New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1534913 =NA (NA)4 (0.040) 3/164 NT NA noncoding (31/75 nt) REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences REP118 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 3674381 = NA (NA)noncoding (1/93 nt) REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences REP263 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 141 total aligned reads displayed.

CTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATG  >  NC_000913/3674282‑3674480
                                                                                                   |                                                                                                   
gcacagcggtgattttgtttcatgccgaatgggcaattgaactctgaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatg                                                                                                     >  1:2495921‑M2/100‑100 (MQ=255)
cttcttCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAgg                                                                                                     >  1:1812006/1‑100 (MQ=255)
cttcttCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAgg                                                                                                     >  1:649304/1‑100 (MQ=255)
  tcttcGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGcc                                                                                                   >  1:1065979/1‑100 (MQ=255)
     gcggtgattttgtttcatgccgaatgtgcaattgaactctgaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatGCCGGa                                                                                                <  1:1320072‑M2/6‑1 (MQ=255)
      cggtgattttgtttcatgccgaatgggcaattgaactctgaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatGCCGGAt                                                                                               >  1:1209747‑M2/94‑100 (MQ=255)
          cGTTTGACGCTGTTTTTCGCGGGGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcgg                                                                                           <  1:867134/100‑1 (MQ=255)
          cGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcgg                                                                                           >  1:2390831/1‑100 (MQ=255)
           gTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATgcggc                                                                                          <  1:115830/100‑1 (MQ=255)
             ttGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGAACCGCGAATGCCGGGGAAAACGCCGCCTTAAAATAGGACGGATgagga                                                                                          >  2:2079794/1‑97 (MQ=255)
               gACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTaa                                                                                      <  2:9077/100‑1 (MQ=255)
                aCGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTaaa                                                                                     <  2:572515/100‑1 (MQ=255)
                  gCTGTTTTGCGCGGCGTTGATTGCCACCGCCGAATATAAAGACGACCCTCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                                   <  1:2042934/100‑1 (MQ=255)
                  gCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                                   <  1:718213/100‑1 (MQ=255)
                  gCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACg                                                                                   <  2:1065969/100‑1 (MQ=255)
                    tGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                                 <  1:815735/100‑1 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACTACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCt                                                                                <  1:2420668/100‑1 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGcc                                                                                 <  2:2385716/99‑1 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCt                                                                                >  2:1249355/1‑100 (MQ=255)
                     gTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCt                                                                                <  2:817469/100‑1 (MQ=255)
                         tGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATc                                                                            >  1:497357/1‑100 (MQ=255)
                            atgggcaattgatctcggaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatGCCGGATGCGGCGTAAACGCCTTATcc                                                                           <  2:205595‑M2/27‑1 (MQ=255)
                             cggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                        <  1:107338/100‑1 (MQ=255)
                              ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                       >  1:2635483/1‑100 (MQ=255)
                              ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                       <  1:657102/100‑1 (MQ=255)
                              ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                       <  2:348009/100‑1 (MQ=255)
                              ggcgTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCa                                                                       <  1:414614/100‑1 (MQ=255)
                               ggcaattgaactctgaaaccgttgtctgatgcgcttcgcctgtcaggtctacaaccgggctaatgtatGCCGGATGCGGCGTAAACGCCTTATCCGGCAt                                                                      <  1:1513023‑M2/32‑1 (MQ=255)
                                 gTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATa                                                                     >  2:2567415/1‑99 (MQ=255)
                                     aTTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAtt                                                                <  2:503431/100‑1 (MQ=255)
                                       tGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGAtttt                                                              <  2:1509/100‑1 (MQ=255)
                                        gCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTa                                                             >  1:1659513/1‑100 (MQ=255)
                                         ccACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAt                                                            >  2:2422307/1‑100 (MQ=255)
                                         ccACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAt                                                            >  2:691180/1‑100 (MQ=255)
                                          cACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTAtt                                                           >  2:1891565/1‑100 (MQ=255)
                                           aCCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                          <  1:992571/100‑1 (MQ=255)
                                           aCCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTc                                                          >  2:1081557/1‑100 (MQ=255)
                                             cgccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCgg                                                        >  1:479345/1‑100 (MQ=255)
                                               ccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGcc                                                      <  2:1527811/100‑1 (MQ=255)
                                               ccgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGcc                                                      <  1:929018/100‑1 (MQ=255)
                                                cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGcc                                                      <  1:627598/99‑1 (MQ=255)
                                                cgAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCt                                                     >  1:2261051/1‑100 (MQ=255)
                                                 gAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTg                                                    <  1:2164751/100‑1 (MQ=255)
                                                   atatAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCTGATGCGGCGTAAACGCCTGATCCGGCATACGATTTTATTCGGCCTg                                                    <  1:2218055/98‑1 (MQ=255)
                                                   atatAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGc                                                  <  1:1029599/100‑1 (MQ=255)
                                                     ataAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTc                                                >  1:589171/1‑100 (MQ=255)
                                                      taAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcc                                               >  2:1407759/1‑100 (MQ=255)
                                                      taAAGACGACCCGCCACTACCGGGGAAAACGCAGCCTTAAAATAGGCCGGATTCGGCGTAAACGCCTTGTCCGGCATACGATTTTAGTTGGCCTGGCtg                                                >  2:2482861/1‑98 (MQ=37)
                                                        aaGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTcccc                                             >  2:1225701/1‑100 (MQ=255)
                                                           acgacCCGCGAATGCCGGGGAAAAAGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTa                                          <  2:1107470/100‑1 (MQ=255)
