New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4449524132 (1.030)6 (0.050) 4/168 NT 4.6% coding (129/531 nt) ppa inorganic pyrophosphatase
?NC_000913 = 4449539 127 (1.050)coding (114/531 nt) ppa inorganic pyrophosphatase
Rejected: Frequency below cutoff threshold.

Only 100 of 150 total aligned reads displayed.

GTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCAGGGACG  >  NC_000913/4449440‑4449638
                                                                                                   |                                                                                                   
gTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTgcg                                                                                                     >  1:246023/1‑100 (MQ=255)
gTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTgcg                                                                                                     >  2:2055500/1‑100 (MQ=255)
  cAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGcc                                                                                                   >  2:147041‑M2/1‑98 (MQ=255)
  cAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGc                                                                                                    <  2:2490147‑M2/99‑2 (MQ=255)
  cAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAATGCGc                                                                                                    <  1:1283250‑M2/99‑2 (MQ=255)
   aaCCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGccg                                                                                                  <  1:1104687‑M2/100‑4 (MQ=255)
    aCCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGccgc                                                                                                 >  2:1014782‑M2/1‑96 (MQ=255)
      cGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGctc                                                                                               <  1:1878771/100‑1 (MQ=255)
        ggTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGctctc                                                                                             <  2:3171677/100‑1 (MQ=255)
          tCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCtt                                                                                           <  2:465412/100‑1 (MQ=255)
            aCCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTg                                                                                         >  1:820677/1‑100 (MQ=255)
             ccGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGt                                                                                        >  1:2983896/1‑100 (MQ=255)
              cGTCCAGAGACAGGGTGTGGTTGATGTACCCGTAGTTGCATGGCTAGAACATCGCGGCGGACATGCAGCAGTCACCGACCAGTGCGCCGCTATCTTTGTc                                                                                       <  1:2019102/100‑1 (MQ=255)
               gTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCg                                                                                      <  2:838572/100‑1 (MQ=255)
               gTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCg                                                                                      <  2:296567/100‑1 (MQ=255)
                tCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGa                                                                                     >  1:2309963/1‑100 (MQ=255)
                 ccAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGAt                                                                                    <  2:2525989/100‑1 (MQ=255)
                  cAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGAtt                                                                                   >  1:438922/1‑100 (MQ=255)
                  cAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGAtt                                                                                   >  1:2665476/1‑100 (MQ=255)
                    gagaCAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTc                                                                                 >  2:2251751/1‑100 (MQ=255)
                     agaCAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCg                                                                                <  2:313557/100‑1 (MQ=255)
                     agaCAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCg                                                                                <  1:3439165/100‑1 (MQ=255)
                       aCAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTa                                                                              <  1:683851/100‑1 (MQ=255)
                          gggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTAttt                                                                           <  2:3192857/100‑1 (MQ=255)
                          gggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTAttt                                                                           <  1:218333/100‑1 (MQ=255)
                          gggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTAttt                                                                           >  1:3091126/1‑100 (MQ=255)
                           ggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTg                                                                          <  2:1115118/100‑1 (MQ=255)
                           ggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTg                                                                          >  1:2691870/1‑100 (MQ=255)
                           ggTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTg                                                                          >  1:3323053/1‑100 (MQ=255)
                            gtgtGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGa                                                                         <  2:2848087/100‑1 (MQ=255)
                            gtgtGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGa                                                                         <  1:2266816/100‑1 (MQ=255)
                              gtgGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATc                                                                       >  1:1333030/1‑100 (MQ=255)
                               tgGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCg                                                                      <  1:348439/100‑1 (MQ=255)
                               tgGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCg                                                                      >  1:3190656/1‑100 (MQ=255)
                               tgGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCg                                                                      <  1:2317399/100‑1 (MQ=255)
                               tgGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCg                                                                      <  2:1850341/100‑1 (MQ=255)
                                ggTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCgg                                                                     <  1:544999/100‑1 (MQ=255)
                                 gTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGa                                                                    <  1:312037/100‑1 (MQ=255)
                                  ttGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGAt                                                                   >  2:163217/1‑100 (MQ=255)
                                  ttGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGAt                                                                   >  2:1954664/1‑100 (MQ=255)
                                   tGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATc                                                                  <  2:2556951/100‑1 (MQ=255)
                                    gATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCt                                                                 >  1:8018/1‑100 (MQ=255)
                                      tGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGc                                                               <  1:1329544/100‑1 (MQ=255)
                                       gTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCg                                                              <  2:246025/100‑1 (MQ=255)
                                         aaCCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGtt                                                            >  1:482290/1‑100 (MQ=255)
                                         aaCCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGACAACGAACAGTGCGCCGCGCTCTTTGTCGATTTCGTATTTGATCGGATCTGCgct                                                            >  1:2903528/1‑98 (MQ=255)
                                           ccGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAg                                                          >  2:1319918/1‑100 (MQ=255)
                                             gTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGcc                                                        >  1:1196567/1‑100 (MQ=255)
                                              tAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCg                                                       <  1:2470589/100‑1 (MQ=255)
                                                gTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCggg                                                     <  2:2466041/100‑1 (MQ=255)
