BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1816343	NA (NA)	4 (0.030)	4/172	NT	NA	noncoding (159/189 nt)	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913	= 1816373	NA (NA)	4 (0.030)	4/172	NT	NA	noncoding (189/189 nt)	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP129 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 144 total aligned reads displayed.

GCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGT  >  NC_000913/1816274‑1816472

 cATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCa                                                                                                    >  1:861423/1‑100 (MQ=255)

   tCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCaaa                                                                                                  >  2:1640670/1‑100 (MQ=255)

    cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                                                 <  2:97144/100‑1 (MQ=255)

    cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                                                 >  1:1353595/1‑100 (MQ=255)

    cAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAAc                                                                                                 <  1:3157947/100‑1 (MQ=255)

     aGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACa                                                                                                >  1:2358898/1‑100 (MQ=255)

     aGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACa                                                                                                <  2:420290/100‑1 (MQ=255)

     aGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACa                                                                                                >  2:803866/1‑100 (MQ=255)

      ggCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACAt                                                                                               >  1:840069/1‑100 (MQ=255)

      ggCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACAt                                                                                               >  1:2563624/1‑100 (MQ=255)

       gCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATc                                                                                              >  2:2020982/1‑100 (MQ=255)

         aGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCt                                                                                            <  1:3173197/100‑1 (MQ=255)

         aGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCt                                                                                            <  2:2456796/100‑1 (MQ=255)

          gTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTc                                                                                           >  2:1264867/1‑100 (MQ=255)

            tttGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCAc                                                                                         <  1:1692736/100‑1 (MQ=255)

            tttGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCAc                                                                                         <  2:2892291/100‑1 (MQ=255)

               tcGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTa                                                                                      <  1:167398/99‑1 (MQ=255)

               gCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTa                                                                                      >  2:2103119/1‑100 (MQ=255)

                cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                                                     >  1:1027966/1‑100 (MQ=255)

                cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                                                     <  1:3227816/100‑1 (MQ=255)

                cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTac                                                                                     <  1:109139/100‑1 (MQ=255)

                cGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTaa                                                                                     >  2:167397/1‑99 (MQ=255)

                 gTTTGTCAGCTGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTaca                                                                                    <  2:2130413/100‑1 (MQ=255)

                 gTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTacg                                                                                    <  2:2976149/100‑2 (MQ=255)

                 gTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTaca                                                                                    <  2:1269035/100‑1 (MQ=255)

                  tttGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTacac                                                                                   >  2:3150561/1‑100 (MQ=255)

                  tttGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTacac                                                                                   <  1:719602/100‑1 (MQ=255)

                     gTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATc                                                                                >  2:1984958/1‑100 (MQ=255)

                      tCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATcc                                                                               >  1:385940/1‑100 (MQ=255)

                       cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                                              >  1:1689101/1‑100 (MQ=255)

                       cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                                              >  1:1453011/1‑100 (MQ=255)

                       cagcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATccc                                                                              <  1:2943537/100‑1 (MQ=255)

                       cagcagTCTCAAGCGGCGCAGTTAAGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCCCATCTGGCAAACATCCTCACTTACACATccc                                                                              >  1:412979/1‑100 (MQ=255)

                         gcagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGa                                                                            >  2:1779272/1‑100 (MQ=255)

                          cagTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGAt                                                                           <  2:3147265/100‑1 (MQ=255)

                           agTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATa                                                                          <  1:307831/100‑1 (MQ=255)

                            gTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATaa                                                                         <  1:1774906/100‑1 (MQ=255)

                             tctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAAc                                                                        <  2:2563606/100‑1 (MQ=255)

                             tcacAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAAc                                                                        <  2:676637/97‑1 (MQ=255)

                              ctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACt                                                                       <  1:1640680/100‑1 (MQ=255)

                              ctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACt                                                                       <  2:1555231/100‑1 (MQ=255)

                                cAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCAGGATGTCAGGTTCACGCCGGATATGGGAACCACACTCACTTACACATCACGATAACTc                                                                      >  2:3223911/1‑99 (MQ=255)

                                 aaGCGGCGCAGTTACGCCTCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCTCGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTccc                                                                    <  2:1027961/100‑1 (MQ=255)

                                 aaGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTccc                                                                    >  1:1595024/1‑100 (MQ=255)

                                  aacggcgCAGTTAAGCCGCCTTTGTAGGAATAAATCGCCGGAAGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTcccc                                                                   >  1:2188665/3‑100 (MQ=255)

                                  aGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCATCACTTACACATCCCGATAAc                                                                        >  1:596729/1‑95 (MQ=255)

                                     ggcgCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAc                                                                >  1:346421/1‑100 (MQ=255)

                                      gcgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                                               <  2:2228529/100‑1 (MQ=255)

                                      gcgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAAcc                                                               <  1:2231849/100‑1 (MQ=255)

                                       cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCg                                                              >  2:1349826/1‑100 (MQ=255)

                                       cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCg                                                              >  1:825558/1‑100 (MQ=255)

                                             tACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAAcc                                                        >  2:1618239/1‑100 (MQ=255)

                                               cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCgattaattcctacaaaggcggcgtaactgcgccgcttgagactgctg                                                      >  1:1238671‑M2/1‑53 (MQ=255)

                                               cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCAc                                                      >  2:295074/1‑100 (MQ=255)