                                                            cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGTCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTTCCCGTAg                                         <  1:1388331/100‑1 (MQ=255)
                                                            cgacCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAg                                         >  1:390158/1‑100 (MQ=255)
                                                               cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgcc                                      <  1:2480774‑M2/100‑4 (MQ=255)
                                                               cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgcc                                      <  1:2587590‑M2/100‑4 (MQ=255)
                                                               cccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgcc                                      >  2:298053‑M2/1‑97 (MQ=255)
                                                                ccGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccg                                     >  2:1131877‑M2/1‑96 (MQ=255)
                                                                 cgcgAATGCCGTGGAACACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgg                                    >  2:1550329‑M2/1‑95 (MQ=255)
                                                                 cgcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgg                                    <  2:1097611‑M2/100‑6 (MQ=255)
                                                                 cgcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgg                                    <  2:30779‑M2/100‑6 (MQ=255)
                                                                  gcgAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccgga                                   <  2:1967029‑M2/100‑7 (MQ=255)
                                                                    gAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATTCGGTGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                                 <  2:520676/100‑1 (MQ=255)
                                                                    gAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                                 >  1:1855822/1‑100 (MQ=255)
                                                                     aaTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGGGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATa                                 <  1:1181741/99‑1 (MQ=255)
                                                                     aaTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATaa                                <  2:125398/100‑1 (MQ=255)
                                                                      aTGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAg                               <  2:269133/100‑1 (MQ=255)
                                                                       tGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGa                              >  2:1712767/1‑100 (MQ=255)
                                                                        gCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGAt                             >  1:2573774/1‑100 (MQ=255)
                                                                        gCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGAt                             >  1:2559265/1‑100 (MQ=255)
                                                                        gCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGAt                             <  1:931003/100‑1 (MQ=255)
                                                                         ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                            >  1:1863441/1‑100 (MQ=255)
                                                                         ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                            >  1:1878849/1‑100 (MQ=255)
                                                                         ccGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                            >  1:1370620/1‑100 (MQ=255)
                                                                          cGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTACCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATg                            >  1:636683/1‑99 (MQ=255)
                                                                           ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                          <  2:1950904/100‑1 (MQ=255)
                                                                           ggggAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATgcg                          >  1:2601952/1‑100 (MQ=255)
                                                                               aaaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGCCATACGATTTTATTCGGCCTGACTCCCCGTAGGCCGGATAAAATGCGCCAg                      >  1:225752/1‑100 (MQ=255)
                                                                                aaaCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgc                     >  2:461223/1‑100 (MQ=255)
                                                                                  aCGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcat                   <  1:798942/100‑1 (MQ=255)
                                                                                    gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                 <  1:717460/100‑1 (MQ=255)
                                                                                    gCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcg                 <  1:317054/100‑1 (MQ=255)
                                                                                      aGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgca               <  1:1081567/100‑1 (MQ=255)
                                                                                      aGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAgcatcgca               <  2:1216272/100‑1 (MQ=255)
                                                                                        ccTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatc             >  1:96380‑M2/1‑72 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatcc            >  1:1460745‑M2/1‑71 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGTCCGGATAAGATGCGCCAGCATCGCATcc            <  2:53005/100‑1 (MQ=255)
                                                                                         cTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATcc            <  1:883958/100‑1 (MQ=255)
                                                                                           tAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCgg          >  1:632972/1‑100 (MQ=255)
                                                                                            aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggc         >  2:1338729‑M2/1‑68 (MQ=255)
                                                                                            aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggc         >  2:1035144‑M2/1‑68 (MQ=255)
                                                                                            aaaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGc         <  2:649300/100‑1 (MQ=255)
                                                                                             aaaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggcc        >  1:2398117‑M2/1‑67 (MQ=255)
                                                                                              aaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggcct       >  1:1037401‑M2/1‑66 (MQ=255)
                                                                                              aaTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCta       <  2:225750/100‑1 (MQ=255)
                                                                                                tATGCTGGATGTGGCGTAATCGCCTTATACGGCAGACGATTTTATTCGGCCTGGCTCCCCGTAGgccggatgcgatgctggcgcatcttatccggcc        >  2:1792470‑M2/1‑64 (MQ=255)
                                                                                                tAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCtata     >  1:466879/1‑100 (MQ=255)
                                                                                                 atGCCGGATAAGGCGTTTACGCCGCATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATaa    >  2:2008229‑M2/3‑100 (MQ=255)
                                                                                                 aGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATaa    <  1:1312136/100‑1 (MQ=255)
                                                                                                  ggCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAAt   >  2:1406694/1‑100 (MQ=255)
                                                                                                   GCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg  >  1:790395‑M2/1‑100 (MQ=255)
                                                                                                   GCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATg  <  1:1249367‑M2/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CTTCTTCGCCCGTTTGACGCTGTTTTGCGCGGCGTGGATTGCCACCGCCGAATATAAAGACGACCCGCGAATGCCGGGGAAAACGCAGCCTTAAAATAGGCCGGATGCGGCGTAAACGCCTTATCCGGCATACGATTTTATTCGGCCTGGCTCCCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCTATAATG  >  NC_000913/3674282‑3674480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.