New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2597686 =NA (NA)9 (0.110) 7/166 NT NA noncoding (14/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 2597714 = NA (NA)noncoding (42/46 nt) REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences REP181 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 110 total aligned reads displayed.

CATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGATG  >  NC_000913/2597616‑2597813
                                                                                                  |                                                                                                   
cATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAAc                                                                                                    >  1:344939/1‑100 (MQ=255)
 aacgtgtgcgtctgcaggaaaacgcgatttttgcggtaactcgcacgaaatttgtttgtcggacgtagtTCGGATTCGGCGTGAACGCCTTATCCGAAc                                                                                                    >  1:1855691‑M1/70‑99 (MQ=255)
 aacgtgtgcgtctgcaggaaaacgcgattttagcggtaattcgcacgaaatttgtttgtcggacgtagttcggatgcggcgtgaacgccttatccgaACt                                                                                                   <  2:486926‑M2/3‑1 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   >  1:170557/1‑100 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   <  1:2051534/100‑1 (MQ=255)
 aTCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACt                                                                                                   <  2:1510997/100‑1 (MQ=255)
    tttATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACg                                                                                                >  1:110267/1‑100 (MQ=255)
      tATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTc                                                                                              >  1:1425997/1‑100 (MQ=255)
      tATCAATCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTc                                                                                              <  1:2115843/100‑1 (MQ=255)
       aTCACTCCTGAGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTTTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTcc                                                                                             <  2:1821156/100‑1 (MQ=255)
        tCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTTTTGGGCCGGATTTTTTGTCGGATGCGGCGTGAACGCCTGATCCGAACTACGTcc                                                                                             >  1:108637/1‑99 (MQ=38)
        tCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCg                                                                                            >  1:2170062/1‑100 (MQ=255)
          aCTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGac                                                                                          >  2:280408/1‑100 (MQ=255)
          aCTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGac                                                                                          >  1:467080/1‑100 (MQ=255)
           cTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGaca                                                                                         >  2:1766191/1‑100 (MQ=255)
           cTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGaca                                                                                         <  1:1157633/100‑1 (MQ=255)
           cTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGaca                                                                                         <  1:1919716/100‑1 (MQ=255)
             ccTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaa                                                                                       >  2:1450667/1‑100 (MQ=255)
             ccTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaa                                                                                       >  2:1367404/1‑100 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                      <  1:1841540/100‑1 (MQ=255)
              cTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaac                                                                                      <  1:274871/100‑1 (MQ=255)
                gggTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGacaaacaa                                                                                    >  1:843401/1‑100 (MQ=255)
                        cgattttagcggtaattcgcacgaaatttgtttgccggatgttttgTCGGATGCGGCGTGATCGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTg                                                                            >  1:1943113‑M1/47‑100 (MQ=255)
                        aTTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTg                                                                            >  1:1075736/1‑100 (MQ=255)
                         ttAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGc                                                                           <  2:514608/100‑1 (MQ=255)
                          tAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCg                                                                          >  1:1909222/1‑100 (MQ=255)
                            aCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGaa                                                                        >  1:2288427/1‑100 (MQ=255)
                            aCGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGaa                                                                        >  2:1228630/1‑100 (MQ=255)
                              gTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAAtt                                                                      <  1:762697/100‑1 (MQ=255)
                              gTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAAtt                                                                      >  1:2051039/1‑100 (MQ=255)
                              gTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAAtt                                                                      >  1:319365/1‑100 (MQ=255)
                                tttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAc                                                                    >  1:1434630/1‑100 (MQ=255)
                                tttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAc                                                                    <  1:2309381/100‑1 (MQ=255)
                                 ttAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCAACAAACAAATTTCGTGCGAATTAcc                                                                   <  1:1100757/100‑1 (MQ=255)
                                 ttAAAATCTTTTGCTGTCTAGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCGTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                   <  2:906382/100‑1 (MQ=255)
                                 gcggtaattcgcacgaaatttgtttgtcggacgtagttcggatgcggcgtgaacgccttatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTAcc                                                                   <  1:794500‑M2/35‑1 (MQ=255)
                                  tAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCg                                                                  >  2:1512108/1‑100 (MQ=255)
                                   ggtaattcgcacgaaatttgtttgtcggacgtagtTCGGATAAGGCGTTCACGCCGCATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGc                                                                 <  1:794500‑M1/65‑1 (MQ=255)
                                   aaaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGc                                                                 <  1:1438733/100‑1 (MQ=255)
                                    aaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                                <  1:1420603/100‑1 (MQ=255)
                                    aaaTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCt                                                                >  1:963650/1‑100 (MQ=255)
                                      aTCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTaa                                                              <  1:2219541/100‑1 (MQ=255)
                                        cTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTaaaa                                                            >  1:780898/1‑100 (MQ=255)
                                        cTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTaaaa                                                            <  1:2180437/100‑1 (MQ=255)
                                         ttttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAt                                                           >  1:428621/1‑100 (MQ=255)
                                           ttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAATTTTCGTGCGAATTACCGCTAAAATcg                                                         <  1:1451703/100‑1 (MQ=255)
                                           ttGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcg                                                         >  2:1857510/1‑100 (MQ=255)
                                           cacgaaatttgtttgtcggacgtagttcggataaggcgatcacgccgcatccgacAAAACATCCGGCAAACAAATTTCGTGCGAATTACCGCTAAAATcg                                                         >  1:1943113‑M2/56‑100 (MQ=255)