                                                 ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGc                                                    >  2:1894093/1‑100 (MQ=255)

                                                 ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGGTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGc                                                    <  2:2987002/100‑1 (MQ=255)

                                                      tttGTATGAAGTCAGCGCCGAGTGCAAGGTTCTCGCCTTATCGCGCAAACATCCTCACTTTCTCATCCCTATATCTCTTCATCCGAGAACCGCGCTGAGc                                               <  2:2012388/100‑1 (MQ=255)

                                                      tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                                               <  1:99197/100‑1 (MQ=255)

                                                      tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                                               <  2:526814/100‑1 (MQ=255)

                                                      tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGc                                               <  1:1779284/100‑1 (MQ=255)

                                                          tAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCTATAACCACGCTGAGCGATa                                           <  1:2111256/100‑1 (MQ=255)

                                                          tAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATa                                           <  1:2507381/100‑1 (MQ=255)

                                                           aGGAATTAATCGCCGGATGCAATGTTCACGCGGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAg                                          <  2:2188649/100‑1 (MQ=255)

                                                           aGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAg                                          <  2:1575464/100‑1 (MQ=255)

                                                            ggAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGc                                         >  2:2500191/1‑100 (MQ=255)

                                                             gAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCa                                        >  1:2012507/1‑100 (MQ=255)

                                                              aaTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCAc                                       <  1:556918/100‑1 (MQ=255)

                                                               aTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCAcc                                      >  1:2082922/1‑100 (MQ=255)

                                                                   aTCGCCGGATGCAAGGTTCACGCCGCATCTGGCgattaattcctacaaaggcggcgtaactgcgccgcttgagactgctgacaaacgcaaaactgcctga                                  <  1:334867‑M2/100‑68 (MQ=255)

                                                                    tCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCa                                 <  2:2505877/100‑1 (MQ=255)

                                                                     cGCCGGATGCAAGGTTCACGCCGCATCTGGCgattaattcctacaaaggcggcgtaactgcgccgcttgagactgctgacaaacgcaaaactgcctgatg                                <  1:2270636‑M2/100‑70 (MQ=255)

                                                                     cGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCaa                                >  1:1695314/1‑100 (MQ=255)

                                                                      gCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAac                               <  1:1141056/100‑1 (MQ=255)

                                                                      gCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAac                               >  2:2392970/1‑100 (MQ=255)

                                                                       ccGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAGCCGATAACCACGCTGAGCGATAGCACCTTTCAacg                              <  2:385938/100‑1 (MQ=255)

                                                                       ccGGATGCAAGGTTCACGCCGCAGCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAacg                              <  1:324478/100‑1 (MQ=255)

                                                                           aTGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGc                          <  1:1440397/100‑1 (MQ=255)

                                                                            tGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCt                         >  2:488707/1‑100 (MQ=255)

                                                                              cAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACTCTGAGCGATAGCACCTTTCAACGACGCt                         <  2:3086832/98‑1 (MQ=255)

                                                                              cAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGa                       <  1:1465504/100‑1 (MQ=255)

                                                                               aaGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGAt                      <  1:1031061/100‑1 (MQ=255)

                                                                                aGGTTCACGTCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATg                     <  1:911739/100‑1 (MQ=255)

                                                                                 ggTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGt                    >  2:510824/1‑100 (MQ=255)

                                                                                  gTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTc                   <  2:1745953/100‑1 (MQ=255)

                                                                                   ttCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCa                  <  1:943523/100‑1 (MQ=255)

                                                                                   ttCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCa                  <  2:32685/100‑1 (MQ=255)

                                                                                   ttCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCa                  <  1:1746135/100‑1 (MQ=255)

                                                                                    tCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCaa                 >  2:134331/1‑100 (MQ=255)

                                                                                    tCACGCCGCATCTGGCAAACATCCTAACTTACACATCCCGATAACTGCCAAACCGATAACCACGCTGAGCGATAGCAACTTTCAAAGACGatgatg                     >  2:825512/1‑96 (MQ=255)

                                                                                     ctcgccgcATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAac                >  1:3005609/3‑100 (MQ=255)

                                                                                     cACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAac                <  2:2157993/100‑1 (MQ=255)

                                                                                     cACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAac                <  1:3048686/100‑1 (MQ=255)

                                                                                       cgccgcATCTGGCAAACATCCTCACTTACACATCCCTATAACTCCCCAACCGATAACCACGCTAAGCTATAGCACCTTTCAACGACGCTGATGTCAac                <  2:773428/98‑1 (MQ=255)

                                                                                         ccgcATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACAt            <  2:845860/100‑1 (MQ=255)

                                                                                          cgcATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATc           <  2:2358882/100‑1 (MQ=255)

                                                                                          cgcATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATc           >  1:3057791/1‑100 (MQ=255)

                                                                                                tGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCCCGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCt      >  1:2760396/1‑99 (MQ=255)

                                                                                                tGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTc     >  2:2667574/1‑100 (MQ=255)

                                                                                                 ggCAAACATCCTCACTTACACATCCCAATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTcc    >  1:1976852/1‑100 (MQ=255)

                                                                                                   cAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGt  >  1:1343566/1‑100 (MQ=255)

GCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGT  >  NC_000913/1816274‑1816472

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.