New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2393090 =NA (NA)4 (0.040) 3/168 NT NA intergenic (‑49/+115) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L
?NC_000913 2393112 = NA (NA)intergenic (‑71/+93) nuoM/nuoL NADH:ubiquinone oxidoreductase, membrane subunit M/NADH:ubiquinone oxidoreductase, membrane subunit L

Only 100 of 147 total aligned reads displayed.

AATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGC  >  NC_000913/2393015‑2393211
                                                                                                 |                                                                                                   
aaTTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTctct                                                                                                   >  2:1114028/1‑100 (MQ=255)
aaTTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTctct                                                                                                   <  1:2140942/100‑1 (MQ=255)
    aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTc                                                                                                 >  2:2870190/1‑98 (MQ=255)
    aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                                               <  2:3172354/100‑1 (MQ=255)
    aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                                               >  1:1922558/1‑100 (MQ=255)
    aaTATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCAGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCgg                                                                                               <  2:2169326/100‑1 (MQ=255)
     atatTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGa                                                                                              >  1:2073950/1‑100 (MQ=255)
      tatTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGAc                                                                                             >  2:292464/1‑100 (MQ=255)
          agtcAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTggg                                                                                         <  1:33410/97‑1 (MQ=255)
          aGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTggg                                                                                         <  1:2575898/100‑1 (MQ=255)
            ccAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTggggg                                                                                       <  2:2780053/100‑1 (MQ=255)
             cAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGt                                                                                      >  1:1721138/1‑100 (MQ=255)
              aGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTgggatta                                                                                     >  1:501831/1‑96 (MQ=255)
                ggTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgt                                                                                   >  2:2365224/1‑100 (MQ=255)
                 gtagtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAgtg                                                                                  <  2:1397169/100‑1 (MQ=255)
                   agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTc                                                                                <  2:2803558/100‑1 (MQ=255)
                   agtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTc                                                                                >  2:2869831/1‑100 (MQ=255)
                    gtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCg                                                                               <  2:119365/100‑1 (MQ=255)
                    gtaACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGAGGTAGTGTCg                                                                               >  2:2092851/1‑100 (MQ=255)
                      aggtcggataagccgccttcgcggtgcatccgacactacccccagtccgaataGAATACTCACGACAGAAAATTCTCTTCGTACTTGGGGTAGTGTCGGa                                                                             >  2:729867‑M1/54‑100 (MQ=255)
                      aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGa                                                                             >  1:1696657/1‑100 (MQ=255)
                      aaCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGa                                                                             <  1:833309/100‑1 (MQ=255)
                       aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                            <  1:2723923/100‑1 (MQ=255)
                       aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                            <  1:1006264/100‑1 (MQ=255)
                       aCATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                            <  1:2446552/100‑1 (MQ=255)
                        cATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGAt                                                                            >  1:593781/1‑99 (MQ=255)
                            gataagccgccttcgcggtgcatccgacactacccccagtccgaagaGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                       >  2:11606‑M1/48‑100 (MQ=255)
                            gCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCAcc                                                                       >  1:48828/1‑100 (MQ=255)
                               aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                                                    <  2:2119869/100‑1 (MQ=255)
                               aTCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAAAGAATTCTCACGACAGAAAATTTTCTTCGGACTGGGGGTAGTGTCGGATGCACcgcg                                                                    <  1:2042420/100‑1 (MQ=255)
                                 cTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGaa                                                                  >  2:193295/1‑100 (MQ=255)
                                 cTTTATTCCTTGTAAAAGTACCGTCAGGGCCGGATTTTCAACTAATTCTCACGCCAGAAACTTCACTTCGGACTGGGGGTAGTGTCCGATGCATcgcg                                                                    >  2:1225778/1‑98 (MQ=255)
                                   ttATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAgg                                                                >  1:1123147/1‑100 (MQ=255)
                                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                            >  1:757759/1‑100 (MQ=255)
                                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                            <  1:1066548/100‑1 (MQ=255)
                                       tCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACCGGGGGTAGTGTCGGATGCACCGCGAAggcggc                                                            <  1:3080577/100‑1 (MQ=255)
                                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                           >  2:1570005/1‑100 (MQ=255)
                                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                           <  2:2314753/100‑1 (MQ=255)
                                        ccTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCt                                                           <  1:708077/100‑1 (MQ=255)
                                         cTTGTAAAAGTCCCGTCAGGACCGGATTTTTAACTAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCtt                                                          >  2:2624364/1‑100 (MQ=255)
                                         cTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTATTCGGAATGGGAGTAGTGTCGGATGCACCGCGAAggcg                                                              >  2:3072902/1‑96 (MQ=255)
                                          ttGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTa                                                         <  1:333378/100‑1 (MQ=255)
                                           tGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTAt                                                        <  2:3092664/100‑1 (MQ=255)
                                            ggtgcatccgacactacccccagtccgaagagaattttctgtcgtgagaattcTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATc                                                       >  2:10937‑M2/54‑100 (MQ=255)
                                             tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                                      >  2:1875045/1‑100 (MQ=255)
                                             tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                                      <  2:1692215/100‑1 (MQ=255)
                                             tAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATcc                                                      >  2:907771/1‑100 (MQ=255)
                                                 aGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGAcc                                                  <  1:983727/100‑1 (MQ=255)
                                                  gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                 <  2:818393/100‑1 (MQ=255)
                                                  gTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCt                                                 >  1:522051/1‑100 (MQ=255)