                                                 ttGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGa                                                    <  2:2691891/100‑1 (MQ=255)
                                                  tGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGAt                                                   <  1:2864801/100‑1 (MQ=255)
                                                   gCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGAtc                                                  <  2:1693302/100‑1 (MQ=255)
                                                   gCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGAtc                                                  <  1:1647385/100‑1 (MQ=255)
                                                     aTGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGAtctc                                                <  2:165678/100‑1 (MQ=255)
                                                     aTGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGAtctc                                                <  1:2518299/100‑1 (MQ=255)
                                                        gATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAAt                                             >  2:2245609/1‑100 (MQ=255)
                                                        gATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAAt                                             <  2:2837738/100‑1 (MQ=255)
                                                        gATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAAt                                             <  2:1764187/100‑1 (MQ=255)
                                                         aTAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATa                                            >  1:2500909/1‑100 (MQ=255)
                                                           aGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATaac                                          <  1:1997403/100‑1 (MQ=255)
                                                           aGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATaac                                          <  1:1082283/100‑1 (MQ=255)
                                                               cATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACg                                      <  2:2905479/100‑1 (MQ=255)
                                                               cATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACg                                      <  2:2665496/100‑1 (MQ=255)
                                                                 tCGCGGTGGACATGAAGCGGTCAACGAACAGCGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTa                                    <  2:3049145/100‑1 (MQ=255)
                                                                  cgcgGTGGACATGAAGCTGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGAATATCAATAACAACGTAg                                   <  1:858115/100‑1 (MQ=255)
                                                                  cgcgGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAg                                   <  2:438926/100‑1 (MQ=255)
                                                                   gcgGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGa                                  <  1:715950/100‑1 (MQ=255)
                                                                   gcgGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGa                                  <  2:1600314/100‑1 (MQ=255)
                                                                     ggTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATg                                <  2:2840485/100‑1 (MQ=255)
                                                                     ggTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATg                                <  1:343158/100‑1 (MQ=255)
                                                                     ggTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATg                                <  2:2997815/100‑1 (MQ=255)
                                                                       tGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTc                              >  1:3199517/1‑100 (MQ=255)
                                                                        ggACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCt                             >  1:2482992/1‑100 (MQ=255)
                                                                         tctaTGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGAGCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTc                              <  1:3353368/95‑1 (MQ=255)
                                                                          aCATGAAGCGGTCAACGAACAGTGCGccgcttcatgtccaccgcgatgttctatccatgcaactacggttacatcaaccacaccctgtctctggacggtg                           <  1:1175479‑M2/100‑75 (MQ=255)
                                                                           cATGAAGCGGTCAACGAACAGTGCGccgcttcatgtccaccgcgatgttctatccatgcaactacggttacatcaaccacaccctgtctctggacggtga                          <  2:965600‑M2/100‑76 (MQ=255)
                                                                           cATGAAGCGGTCAACGAACAGTGCGccgcttcatgtccaccgcgatgttctatccatgcaactacggttacatcaaccacaccctgtctctggacggtga                          <  2:602824‑M2/100‑76 (MQ=255)
                                                                            aTGAAGCGGTCAACGAACAGTGCGccgcttcatgtccaccgcgatgttctatccatgcaactacggttacatcaaccacaccctgtctctggacggtgac                         <  1:279333‑M2/100‑77 (MQ=255)
                                                                            aTGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTcagat                          >  2:3353392/1‑95 (MQ=255)
                                                                            aTGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCg                         <  2:1080079/100‑1 (MQ=255)
                                                                             tGAAGCGGTCAACGAACAGTGCGccgcttcatgtccaccgcgatgttctatccatgcaactacggttacatcaaccacaccctgtctctggacggtgacc                        <  1:2982769‑M2/100‑78 (MQ=255)
                                                                             tGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATGTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTcctg                        >  1:2773893/1‑98 (MQ=255)
                                                                              gAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGc                       <  2:3138102/100‑1 (MQ=255)
                                                                              gAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATATGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGc                       >  1:2210505/1‑100 (MQ=255)
                                                                               aaGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCa                      >  2:1419233/1‑100 (MQ=255)
                                                                               aaGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCa                      >  2:3229082/1‑100 (MQ=255)
                                                                                aGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAg                     >  1:1254724/1‑100 (MQ=255)
                                                                                   ggTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATc                  <  2:1143091/100‑1 (MQ=255)
                                                                                   ggTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATc                  >  2:1958830/1‑100 (MQ=255)
                                                                                   ggTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATc                  <  2:644921/100‑1 (MQ=255)
                                                                                    gTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCt                 <  2:2483011/100‑1 (MQ=255)
                                                                                        aCGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTAc             >  2:3034165/1‑100 (MQ=255)
                                                                                          gAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTAccc           >  2:1044398/1‑100 (MQ=255)
                                                                                          gAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTAccc           <  2:1196578/100‑1 (MQ=255)
                                                                                          gAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTAccc           >  1:1627774/1‑100 (MQ=255)
                                                                                             cAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCa        >  2:1110659/1‑100 (MQ=255)
                                                                                                  cgccgcTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCAGGGAc   >  2:133439/1‑100 (MQ=255)
                                                                                                  cgccgcTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCAGGGAc   <  1:1843053/100‑1 (MQ=255)
                                                                                                   gccgcTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCAGGGACg  >  2:2079558/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GTCAACCGGGTCACCGTCCAGAGACAGGGTGTGGTTGATGTAACCGTAGTTGCATGGATAGAACATCGCGGTGGACATGAAGCGGTCAACGAACAGTGCGCCGCTCTCTTTGTCGATTTCGTATTTGATCGGATCTGCGTTAGCCGGGATCTCAATAACAACGTAGATGTCTTCCGGCAGATCTTTACCCGCAGGGACG  >  NC_000913/4449440‑4449638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.