| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4449524 | 132 (1.030) | 6 (0.050) | 4/168 | NT | 4.6% | coding (129/531 nt) | ppa | inorganic pyrophosphatase |
| ? | NC_000913 | = 4449539 | 127 (1.050) | coding (114/531 nt) | ppa | inorganic pyrophosphatase | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4449422‑4449524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTG < NC_000913/4449539‑4449442 CGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAG > 1:1091162/1‑100CGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAG > 2:1858463/1‑100CGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAG < 2:3332927/100‑1 GGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACCGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGC < 2:490683/100‑1 GGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGC < 1:871386/100‑1 GGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGC < 2:2812203/100‑1 GAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCG > 1:2184921/1‑100 AGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGG > 1:2466022/1‑100 AGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGG < 1:2580413/100‑1 GGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCA < 1:2982769/100‑1 GTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCAT < 1:279333/100‑1 TCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCATG < 2:965600/100‑1 TCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCATG < 2:602824/100‑1 TCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCATG < 2:3004891/100‑1 CACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGCGCACTGTTCGTTGACCGCTTCATGT < 1:1175479/100‑1 GCGGCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGT > 2:1014782/1‑100 CGGCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTT < 1:1104687/100‑1 GGCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTG > 2:147041/1‑100 GCGCATTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTG < 1:1283250/99‑1 GCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTG < 2:2490147/99‑1 CGGAGTTGGGACCAGTACGTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4449422‑4449524‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcggCGCACTGTTCGTTGACCGCTTCATGTCCACCGCGATGTTCTATCCATGCAACTACGGTTACATCAACCACACCCTGTCTCTGGACGGTGACCCGGTTG < NC_000913/4449539‑4449442 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |