New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393090 =NA (NA)4 (0.040) 3/168 NT NA intergenic (‑49/+115) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 2393112 = NA (NA)intergenic (‑71/+93) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L

Only 100 of 134 total aligned reads displayed.

GCACAGGAAGCCGCCAATAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAAT  >  NC_000913/2392991‑2393189
                                                                                                   |                                                                                                   
gCACAGGAAGCCGCCAATAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACg                                                                                                     >  1:2164774/1‑100 (MQ=255)
gCACAGGAAGCCGACAATAAAGGGAATTAATATTAGCCGGGGTAGTAACATGGCGATCTTTATTCCTTATAAAAGTCACGTCAGGACCGGATTTTCAACg                                                                                                     >  2:2002248/1‑100 (MQ=255)
 gttgagttaaggattgtgggattgcccctgggcatataagaacgtaggtcggataagccgccttcgcggtgcatccgacactacccccagtccgaagaga                                                                                                    <  1:1938039‑M1/2‑1 (MQ=255)
  acaGGAAGCCGCCAATAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGaa                                                                                                   >  1:825926/1‑100 (MQ=255)
   caGGAAGCCGCCAATAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAAt                                                                                                  <  1:2402217/100‑1 (MQ=255)
    gagttaaggattgtgggattgcccctgggcatataagaacgtaggtcggataagccgccttcgcggtgcatccgacactacccccagtccgaagaGAAtt                                                                                                 <  1:826558‑M1/5‑1 (MQ=255)
          ccgccAATAAAGGGAATTAAGATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGTACCGGATTTTCAACGAATTCTCACg                                                                                           <  2:618650/100‑1 (MQ=255)
                aTAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGaa                                                                                     <  1:2330273/100‑1 (MQ=255)
                     gggAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATtc                                                                                <  2:1450947/100‑1 (MQ=255)
                     gggAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATtc                                                                                >  1:298246/1‑100 (MQ=255)
                     gggAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATtc                                                                                <  2:1079601/100‑1 (MQ=255)
                        aaTTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTctct                                                                             <  1:2140942/100‑1 (MQ=255)
                          ttAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTc                                                                           >  1:1833762/1‑100 (MQ=255)
                            ctgggcatataagaacgtaggtcggataagtcgccttcgcggtgcatccgacactacccccagtccgaagaTAATTCTCACGACAGAAAATTCTCTTCg                                                                          >  2:697600‑M1/72‑99 (MQ=255)
                            aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTc                                                                           >  2:2870190/1‑98 (MQ=255)
                            aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                         <  2:2248160/100‑1 (MQ=255)
                            aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                         >  1:1922558/1‑100 (MQ=255)
                            aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                         <  2:3172354/100‑1 (MQ=255)
                             atatTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGa                                                                        >  1:2073950/1‑100 (MQ=255)
                                ttAGCCAGGGTAGTACCATGGCGATCTTTATTCCTTGTAAAAGTCTCGTCAGGACCGGATTTTCAACGAATTCTCACGCCAGAAAAGTctct                                                                             >  2:2771950/1‑92 (MQ=255)
                                  agtcAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTggg                                                                   <  1:33410/97‑1 (MQ=255)
                                    ccAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTggggg                                                                 <  2:2780053/100‑1 (MQ=255)
                                     cAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGt                                                                >  1:1721138/1‑100 (MQ=255)
                                      aGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTgggatta                                                               >  1:501831/1‑96 (MQ=255)
                                        ggTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgt                                                             >  2:2365224/1‑100 (MQ=255)
                                         gtagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgtg                                                            <  2:1397169/100‑1 (MQ=255)
                                           agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTc                                                          >  2:2869831/1‑100 (MQ=255)
                                            gtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCg                                                         <  2:119365/100‑1 (MQ=255)
                                            gtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGAGGTAGTGTCg                                                         >  2:2092851/1‑100 (MQ=255)
                                              aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGa                                                       >  1:1696657/1‑100 (MQ=255)
                                               aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                      <  1:1006264/100‑1 (MQ=255)
                                               aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                      <  1:2723923/100‑1 (MQ=255)
                                               aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                      <  1:2446552/100‑1 (MQ=255)
                                                cATGGCGATCTTTATACCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAta                                                     <  1:3206436/100‑2 (MQ=255)
                                                  tGGCGATCTTTATTTCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACAGGGGGTAGTGTCGGATGCa                                                   >  2:1823392/1‑100 (MQ=255)
                                                   ggCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATg                                                     <  2:2844174/97‑1 (MQ=255)
                                                    gataagccgccttcgcggtgcatccgacactacccccagtccgaagaGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                 >  2:10937‑M1/48‑100 (MQ=255)
                                                    gataagccgccttcgcggtgcatccgacactacccccagtccgaagaGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                 >  2:11606‑M1/48‑100 (MQ=255)
                                                     cGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcg                                                >  1:2692486/1‑100 (MQ=255)
                                                       aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                              <  2:2119869/100‑1 (MQ=255)
                                                       aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAAAGAATTCTCACGACAGAAAATTTTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                              <  1:2042420/100‑1 (MQ=255)
                                                       aTCTTTATTCCTTGTAAAAATCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGGAAATGCTCTTCGTACTGGGTGTAGTATCGGATGAAAcgcg                                              >  2:2732927/1‑100 (MQ=255)
                                                         cTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGaa                                            >  2:193295/1‑100 (MQ=255)
                                                         cTTTATTCCTTGTAAAAGTACCGTCAGGGCCGGATTTTCAACTAATTCTCACGCCAGAAACTTCACTTCGGACTGGGGGTAGTGTCCGATGCATcgcg                                              >  2:1225778/1‑98 (MQ=255)
                                                          tttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAg                                           >  2:2162715/1‑100 (MQ=255)
                                                           ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                          >  1:1123147/1‑100 (MQ=255)
                                                              ttCCTTGTAAAAGTCCCGTCAGGAGCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggc                                         <  2:2953386/98‑1 (MQ=255)
                                                               tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                      <  1:1066548/100‑1 (MQ=255)
