BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	411078 =	NA (NA)	5 (0.050)	4/164	NT	NA	noncoding (1/191 nt)	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	411111 =	NA (NA)	5 (0.050)	4/164	NT	NA	noncoding (34/191 nt)	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP35 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 151 total aligned reads displayed.

GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCA  >  NC_000913/411012‑411209

ggagcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcaccttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                      >  2:333796‑M1/67‑100 (MQ=255)

  ggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                    >  2:603845/1‑100 (MQ=255)

  ggcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTa                                                                                                    >  2:2223784/1‑100 (MQ=255)

  agcacttattgccggatgcggcgtgaacgccttatccggcctacggttctggcaccttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCt                                                                                                     >  2:1614230‑M1/65‑99 (MQ=255)

   gcgTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATACCTGATGCGACGCCTGCCGCGTCATATCAGGCCTAc                                                                                                   >  2:1306450/1‑100 (MQ=255)

     gTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaa                                                                                                 >  1:2923492/1‑100 (MQ=255)

     gTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaa                                                                                                 >  2:1932714/1‑100 (MQ=255)

        cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAg                                                                                              >  2:3218690/1‑100 (MQ=255)

        cgcgGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAg                                                                                              <  1:1599922/100‑1 (MQ=255)

           ggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTg                                                                                           <  2:906435/100‑1 (MQ=255)

           ggcgCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTg                                                                                           <  2:2900606/100‑1 (MQ=255)

            gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGc                                                                                          <  1:1207424/100‑1 (MQ=255)

            gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGc                                                                                          >  2:125001/1‑100 (MQ=255)

            gcgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGc                                                                                          <  1:3073419/100‑1 (MQ=255)

             cgcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGcc                                                                                         <  1:1775530/100‑1 (MQ=255)

              gcTGTGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGcc                                                                                         <  1:1910640/99‑1 (MQ=255)

              gcTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGcc                                                                                         <  1:2030879/99‑1 (MQ=255)

                tGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGa                                                                                      >  2:1268701/1‑100 (MQ=255)

                  cGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAc                                                                                    <  1:2358088/100‑1 (MQ=255)

                   gTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAc‑‑c                                                                                 >  2:747089/1‑100 (MQ=255)

                   gTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAAGTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAc‑‑c                                                                                 <  1:3147995/100‑1 (MQ=255)

                    tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑Cg                                                                                <  2:2503841/100‑1 (MQ=255)

                    tGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑Cg                                                                                >  1:919405/1‑100 (MQ=255)

                      gTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTa                                                                              <  1:1350229/100‑1 (MQ=255)

                      gTTATGCCAACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGTTGCGACGCTTGCCGCGTCTTATCATGCCTACAAAAGGTGCCAGAAC‑‑CGTa                                                                              <  2:1108535/100‑1 (MQ=25)

                        tATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAgg                                                                            <  1:2513543/100‑1 (MQ=255)

                           ggCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCg                                                                         <  2:2052754/100‑1 (MQ=255)

                           ggCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCg                                                                         >  2:2756829/1‑100 (MQ=255)

                            tccACAATAGTAAAAAACTTATTCAAATGGCGCATCATGCTTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCg                                                                         <  1:1402241/98‑1 (MQ=21)

                            gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCgg                                                                        >  1:166770/1‑100 (MQ=255)

                            gCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCg                                                                         >  1:975244/1‑99 (MQ=255)

                              cacaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGAt                                                                      <  1:2054135/100‑1 (MQ=255)

                               acaAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATa                                                                     >  2:934854/1‑100 (MQ=255)

                                caAGCGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGCCGCTTGCCGCGACTTCTCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGACGAATaa                                                                    >  1:664446/1‑100 (MQ=38)

                                  agagTAAAAAACGTGGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                  <  2:2531818/100‑1 (MQ=255)

                                  agagTAAAAAACGTCGGCAATTGGCCCATCATGCCTGATGCGTCGCGTGCCGCGTCATATCCGGCCTACAAAAGGTGCCAGAGC‑‑CGTAGGCCGGATAAgg                                                                  <  1:1470217/100‑1 (MQ=25)

                                  agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                  <  2:2054258/100‑1 (MQ=255)

                                  agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                  <  2:1317771/100‑1 (MQ=255)

                                  agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                  <  1:1256114/100‑1 (MQ=255)

                                  agagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCGTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAgg                                                                  <  1:2222858/100‑1 (MQ=255)

                                   gagTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGc                                                                 >  2:288043/1‑100 (MQ=255)

                                    agTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGc                                                                 >  1:1184593/1‑99 (MQ=255)

                                       aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTc                                                             <  1:441283/100‑1 (MQ=255)

                                       aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTc                                                             <  2:3022005/100‑1 (MQ=255)

                                       aaaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTc                                                             >  1:518685/1‑100 (MQ=255)

                                        aaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCa                                                            >  2:168239/1‑100 (MQ=255)

                                        aaaaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCa                                                            >  1:1120876/1‑100 (MQ=255)

                                          aaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCAcg                                                          <  2:2717464/100‑1 (MQ=255)

                                          aaaCGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCAcg                                                          >  2:347287/1‑100 (MQ=255)

                                             cGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCAcgccg                                                       >  2:180449/1‑100 (MQ=255)

                                               tAGGCAATTGGAGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCAcgcc                                                        <  1:126489/97‑1 (MQ=255)