                                                    cccGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTAc                                               >  1:3188631/1‑100 (MQ=255)
                                                        tCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTc                                           <  1:153488/100‑1 (MQ=255)
                                                        tCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTc                                           <  2:2229717/100‑1 (MQ=255)
                                                         cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                          <  1:2365240/100‑1 (MQ=255)
                                                         cAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCt                                          <  1:3033513/100‑1 (MQ=255)
                                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                       <  2:2763868/100‑1 (MQ=255)
                                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                       <  1:1398126/100‑1 (MQ=255)
                                                            gACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                       >  2:1520099/1‑100 (MQ=255)
                                                             aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtata                                      >  2:1352901/1‑100 (MQ=255)
                                                             aCCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTtat                                       <  2:1068836/99‑1 (MQ=255)
                                                              ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTatat                                     <  2:147464/100‑1 (MQ=255)
                                                              ccGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGCACTGGAGGTAGTGTCAGATCCAAAGCGACAGACGATTATCCTACCTCCGTTCTcata                                      <  2:2713974/99‑1 (MQ=255)
                                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                    <  2:2256506/100‑1 (MQ=255)
                                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                    >  1:2138240/1‑100 (MQ=255)
                                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                    <  1:291635/100‑1 (MQ=255)
                                                               cGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATg                                    <  2:1833750/100‑1 (MQ=255)
                                                                ggATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGc                                   <  1:1474924/100‑1 (MQ=255)
                                                                   ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGCAGGCGGCTTATCCGACCTACGTTCTTATATGccc                                 >  1:2301488/1‑99 (MQ=255)
                                                                   ttttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGccc                                 <  1:2624385/99‑1 (MQ=255)
                                                                     ttCAACGAATTCTTACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                              <  1:833825/100‑1 (MQ=255)
                                                                     ttCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgg                              >  1:2693658/1‑100 (MQ=255)
                                                                     cgaagagaattttctgtcgtgagaattaTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGACTTATCCGACCTACGTTCTTATATGCCCAg                               >  2:697600‑M2/29‑99 (MQ=255)
                                                                      tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGTTTATCCGACCTACGTTCTTATATGCCCAggg                             >  2:3000539/1‑100 (MQ=255)
                                                                      tCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                             >  1:2553896/1‑100 (MQ=255)
                                                                       cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                            <  1:2432548/100‑1 (MQ=255)
                                                                       cAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAggg                             <  2:2764601/99‑1 (MQ=255)
                                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                           >  1:107725/1‑100 (MQ=255)
                                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                           >  1:2303750/1‑100 (MQ=255)
                                                                        aaCGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGc                           <  1:1109729/100‑1 (MQ=255)
                                                                        aaCGAATTCTCAAGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCGCCGCGAAGACGGCTTATCCGACCTACGTTCTTATATGCCCAgggg                            <  1:2029018/99‑1 (MQ=255)
                                                                              TTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATccc                     >  1:1570014‑M1/1‑100 (MQ=255)
                                                                              TTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATcc                      <  1:1184615‑M1/99‑1 (MQ=255)
                                                                               TCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCa                    >  2:2340499‑M1/1‑100 (MQ=255)
                                                                                ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                   >  1:2643854/1‑100 (MQ=255)
                                                                                ctcACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCcac                   <  2:757757/100‑1 (MQ=255)
                                                                                  cACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACaa                 >  2:2524006/1‑100 (MQ=255)
                                                                                   aCGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAAt                <  2:52594/100‑1 (MQ=255)
                                                                                   aCGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAAt                <  1:284715/100‑1 (MQ=255)
                                                                                     gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc              <  2:3159318/100‑1 (MQ=255)
                                                                                     gACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATcc              <  2:2407031/100‑1 (MQ=255)
                                                                                        aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTa           <  2:519210/100‑1 (MQ=255)
                                                                                        aGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCCTATATGCCCAGGGGCAATCCCACAATCCTTa           <  2:1819196/100‑1 (MQ=255)
                                                                                         naaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa          >  2:2041128/2‑100 (MQ=255)
                                                                                         gAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTaa          <  2:1925587/100‑1 (MQ=255)
                                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCTACCTACGTTCTTATATGTCCATGGGCAATCCCACAATCCTTAAc         <  2:1593663/100‑1 (MQ=255)
                                                                                          aaaaTTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAAc         <  1:2355284/100‑1 (MQ=255)
                                                                                           aaaTTCTCTTCGGACTGGGGGTAGTGGCGGATGCAGCGCGAAGGCGGCTTATCCGACCTACGTTGTTATATGCCCAGGGGCAATCCCACAATCCTTAAc         <  2:925127/99‑1 (MQ=255)
                                                                                              ttgtctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACt        <  2:593779/94‑1 (MQ=255)
                                                                                               tcTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAAc    <  1:1938039‑M2/98‑1 (MQ=255)
                                                                                                 tctTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGc  <  1:11606/100‑1 (MQ=255)
                                                                                                 |                                                                                                   
AATTAATATTAGCCAGGGTAGTAACATGGCGATCTTTATTCCTTGTAAAAGTCCCGTCAGGACCGGATTTTCAACGAATTCTCACGACAGAAAATTCTCTTCGGACTGGGGGTAGTGTCGGATGCACCGCGAAGGCGGCTTATCCGACCTACGTTCTTATATGCCCAGGGGCAATCCCACAATCCTTAACTCAACGC  >  NC_000913/2393015‑2393211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.