                                                               tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                      >  1:757759/1‑100 (MQ=255)
                                                               tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                      <  1:2578106/100‑1 (MQ=255)
                                                               tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACCGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                      <  1:3080577/100‑1 (MQ=255)
                                                                ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                     <  1:708077/100‑1 (MQ=255)
                                                                ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                     >  2:1570005/1‑100 (MQ=255)
                                                                ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                     >  2:1426397/1‑100 (MQ=255)
                                                                 cTTGTAAAAGTCCCGTCAGGACCGGATTTTTAACTAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                    >  2:2624364/1‑100 (MQ=255)
                                                                 cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTATTCGGAATGGGAGTAGTGTCGGATGCACCGCGAAggcg                                        >  2:3072902/1‑96 (MQ=255)
                                                                  ttGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTa                                   <  1:333378/100‑1 (MQ=255)
                                                                   tGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTAt                                  <  2:3092664/100‑1 (MQ=255)
                                                                     tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                >  2:1875045/1‑100 (MQ=255)
                                                                     tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                >  2:3161224/1‑100 (MQ=255)
                                                                     tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                >  2:907771/1‑100 (MQ=255)
                                                                     tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                >  1:696847/1‑100 (MQ=255)
                                                                      aaaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCg                               <  1:2487687/100‑1 (MQ=255)
                                                                       aaaGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCg                               >  2:2324456/1‑99 (MQ=255)
                                                                         aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                            <  1:983727/100‑1 (MQ=255)
                                                                          gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                           <  2:818393/100‑1 (MQ=255)
                                                                          gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                           >  1:522051/1‑100 (MQ=255)
                                                                              cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                       >  2:1938027/1‑100 (MQ=255)
                                                                              cGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGt                       >  1:1376412/1‑100 (MQ=255)
                                                                                tCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTc                     <  2:2229717/100‑1 (MQ=255)
                                                                                 cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                    <  1:2365240/100‑1 (MQ=255)
                                                                                 cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                    <  1:3033513/100‑1 (MQ=255)
                                                                                   ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                  <  1:96652/100‑1 (MQ=255)
                                                                                   ggACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTta                  >  1:1148599/1‑100 (MQ=255)
                                                                                    gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                 >  2:1520099/1‑100 (MQ=255)
                                                                                    gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                 <  1:1398126/100‑1 (MQ=255)
                                                                                     aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                 <  2:1068836/99‑1 (MQ=255)
                                                                                      ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat               >  1:519212/1‑100 (MQ=255)
                                                                                      ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat               >  1:1490956/1‑100 (MQ=255)
                                                                                      ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGCACTGGAGGTAGTGTCAGATCCAAAGCGACAGACGATTATCCTACCTCCGTTCTcata                <  2:2713974/99‑1 (MQ=255)
                                                                                       cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg              <  2:2256506/100‑1 (MQ=255)
                                                                                       cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg              <  1:291635/100‑1 (MQ=255)
                                                                                       cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg              <  2:1833750/100‑1 (MQ=255)
                                                                                       cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg              >  1:2138240/1‑100 (MQ=255)
                                                                                        ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc             <  1:1474924/100‑1 (MQ=255)
                                                                                           ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGCAGGCGGCTTATCCGACCTACGTTCTTATATGccc           >  1:2301488/1‑99 (MQ=255)
                                                                                           ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGccc           <  1:2624385/99‑1 (MQ=255)
                                                                                             ttCAACGAATTCTTACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg        <  1:833825/100‑1 (MQ=255)
                                                                                              tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGTTTATCCGACCTACGTTCTTATATGCCCAggg       >  2:3000539/1‑100 (MQ=255)
                                                                                              tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg       >  1:2553896/1‑100 (MQ=255)
                                                                                               cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg      >  1:1672827/1‑100 (MQ=255)
                                                                                               cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg      <  2:2380467/100‑1 (MQ=255)
                                                                                               cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg      <  1:2806951/100‑1 (MQ=255)
                                                                                               cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg      >  2:1604948/1‑100 (MQ=255)
                                                                                               cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg       <  2:2764601/99‑1 (MQ=255)
                                                                                                aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc     >  1:2303750/1‑100 (MQ=255)
                                                                                                aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc     >  1:107725/1‑100 (MQ=255)
                                                                                                aaCGAATTCTCAAGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCGCCGCGAAGACGGCTTATCCGACCTACGTTCTTATATGCCCAgggg      <  1:2029018/99‑1 (MQ=255)
                                                                                                  cGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCaa   <  1:2431761/100‑1 (MQ=255)
                                                                                                   GAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAAt  >  2:522049‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GCACAGGAAGCCGCCAATAAAGGGAATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAAT  >  NC_000913/2392991‑2393189

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.