                                             gCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATcgcg                                                       <  1:1337435/100‑1 (MQ=255)
                                              cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                      <  2:1002439/100‑1 (MQ=255)
                                              cTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGt                                                      >  1:2097402/1‑100 (MQ=255)
                                               tGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGtt                                                     >  1:1851584/1‑100 (MQ=255)
                                                  cTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGtttt                                                   >  2:763818/1‑99 (MQ=255)
                                                     gtgtGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTg                                               >  1:1714505/1‑100 (MQ=255)
                                                      tgtgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGc                                              <  1:280410/100‑1 (MQ=255)
                                                        tgCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAg                                            >  1:494031/1‑100 (MQ=255)
                                                         gCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGa                                           >  1:1599705/1‑100 (MQ=255)
                                                          ccGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGAc                                          >  1:2332428/1‑100 (MQ=255)
                                                           cGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACg                                         >  1:1829961/1‑100 (MQ=255)
                                                             gATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGca                                       <  2:1512523/100‑1 (MQ=255)
                                                              aTGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGcac                                      <  1:29947/100‑1 (MQ=255)
                                                                gTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCacac                                    >  2:147713/1‑100 (MQ=255)
                                                                 ttttGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACg                                   >  1:1380366/1‑100 (MQ=255)
                                                                   agtTCGGATAAGGCGTTCACGCCGCATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGtt                                 <  2:486926‑M1/97‑1 (MQ=255)
                                                                    gttcggataaggcgttcacgccgaatccgaACTACGTCCGACAAACAAATTTCGTGCGAGTTACCGCAAAAATCGCGTTTTCCTGCAGACGCACACGtt                                 >  1:1855691‑M2/31‑99 (MQ=255)
                                                                     gTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTg                               >  2:1528866/1‑100 (MQ=255)
                                                                      TCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGTATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGc                              <  2:1521136‑M1/100‑1 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                             >  2:1789191‑M1/1‑100 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                             >  2:307488‑M1/1‑100 (MQ=255)
                                                                       CGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCg                             >  2:1307311‑M1/1‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcgtccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  2:1456981‑M2/27‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTGCGTCCGACAAACAAATTTCGTGCGAATTACCGCTGAAATCGAGTCTTCCTGCCGACGCACACGTTTGCg                             >  2:1169967‑M2/27‑99 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  2:1807118‑M2/27‑100 (MQ=255)
                                                                        ggataaggcgttcacgccgcatccgaACTACGTCCGACAAACAAACTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  1:1372225‑M2/27‑100 (MQ=255)
                                                                        GGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGt                            >  1:1450675‑M1/1‑100 (MQ=255)
                                                                        GGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAAACGCGTTTTGCTGCAGACGCACACGTTTGCg                             <  2:1605120‑M1/99‑1 (MQ=255)
                                                                        GGATGCGGAGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCACGTATTCCTGCAGACGCACACGTTTGCGt                            <  2:1287394‑M1/100‑1 (MQ=255)
                                                                         GATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTa                           <  1:834647‑M1/100‑1 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatca                        <  2:586548/100‑1 (MQ=255)
                                                                            gcggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatca                        <  2:344937/100‑1 (MQ=255)
                                                                            aaggcgttcacgccgcatccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatca                        >  1:1837461‑M2/23‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcat                       >  1:1641884/1‑100 (MQ=255)
                                                                             cggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcat                       <  2:1938684/100‑1 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGCATTACCTCTACAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcata                      >  2:108564/1‑100 (MQ=255)
                                                                              ggcgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcata                      >  2:1845496/1‑100 (MQ=255)
                                                                                cgTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGtatcatatc                    <  1:1274584/100‑1 (MQ=255)
                                                                                  tGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAg                  <  1:159585/100‑1 (MQ=255)
                                                                                   gAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGa                 >  1:2128803/1‑100 (MQ=255)
                                                                                   gAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGa                 >  1:2359768/1‑100 (MQ=255)
                                                                                        ccTTATCCGAACTACGTCCGACAAACAAATTTCGTGCAAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGaaaaaa            <  2:147255/100‑1 (MQ=255)
                                                                                         cTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAg           <  2:2051021/100‑1 (MQ=255)
                                                                                         cTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCACGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAg           <  2:1998424/100‑1 (MQ=255)
                                                                                          ttATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAgg          <  1:200481/100‑1 (MQ=255)
                                                                                              ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCg      >  1:2387281‑M2/5‑100 (MQ=255)
                                                                                              ccgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCg      <  2:2349477‑M2/96‑1 (MQ=255)
                                                                                               cgaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCgg     <  1:256243‑M2/97‑1 (MQ=255)
                                                                                                gaACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGa    <  2:1851570‑M2/98‑1 (MQ=255)
                                                                                                 aACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGAt   <  1:1687373‑M2/99‑1 (MQ=255)
                                                                                                  aCTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGgatg  <  1:521842/100‑1 (MQ=255)
                                                                                                  aCTACGTCCGACAAACAAATTTCGTGCCAATTACCGCTAAACTCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGgatg  <  1:1274406/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CATCTTTATCACTCCTGGGTGTGAATTAACGTTTTAAAATCTTTTGCTGTCTGGTGTGCCGGATGTTTTGTCGGATGCGGCGTGAACGCCTTATCCGAACTACGTCCGACAAACAAATTTCGTGCGAATTACCGCTAAAATCGCGTTTTCCTGCAGACGCACACGTTTGCGTATCATATCAGAAAAAAGGGCCGGATG  >  NC_000913/2597616‑2597813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.