BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1816343	NA (NA)	4 (0.030)	4/172	NT	NA	noncoding (159/189 nt)	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913	= 1816373	NA (NA)	4 (0.030)	4/172	NT	NA	noncoding (189/189 nt)	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 132 total aligned reads displayed.

GCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAA  >  NC_000913/1816243‑1816442

gCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAG‑‑TCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCg                                                                                                    >  1:1575473/1‑100 (MQ=255)

      aaCACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCgg                                                                                                <  2:1663697/100‑1 (MQ=255)

      aaCACGTAGGCCGGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCgg                                                                                                >  1:2130428/1‑100 (MQ=255)

          cGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGc                                                                                            >  1:623789/1‑100 (MQ=255)

          cGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGc                                                                                            >  1:754207/1‑100 (MQ=255)

            tAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCaa                                                                                          >  2:2262995/1‑100 (MQ=255)

            tAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCaa                                                                                          >  1:1555240/1‑100 (MQ=255)

             aGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAg                                                                                         <  1:1985956/100‑1 (MQ=255)

              ggCCTGATAAGCGAAGCGCATCAGGCAGGTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAgg                                                                                        >  1:1601529/1‑100 (MQ=255)

               gCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGt                                                                                       >  2:1465496/1‑100 (MQ=255)

                ccTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGAAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGtt                                                                                      >  2:1774894/1‑100 (MQ=255)

                  tGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCGAGGTTCa                                                                                    >  2:2111241/1‑100 (MQ=255)

                     tAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGGAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCAcgc                                                                                 >  1:1675286/1‑100 (MQ=255)

                     tAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCAcgc                                                                                 >  2:2473201/1‑100 (MQ=255)

                       agcgaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCAcgccg                                                                               >  1:2927521/1‑100 (MQ=255)

                       agcgaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCAcgccg                                                                               >  1:787519/1‑100 (MQ=255)

                        gcgaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCAGATGCAAGGTTCAcgccgc                                                                              <  1:560925/100‑1 (MQ=255)

                          gaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCAt                                                                            >  1:1150483/1‑100 (MQ=255)

                           aagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATc                                                                           >  2:418534/1‑100 (MQ=255)

                               gcATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCgccggatgcggcgtgaaccttgcatccggc                                                                       <  2:836637‑M1/100‑31 (MQ=255)

                               gcATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGC                                                                       >  1:2183332‑M2/1‑100 (MQ=255)

                               gcATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCAGATGCAAGGTTCACGCCGCATCTGGC                                                                       >  1:1971744‑M2/1‑100 (MQ=255)

                                cATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCgccagatgcggcgtgaaccttgcatccggcg                                                                      <  1:2270636‑M1/100‑32 (MQ=255)

                                cATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCa                                                                      >  1:861423/1‑100 (MQ=255)

                                cATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCa                                                                      >  1:1415452/1‑100 (MQ=255)

                                  tCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCaaa                                                                    >  2:1640670/1‑100 (MQ=255)

                                   cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                   <  1:3157947/100‑1 (MQ=255)

                                   cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                   <  2:97144/100‑1 (MQ=255)

                                   cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                   >  1:1353595/1‑100 (MQ=255)

                                    aGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACa                                                                  >  1:2358898/1‑100 (MQ=255)

                                    aGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACa                                                                  >  2:803866/1‑100 (MQ=255)

                                     ggCATTTTTGCGTTTGTCAGCAGTCTCAAGCGGCTCAGTTACGCCGCCTTTGTATGAATTTATCGCCGGATGCAAGGTTCACGCCGCATCTG                                                                         >  2:2932078‑M2/1‑92 (MQ=255)

                                     ggCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACAt                                                                 >  1:840069/1‑100 (MQ=255)

                                        aGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCt                                                              <  2:623789/100‑1 (MQ=255)

                                        aGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCt                                                              <  2:2456796/100‑1 (MQ=255)

                                         gTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTc                                                             >  2:1264867/1‑100 (MQ=255)

                                           tttGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCAc                                                           <  1:1692736/100‑1 (MQ=255)

                                              gCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTa                                                        >  2:2103119/1‑100 (MQ=255)

                                               cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                       >  1:1027966/1‑100 (MQ=255)

                                               cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                       <  1:109139/100‑1 (MQ=255)

                                               cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                       <  2:2321450/100‑1 (MQ=255)

                                               cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                       <  1:3227816/100‑1 (MQ=255)

                                                gTTTGTCAGCTGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTaca                                                      <  2:2130413/100‑1 (MQ=255)

                                                 tttGTCAGTAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTacac                                                     <  2:1208742/100‑1 (MQ=255)

                                                 tttGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTacac                                                     <  1:719602/100‑1 (MQ=255)

                                                   tGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACAt                                                   <  1:1108862/100‑1 (MQ=255)

                                                    gTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATc                                                  >  2:1984958/1‑100 (MQ=255)

                                                    gTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTCTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATc                                                  >  2:2545909/1‑100 (MQ=255)

                                                     tCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATcc                                                 >  1:385940/1‑100 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCACGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATc                                                  >  1:2828083/1‑98 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                >  1:927109/1‑100 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                >  1:1689101/1‑100 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                <  1:2943537/100‑1 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                >  1:1453011/1‑100 (MQ=255)

