                                                   aTACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGcc  <  1:379055/100‑1 (MQ=255)
                                                                                                   aTACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGcc  <  1:756238/100‑1 (MQ=255)
                                                                                                   aTACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGcc  <  2:1319891/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
ATGAGTTAGCGCTGGTGATGGCGGCGTTTGATACGCACCCGGAGGCGGGAAAATAATTTATGTCAGGTTGCCGGATGCGGCGTAAACGCCTTATCCGGCATACATTAGCCCGGTTGTAGACCTGACAGGCGAAGCGCATCAGACAACGGTTTCAGAGTTCAATTGCCCATTCGGCATGAAACAAAATCACCGCTGTGCC  >  NC_000913/1534814‑1535012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.