                                                aGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCAt                                                    >  2:1802560/1‑100 (MQ=255)

                                                 ggCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATc                                                   <  1:2786330/100‑1 (MQ=255)

                                                 ggCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATc                                                   >  1:230228/1‑100 (MQ=255)

                                                  gCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAAGTGCCAGAAC‑‑CGTAGGCCGGATAAGACGTTTACGCCGCAt                                                    >  2:1332369/1‑98 (MQ=255)

                                                   cAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCg                                                 >  2:391415/1‑100 (MQ=255)

                                                    aaTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                >  1:801005/1‑100 (MQ=255)

                                                    aaTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                <  2:210438/100‑1 (MQ=255)

                                                    aaTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCgg                                                <  1:735108/100‑1 (MQ=255)

                                                     aTTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGc                                               <  1:1590078/100‑1 (MQ=255)

                                                        ggCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                            >  2:347836/1‑100 (MQ=255)

                                                        ggCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAAt                                            >  1:1153007/1‑100 (MQ=255)

                                                         gcgcATCATGCCTGATGCGACGCTTGCCGCTTCTTATCAGGCCTACAAAAAGTGCCAGAAC‑‑CGTAGGCCGGATAAAGCGTTCACGCCGCATCCGCCAATa                                           >  1:1828923/1‑100 (MQ=17)

                                                         gcgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTCGGCCGGATAAGGCGCTCACGCCGCACCCGCCAAt                                            >  2:3182492/1‑99 (MQ=18)

                                                         gcgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGTCGTTCACGCCGCATCCGGCAATa                                           >  1:1283198/1‑100 (MQ=255)

                                                         gcgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATa                                           <  2:919400/100‑1 (MQ=255)

                                                          cgcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATaa                                          >  1:788107/1‑100 (MQ=255)

                                                           gcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAg                                         <  1:747090/100‑1 (MQ=255)

                                                           gcATCATGCCTGATGCGACGCTTGCCGCGTCTTATCACGCCTACAAAAGGTGCCAGAAC‑‑CGTATGCCGGATAAGGCGTGCACGCCGCATCCGGCAATAAg                                         >  2:1236632/1‑100 (MQ=255)

                                                             tgcaggcctgataagacgcggcaagcgtcgcatcaggcCTGCAAAATGTGCCAGAACCGCGTAGGGCGGATAAGGCGTTCACGCCGCATCCGGCAATAAg                                         >  2:3044219‑M2/39‑100 (MQ=255)

                                                             atcatGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGt                                        <  2:2927383/99‑1 (MQ=255)

                                                                atGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTg                                       >  1:226666/1‑97 (MQ=255)

                                                                aggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCt                                     >  2:1614230‑M2/36‑99 (MQ=255)

                                                                 tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTcc                                   >  1:508691/1‑100 (MQ=255)

                                                                 tGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGAGAAGGCGTTCACGCCGCATCCGGCAATAAGAGCTc                                    >  2:2307753/1‑99 (MQ=255)

                                                                  gcctgataagacgcggcaagcgtcttatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCg                                  >  1:673147‑M2/34‑100 (MQ=255)

                                                                  GCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTcc                                   <  1:458629‑M1/99‑1 (MQ=255)

                                                                   cctgataagacgcggcaagcgtcgcatcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGa                                 >  1:1933514‑M2/33‑100 (MQ=255)

                                                                       ATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGcc                             >  1:1241614‑M1/1‑100 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCt                            <  1:3159021‑M1/100‑1 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                           >  2:1669436/1‑100 (MQ=255)

                                                                         gCGACGCTTGCCGCGTCTTAGCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTg                           >  1:3056909/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                          >  1:2391182/1‑100 (MQ=255)

                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGa                          >  1:2391317/1‑100 (MQ=255)

                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGAt                         >  2:86595/1‑100 (MQ=255)

                                                                            aCGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATACGGCAATAAGTGCTCCGATGCCTGATg                        >  2:1336386/1‑100 (MQ=255)

                                                                              gCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCg                      >  2:961369/1‑100 (MQ=255)

                                                                                 tGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGCTGCCTGATGCGACg                   >  2:573366/1‑100 (MQ=255)

                                                                                  gCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGc                  >  2:1218831/1‑100 (MQ=255)

                                                                                    cgcgTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGc                  <  1:2864654/98‑1 (MQ=255)

                                                                                     gcgTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTg               >  1:1464724/1‑100 (MQ=255)

                                                                                       gTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGcc             >  1:2745936/1‑100 (MQ=255)

                                                                                       gTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGcc             >  2:504231/1‑100 (MQ=255)

                                                                                        tCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg            <  1:2569466/100‑1 (MQ=255)

                                                                                        tCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcg            >  2:267108/1‑100 (MQ=255)

                                                                                         cTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgc           >  2:2314399/1‑100 (MQ=255)

                                                                                          ttATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCcgcg          <  2:2042428/100‑1 (MQ=255)

                                                                                            atcaggcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGt         >  2:2595326‑M2/8‑99 (MQ=255)

                                                                                                 gcCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATc   >  2:792906‑M2/3‑100 (MQ=255)

                                                                                                  cCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCa  <  1:1932726‑M2/99‑1 (MQ=255)

GCGGCGTACGCGGCGCTGCGTGGTTATGGCCACAAGAGTAAAAAACGTAGGCAATTGGCGCATCATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAAC‑‑CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCA  >  NC_000913/411012‑411209

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.