                                                      cagcagTCTCAAGCGGCGCAGTTAAGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCCCATCTGGCAAACATCCTCACTTACACATccc                                                >  1:412979/1‑100 (MQ=255)

                                                        gcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGa                                              >  2:1779272/1‑100 (MQ=255)

                                                         cagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGAt                                             <  2:3147265/100‑1 (MQ=255)

                                                          agTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATa                                            <  1:307831/100‑1 (MQ=255)

                                                           gTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATaa                                           <  1:1774906/100‑1 (MQ=255)

                                                            tctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAAc                                          <  2:2737653/100‑1 (MQ=255)

                                                            tctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAAc                                          <  2:2563606/100‑1 (MQ=255)

                                                            tcacAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAAc                                          <  2:676637/97‑1 (MQ=255)

                                                             ctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACt                                         <  2:1555231/100‑1 (MQ=255)

                                                             ctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACt                                         <  1:1640680/100‑1 (MQ=255)

                                                               cAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCAGGATGTCAGGTTCACGCCGGATATGGGAACCACACTCACTTACACATCACGATAACTc                                        >  2:3223911/1‑99 (MQ=255)

                                                                aaGCGGCGCAGTTACGCCTCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCTCGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTccc                                      <  2:1027961/100‑1 (MQ=255)

                                                                aaGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTccc                                      >  1:2518852/1‑100 (MQ=255)

                                                                aaGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTccc                                      >  1:1595024/1‑100 (MQ=255)

                                                                 aacggcgCAGTTAAGCCGCCTTTGTAGGAATAAATCGCCGGAAGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTcccc                                     >  1:2188665/3‑100 (MQ=255)

                                                                 aGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTcccc                                     <  2:3106687/100‑1 (MQ=255)

                                                                 aGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCATCACTTACACATCCCGATAAc                                          >  1:596729/1‑95 (MQ=255)

                                                                    ggcgCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAc                                  >  1:346421/1‑100 (MQ=255)

                                                                     gcgcAGTTACGCCGCTTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                 <  1:3204605/100‑1 (MQ=255)

                                                                     gcgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGTATGCAAGGTTCACGCCGCATCTGCCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                 <  2:2963941/100‑1 (MQ=255)

                                                                     gcgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                 <  2:2228529/100‑1 (MQ=255)

                                                                     gcgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                 <  1:2231849/100‑1 (MQ=255)

                                                                      cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCg                                >  1:825558/1‑100 (MQ=255)

                                                                      cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCg                                >  2:1349826/1‑100 (MQ=255)

                                                                            tACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAAcc                          >  2:1618239/1‑100 (MQ=255)

                                                                              cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCgattaattcctacaaaggcggcgtaactgcgccgcttgagactgctg                        >  1:1238671‑M2/1‑53 (MQ=255)

                                                                              cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCAc                        >  2:295074/1‑100 (MQ=255)

                                                                                ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGc                      >  2:1894093/1‑100 (MQ=255)

                                                                                ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGGTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGc                      <  2:2987002/100‑1 (MQ=255)

                                                                                     tttGTATGAAGTCAGCGCCGAGTGCAAGGTTCTCGCCTTATCGCGCAAACATCCTCACTTTCTCATCCCTATATCTCTTCATCCGAGAACCGCGCTGAGc                 <  2:2012388/100‑1 (MQ=255)

                                                                                     tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                 <  2:526814/100‑1 (MQ=255)

                                                                                     tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                 <  1:1779284/100‑1 (MQ=255)

                                                                                     tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                 <  2:1689089/100‑1 (MQ=255)

                                                                                        gTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGAt              <  1:2263011/100‑1 (MQ=255)

                                                                                        gTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGAt              >  1:3255144/1‑100 (MQ=255)

                                                                                        gTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGAt              <  1:857693/100‑1 (MQ=255)

                                                                                         tAGGAATTAATCGCCGGATGCACGGTTCACGCAGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCCCGATGAGCGAt              >  1:3086859/1‑99 (MQ=255)

                                                                                         tAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCTATAACCACGCTGAGCGATa             <  1:2111256/100‑1 (MQ=255)

                                                                                         tAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATa             <  1:2507381/100‑1 (MQ=255)

                                                                                          aGGAATTAATCGCCGGATGCAATGTTCACGCGGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAg            <  2:2188649/100‑1 (MQ=255)

                                                                                           ggAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGc           >  2:2500191/1‑100 (MQ=255)

                                                                                            gAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCa          >  1:2012507/1‑100 (MQ=255)

                                                                                             aaTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCAc         <  1:556918/100‑1 (MQ=255)

                                                                                                  aTCGCCGGATGCAAGGTTCACGCCGCATCTGGCgattaattcctacaaaggcggcgtaactgcgccgcttgagactgctgacaaacgcaaaactgcctga    <  1:334867‑M2/100‑68 (MQ=255)

                                                                                                   tCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCa   <  2:363184/100‑1 (MQ=255)

                                                                                                   tCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCa   <  1:1739284/100‑1 (MQ=255)

GCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAA  >  NC_000913/1816243‑1816442

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.