| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4389174 = | 64 (0.750) | 10 (0.130) | 5/164 | NT | 16.3% | coding (197/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | NC_000913 | 4389211 = | 44 (0.560) | coding (160/3324 nt) | mscM | mechanosensitive channel protein, miniconductance | |||||
TTGTGCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGC > NC_000913/4389113‑4389307 | ttGTGCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCAttt < 1:394553/100‑1 (MQ=255)ttGTGCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCCATAACTGGCTGATATTGTTTGATGCGCTCAAGGTAACCTTTTCGTTCCTCAAGCGCAttt < 2:388522/100‑1 (MQ=255) tgtgCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAATTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTa < 2:1523525/100‑1 (MQ=255) tgtgCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTa < 2:1169346/100‑1 (MQ=255) gtgCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTaa > 1:41712/1‑100 (MQ=255) ggcaaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTaa > 1:852726‑M1/60‑100 (MQ=255) tgCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAg < 1:155756/100‑1 (MQ=255) tgCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCACTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAg < 2:587999/100‑1 (MQ=255) gcaaaagcggtgaaacccgcacagccggatgtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTaa > 2:822403‑M1/59‑99 (MQ=255) gcaaaagcggcgaaacccgcacagccggaagtcgcagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGTATTTAAg > 2:1252373‑M1/59‑100 (MQ=255) gcgcgcAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 2:1869898/1‑100 (MQ=255) caaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 1:533553‑M1/58‑100 (MQ=255) caaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 2:337943‑M1/58‑100 (MQ=255) caaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 1:936036‑M1/58‑100 (MQ=255) caaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 1:870289‑M1/58‑100 (MQ=255) caaaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAgg > 2:2030791‑M1/58‑100 (MQ=255) gcgcAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTTTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCa > 2:1947122/1‑100 (MQ=255) gcgcAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCa > 1:1153340/1‑100 (MQ=255) aaagcggcgaaacccgcacagccggaagtcgtagaggcgctccagtctgccttaaATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCa > 1:1387155‑M1/56‑100 (MQ=255) cAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGa > 2:2170766/1‑99 (MQ=255) gTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGa > 2:1392093/1‑100 (MQ=255) gCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAgcg < 2:1515258/100‑1 (MQ=255) gCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAgcg < 2:110815/100‑1 (MQ=255) gTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTAc > 2:2032264/1‑100 (MQ=255) gTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTAc > 2:2217697/1‑100 (MQ=255) gTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTAc < 1:1197657/100‑1 (MQ=255) tttCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACg < 2:1865691/100‑1 (MQ=255) tCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGAc < 1:520774/100‑1 (MQ=255) cGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTTGTTCCTCAAGCGCATTTAAGGCAGACTGGAGGGCCTCTACGACt > 1:1300482/1‑100 (MQ=255) cGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACt > 1:2060048/1‑100 (MQ=255) cGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACt > 1:1355609/1‑100 (MQ=255) aaTTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCgg < 1:1181490/100‑1 (MQ=255) aTTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGc < 2:329364/100‑1 (MQ=255) aTTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGc < 2:766643/100‑1 (MQ=255) aTTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGc < 2:766785/100‑1 (MQ=255) ttATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCt > 1:1529762/1‑100 (MQ=255) aTCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCtgt > 1:869459/1‑100 (MQ=255) gATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCg > 2:1994774/1‑100 (MQ=255) aTAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCgg > 2:897096/1‑100 (MQ=255) aCTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGtt > 1:2225097/1‑100 (MQ=255) ttGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAGGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTc > 2:1521884/1‑100 (MQ=255) ttGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTc > 1:984011/1‑100 (MQ=255) tgccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCttt > 1:1387155‑M2/46‑100 (MQ=255) ttGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCtttt > 1:81493/1‑100 (MQ=255) ccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTg > 1:936036‑M2/44‑100 (MQ=255) ccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTg > 1:533553‑M2/44‑100 (MQ=255) ccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTg > 2:337943‑M2/44‑100 (MQ=255) ccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTg > 1:870289‑M2/44‑100 (MQ=255) ccttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTg > 2:2030791‑M2/44‑100 (MQ=255) cttaaatacgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTGCGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGc > 2:1252373‑M2/43‑100 (MQ=255) tttGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGcc < 1:530522/100‑1 (MQ=255) ttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGcc > 1:852726‑M2/42‑100 (MQ=255) ttaaatgcgcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACATCCGGCTGTGCGGGTTTCACCGCTTTTGc > 2:822403‑M2/42‑99 (MQ=255) ttGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCt < 1:1736824/100‑1 (MQ=255) gATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGc > 1:1544638/1‑100 (MQ=255) gATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAAGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGc > 1:917080/1‑100 (MQ=255) ATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCt < 2:561693‑M1/100‑1 (MQ=255) GCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTcc > 2:1285031‑M1/1‑100 (MQ=255) GCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTcc > 2:1739231‑M1/1‑100 (MQ=255) CGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTcc < 2:1474266‑M1/99‑1 (MQ=255) gcttgaggaacgaaaaggttcccttgagcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAg < 1:337945‑M2/67‑1 (MQ=255) GCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAg < 1:732715‑M1/100‑1 (MQ=255) GCTCAAGGGAACCTTTTCGTTCCTCAAGCGCAGTTAAGGCAGACTGGAGCGCCTCTACGACTTCAGGCTGTGCGGGTTTCGCCGCTTTTGCCTGc < 2:2275748‑M1/95‑1 (MQ=255) cAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTc > 2:2084837/1‑100 (MQ=255) aaGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTcc < 1:672201/100‑1 (MQ=255) aGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCt < 2:1229574/100‑1 (MQ=255) gggAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTg > 1:460375/1‑100 (MQ=255) gggAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTg < 2:1640022/100‑1 (MQ=255) ggAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGa > 1:170255/1‑100 (MQ=255) ggAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGa > 1:387356/1‑100 (MQ=255) aaCCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGt < 1:1450557/100‑1 (MQ=255) aaCCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGt < 2:1534081/100‑1 (MQ=255) ccTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGa > 1:359797/1‑100 (MQ=255) ccTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGa < 2:1807046/100‑1 (MQ=255) ccTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGa > 2:703338/1‑100 (MQ=255) tCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGc > 2:603262/1‑100 (MQ=255) cTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTa > 1:831051/1‑100 (MQ=255) cTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTa < 1:1417050/100‑1 (MQ=255) agcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCgg > 1:262957‑M2/8‑100 (MQ=255) agcgcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCgg > 2:1542630‑M2/8‑100 (MQ=255) gcatTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCggggg < 1:231564‑M2/96‑1 (MQ=255) catTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGc < 2:1787851‑M2/97‑1 (MQ=255) | TTGTGCGCGCAGAGTAGCGGAGAGTTTCGGATAATTATCGATAACTTGCTGATATTGTTTGATGCGCTCAAGGGAACCTTTTCGTTCCTCAAGCGCATTTAAGGCAGACTGGAGCGCCTCTACGACTTCCGGCTGTGCGGGTTTCGCCGCTTTTGCCTGCTCCAGTTCCTGAGTGATTTGTTTGCTATCGGGGGC > NC_000913/4389113‑4389307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |